RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 GOLGA6L9A6NEM1 432 aa7.1□□□□□ -1.27
DMD-228ENST00000541735 HMGB1P09429 215 aaKnown RBP7.1□□□□□ -1.27
DMD-228ENST00000541735 TRAF1Q13077 416 aa7.1□□□□□ -1.27
DMD-228ENST00000541735 POMGNT1Q8WZA1 660 aa7.1□□□□□ -1.27
DMD-228ENST00000541735 RMDN2Q96LZ7 410 aa7.1□□□□□ -1.27
DMD-228ENST00000541735 PDIA4P13667 645 aaKnown RBP7.1□□□□□ -1.27
DMD-228ENST00000541735 PTPN14Q15678 1187 aa7.1□□□□□ -1.27
DMD-228ENST00000541735 HS1BP3Q53T59 392 aa7.1□□□□□ -1.27
DMD-228ENST00000541735 PLVAPQ9BX97 442 aa7.1□□□□□ -1.27
DMD-228ENST00000541735 WIZO95785 1651 aa7.1□□□□□ -1.27
DMD-228ENST00000541735 ATAD2Q6PL18 1390 aa7.1□□□□□ -1.27
DMD-228ENST00000541735 ZNF174Q15697 407 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 TGFBRAP1Q8WUH2 860 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 MAPK8IP1Q9UQF2 711 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 PLEKHG3A1L390 1219 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 PLCG2P16885 1265 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 NKX1-1Q15270 411 aaPredicted RBP7.09□□□□□ -1.27
DMD-228ENST00000541735 DNAJC21Q5F1R6 531 aaKnown RBP7.09□□□□□ -1.27
DMD-228ENST00000541735 EVI5LQ96CN4 794 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 RPS6KC1Q96S38 1066 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 ARHGEF35A5YM69 484 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 HIBADHP31937 336 aaKnown RBP7.09□□□□□ -1.27
DMD-228ENST00000541735 MRE11P49959 708 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 KARSQ15046 597 aaKnown RBP7.09□□□□□ -1.27
DMD-228ENST00000541735 CWF19L2Q2TBE0 894 aaKnown RBP7.09□□□□□ -1.27
DMD-228ENST00000541735 CEP112Q8N8E3 955 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 PARP2Q9UGN5 583 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 ZBTB7AO95365 584 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 FAM102BQ5T8I3 360 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 ANKRD2Q9GZV1 360 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 hCG_1642624A0A1W2PR95 340 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 ZSCAN12O43309 604 aa7.09□□□□□ -1.27
DMD-228ENST00000541735 MYLK4Q86YV6 388 aaPredicted RBP7.09□□□□□ -1.27
DMD-228ENST00000541735 CKAP4Q07065 602 aaKnown RBP7.09□□□□□ -1.28
DMD-228ENST00000541735 SEPT6Q14141 434 aa7.09□□□□□ -1.28
DMD-228ENST00000541735 MAP9Q49MG5 647 aa7.09□□□□□ -1.28
DMD-228ENST00000541735 TTC6Q86TZ1 520 aa7.09□□□□□ -1.28
DMD-228ENST00000541735 KIAA1524Q8TCG1 905 aa7.09□□□□□ -1.28
DMD-228ENST00000541735 AP5M1Q9H0R1 490 aa7.09□□□□□ -1.28
DMD-228ENST00000541735 ARMT1Q9H993 441 aa7.09□□