RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 RIPOR2Q9Y4F9 1068 aa14.07□□□□□ -0.16
KDM3A-216ENST00000542128 CAPZA3Q96KX2 299 aa14.07□□□□□ -0.16
KDM3A-216ENST00000542128 EYA3Q99504 573 aa14.07□□□□□ -0.16
KDM3A-216ENST00000542128 CAPS2Q9BXY5 557 aa14.07□□□□□ -0.16
KDM3A-216ENST00000542128 CCDC87Q9NVE4 849 aa14.07□□□□□ -0.16
KDM3A-216ENST00000542128 DTNBO60941 627 aa14.07□□□□□ -0.16
KDM3A-216ENST00000542128 GIGYF2Q6Y7W6 1299 aaKnown RBP14.07□□□□□ -0.16
KDM3A-216ENST00000542128 TDRD7Q8NHU6 1098 aaKnown RBP14.07□□□□□ -0.16
KDM3A-216ENST00000542128 GRM8O00222 908 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 ANKS4BQ8N8V4 417 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 KDM5DQ9BY66 1539 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 YEATS4O95619 227 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 CC2D1AQ6P1N0 951 aaPredicted RBP14.06□□□□□ -0.16
KDM3A-216ENST00000542128 IQCA1Q86XH1 822 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 XPO4Q9C0E2 1151 aaKnown RBP14.06□□□□□ -0.16
KDM3A-216ENST00000542128 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
KDM3A-216ENST00000542128 HLA-DOAP06340 250 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 PCK1P35558 622 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 FAM160A1Q05DH4 1040 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 PPFIA1Q13136 1202 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 CCDC96Q2M329 555 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 ANKRD44Q8N8A2 993 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 LINS1Q8NG48 757 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 OTUD7AQ8TE49 926 aaPredicted RBP14.06□□□□□ -0.16
KDM3A-216ENST00000542128 SAAL1Q96ER3 474 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 FAM89AQ96GI7 184 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 TCEANC2Q96MN5 208 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 EDC4Q6P2E9 1401 aaKnown RBP14.06□□□□□ -0.16
KDM3A-216ENST00000542128 TUBB2AQ13885 445 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 SPA17Q15506 151 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 ARHGAP45Q92619 1136 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 SH3GL3Q99963 347 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 TUBB2BQ9BVA1 445 aa14.06□□□□□ -0.16
KDM3A-216ENST00000542128 CDC42BPAQ5VT25 1732 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 PIK3C2GO75747 1445 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 ZNF76P36508 570 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 WWC2Q6AWC2 1192 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 SPATS2Q86XZ4 545 aaKnown RBP14.05□□□□□ -0.16
KDM3A-216ENST00000542128 CDK5RAP3Q96JB5 506 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 ZNF408Q9H9D4 720 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 SAMM50Q9Y512 469 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 SPATA31E1Q6ZUB1 1445 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 DNA2P51530 1060 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 APOBRQ0VD83 1088 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 TBC1D31Q96DN5 1066 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 CFAP58Q5T655 872 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 LMNTD2Q8IXW0 634 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 WDR66Q8TBY9 1149 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 FAM169AQ9Y6X4 670 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 NLRP1Q9C000 1473 aa14.05□□□□□ -0.16
KDM3A-216ENST00000542128 SH3TC1Q8TE82 1336 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 RNF40O75150 1001 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 ECM2O94769 699 aaPredicted RBP14.04□□□□□ -0.16
KDM3A-216ENST00000542128 HMGB1P09429 215 aaKnown RBP14.04□□□□□ -0.16
KDM3A-216ENST00000542128 FANCCQ00597 558 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 WHAMMP3Q1A5X7 153 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 CWF19L2Q2TBE0 894 aaKnown RBP14.04□□□□□ -0.16
KDM3A-216ENST00000542128 SMARCC2Q8TAQ2 1214 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 ELF1P32519 619 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 ARID5BQ14865 1188 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 DBN1Q16643 649 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 UNC5CLQ8IV45 518 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 LARGE2Q8N3Y3 721 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 FLAD1Q8NFF5 587 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 LUC7LQ9NQ29 371 aaKnown RBP14.04□□□□□ -0.16
KDM3A-216ENST00000542128 AFF2P51816 1311 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 KIF3CO14782 793 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 TRMT2AQ8IZ69 625 aaKnown RBP14.04□□□□□ -0.16
KDM3A-216ENST00000542128 BRF1Q92994 677 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 DDX21Q9NR30 783 aaKnown RBP eCLIP14.04□□□□□ -0.16
KDM3A-216ENST00000542128 KRT18P05783 430 aaKnown RBP14.04□□□□□ -0.16
KDM3A-216ENST00000542128 ZNF804AQ7Z570 1209 aa14.04□□□□□ -0.16
KDM3A-216ENST00000542128 ZNF496Q96IT1 587 aaPredicted RBP14.04□□□□□ -0.16
KDM3A-216ENST00000542128 NAPGQ99747 312 aaPredicted RBP14.04□□□□□ -0.16
KDM3A-216ENST00000542128 NAA15Q9BXJ9 866 aaKnown RBP14.04□□□□□ -0.16
KDM3A-216ENST00000542128 TTC41PQ6P2S7 1318 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 RNF168Q8IYW5 571 aaPredicted RBP14.03□□□□□ -0.16
KDM3A-216ENST00000542128 EHBP1Q8NDI1 1231 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 LEO1Q8WVC0 666 aaPredicted RBP14.03□□□□□ -0.16
KDM3A-216ENST00000542128 TACO1Q9BSH4 297 aaKnown RBP14.03□□□□□ -0.16
KDM3A-216ENST00000542128 SLC52A2Q9HAB3 445 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 ZBTB7BO15156 539 aaPredicted RBP14.03□□□□□ -0.16
KDM3A-216ENST00000542128 CDC25BP30305 580 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 RBM6P78332 1123 aaKnown RBP14.03□□□□□ -0.16
KDM3A-216ENST00000542128 CCDC6Q16204 474 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 RBM17Q96I25 401 aaKnown RBP14.03□□□□□ -0.16
KDM3A-216ENST00000542128 GUCA1BQ9UMX6 200 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 JAG2Q9Y219 1238 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 ERVK-7P63135 1459 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 IL16Q14005 1332 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 USP27XA6NNY8 438 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 CPA1P15085 419 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 GSPT1P15170 499 aaKnown RBP14.03□□□□□ -0.16
KDM3A-216ENST00000542128 TAF4BQ92750 862 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 SWAP70Q9UH65 585 aa14.03□□□□□ -0.16
KDM3A-216ENST00000542128 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
KDM3A-216ENST00000542128 ALDH1L1O75891 902 aa14.02□□□□□ -0.16
KDM3A-216ENST00000542128 CHMLP26374 656 aa14.02□□□□□ -0.16
KDM3A-216ENST00000542128 PARP10Q53GL7 1025 aa14.02□□□□□ -0.16
KDM3A-216ENST00000542128 PPP1R12CQ9BZL4 782 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms