RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 C22orf23Q9BZE7 217 aa14.97□□□□□ -0.01
LMO3-228ENST00000541846 BAZ2AQ9UIF9 1905 aaKnown RBP14.97□□□□□ -0.01
LMO3-228ENST00000541846 DDNO94850 711 aaPredicted RBP14.96□□□□□ -0.01
LMO3-228ENST00000541846 USP17L8P0C7I0 530 aa14.96□□□□□ -0.01
LMO3-228ENST00000541846 HSPD1P10809 573 aaKnown RBP14.96□□□□□ -0.01
LMO3-228ENST00000541846 HHIPL2Q6UWX4 724 aa14.96□□□□□ -0.01
LMO3-228ENST00000541846 DSCC1Q9BVC3 393 aa14.96□□□□□ -0.01
LMO3-228ENST00000541846 AATFQ9NY61 560 aaKnown RBP eCLIP14.96□□□□□ -0.01
LMO3-228ENST00000541846 SERPINA10Q9UK55 444 aa14.96□□□□□ -0.01
LMO3-228ENST00000541846 DAGLAQ9Y4D2 1042 aa14.96□□□□□ -0.01
LMO3-228ENST00000541846 GJA3Q9Y6H8 435 aa14.96□□□□□ -0.01
LMO3-228ENST00000541846 NAV1Q8NEY1 1877 aa14.95□□□□□ -0.02
LMO3-228ENST00000541846 GPR75-ASB3A0A0A6YYF3 556 aa14.95□□□□□ -0.02
LMO3-228ENST00000541846 BTDP43251 543 aa14.95□□□□□ -0.02
LMO3-228ENST00000541846 RBM25P49756 843 aaKnown RBP14.95□□□□□ -0.02
LMO3-228ENST00000541846 MTMR14Q8NCE2 650 aa14.95□□□□□ -0.02
LMO3-228ENST00000541846 ZBED3Q96IU2 234 aaPredicted RBP14.95□□□□□ -0.02
LMO3-228ENST00000541846 GPRC5DQ9NZD1 345 aa14.95□□□□□ -0.02
LMO3-228ENST00000541846 RBM8AQ9Y5S9 174 aaKnown RBP14.95□□□□□ -0.02
LMO3-228ENST00000541846 LAMB1P07942 1786 aa14.94□□□□□ -0.02
LMO3-228ENST00000541846 PRKAB2O43741 272 aa14.94□□□□□ -0.02
LMO3-228ENST00000541846 BAG3O95817 575 aa14.94□□□□□ -0.02
LMO3-228ENST00000541846 GNAT2P19087 354 aa14.94□□□□□ -0.02
LMO3-228ENST00000541846 HSPA4P34932 840 aa14.94□□□□□ -0.02
LMO3-228ENST00000541846 CRKP46108 304 aa14.94□□□□□ -0.02
LMO3-228ENST00000541846 PPP4CP60510 307 aa14.94□□□□□ -0.02
LMO3-228ENST00000541846 TEKT1Q969V4 418 aa14.94□□□□□ -0.02
LMO3-228ENST00000541846 NOL10Q9BSC4 688 aaKnown RBP14.94□□□□□ -0.02
LMO3-228ENST00000541846 CNOT7Q9UIV1 285 aaKnown RBP14.94□□□□□ -0.02
LMO3-228ENST00000541846 SLC4A4Q9Y6R1 1079 aa14.94□□□□□ -0.02
LMO3-228ENST00000541846 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
LMO3-228ENST00000541846 GSG1L2A8MUP6 293 aa14.93□□□□□ -0.02
LMO3-228ENST00000541846 PATL2C9JE40 543 aaKnown RBP14.93□□□□□ -0.02
LMO3-228ENST00000541846 MCCP23508 829 aa14.93□□□□□ -0.02
LMO3-228ENST00000541846 NECTIN1Q15223 517 aa14.93□□□□□ -0.02
LMO3-228ENST00000541846 APOBEC3HQ6NTF7 200 aaKnown RBP14.93□□□□□ -0.02
LMO3-228ENST00000541846 OGFOD1Q8N543 542 aa14.93□□□□□ -0.02
LMO3-228ENST00000541846 ZDHHC15Q96MV8 337 aa14.93□□□□□ -0.02
LMO3-228ENST00000541846 CRNKL1Q9BZJ0 848 aaKnown RBP14.93□□□□□ -0.02
LMO3-228ENST00000541846 EPB41L4AQ9HCS5 686 aaPredicted RBP14.93□□□□□ -0.02
LMO3-228ENST00000541846 HDAC9Q9UKV0 1011 aa14.93□□□□□ -0.02
LMO3-228ENST00000541846 MYH1P12882 1939 aa14.93□□□□□ -0.02
LMO3-228ENST00000541846 RPAP1Q9BWH6 1393 aaPredicted RBP14.93□□□□□ -0.02
LMO3-228ENST00000541846 DDX60LQ5H9U9 1706 aaKnown RBP14.92□□□□□ -0.02
LMO3-228ENST00000541846 POTECB2RU33 542 aa14.92□□□□□ -0.02
LMO3-228ENST00000541846 RHBDL3P58872 404 aa14.92□□□□□ -0.02
LMO3-228ENST00000541846 ALX1Q15699 326 aa14.92□□□□□ -0.02
LMO3-228ENST00000541846 CERS3Q8IU89 383 aa14.92□□□□□ -0.02
LMO3-228ENST00000541846 MICALL2Q8IY33 904 aa14.92□□□□□ -0.02
LMO3-228ENST00000541846 IFNL3Q8IZI9 196 aa14.92□□□□□ -0.02
LMO3-228ENST00000541846 SH3RF3Q8TEJ3 882 aaPredicted RBP14.92□□□□□ -0.02
LMO3-228ENST00000541846 SDR42E1Q8WUS8 393 aa14.92□□□□□ -0.02
LMO3-228ENST00000541846 PALD1Q9ULE6 856 aa14.92□□□□□ -0.02
LMO3-228ENST00000541846 PCDHAC2Q9Y5I4 1007 aa14.92□□□□□ -0.02
LMO3-228ENST00000541846 ZMYM6O95789 1325 aa14.92□□□□□ -0.02
LMO3-228ENST00000541846 SHTN1A0MZ66 631 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 H7C1D1 291 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 SLC27A2O14975 620 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 FGAP02671 866 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 APPP05067 770 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 PLCG2P16885 1265 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 EPS15P42566 896 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 CFAP100Q494V2 611 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 CREB3L3Q68CJ9 461 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 KCNB2Q92953 911 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 MYOZ2Q9NPC6 264 aa14.91□□□□□ -0.02
LMO3-228ENST00000541846 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
LMO3-228ENST00000541846 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
LMO3-228ENST00000541846 RBM5P52756 815 aaKnown RBP eCLIP14.9□□□□□ -0.02
LMO3-228ENST00000541846 TEX11Q8IYF3 940 aa14.9□□□□□ -0.02
LMO3-228ENST00000541846 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
LMO3-228ENST00000541846 PRMT6Q96LA8 375 aaPredicted RBP14.9□□□□□ -0.02
LMO3-228ENST00000541846 KIF2CQ99661 725 aa14.9□□□□□ -0.02
LMO3-228ENST00000541846 NAPBQ9H115 298 aa14.9□□□□□ -0.02
LMO3-228ENST00000541846 CTNNA3Q9UI47 895 aa14.9□□□□□ -0.02
LMO3-228ENST00000541846 RBM19Q9Y4C8 960 aaKnown RBP14.9□□□□□ -0.02
LMO3-228ENST00000541846 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
LMO3-228ENST00000541846 EGFRP00533 1210 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 CYP21A2P08686 494 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 TDO2P48775 406 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 ANAPC15P60006 121 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 DLGAP5Q15398 846 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 CDC42EP5Q6NZY7 148 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 GIMAP6Q6P9H5 292 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 NACAP1Q9BZK3 213 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 ADARB2Q9NS39 739 aaKnown RBP14.89□□□□□ -0.03
LMO3-228ENST00000541846 ATP8A2Q9NTI2 1148 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 USP40Q9NVE5 1235 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 HACL1Q9UJ83 578 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 TAF6LQ9Y6J9 622 aa14.89□□□□□ -0.03
LMO3-228ENST00000541846 IQCA1LA6NCM1 817 aa14.88□□□□□ -0.03
LMO3-228ENST00000541846 WNT10BO00744 389 aa14.88□□□□□ -0.03
LMO3-228ENST00000541846 LMOD1P29536 600 aaPredicted RBP14.88□□□□□ -0.03
LMO3-228ENST00000541846 USP5P45974 858 aa14.88□□□□□ -0.03
LMO3-228ENST00000541846 HIRAP54198 1017 aaPredicted RBP14.88□□□□□ -0.03
LMO3-228ENST00000541846 RNF20Q5VTR2 975 aa14.88□□□□□ -0.03
LMO3-228ENST00000541846 SAMD7Q7Z3H4 446 aa14.88□□□□□ -0.03
LMO3-228ENST00000541846 TGFBRAP1Q8WUH2 860 aa14.88□□□□□ -0.03
LMO3-228ENST00000541846 IL17RAQ96F46 866 aa14.88□□□□□ -0.03
LMO3-228ENST00000541846 DCP1AQ9NPI6 582 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms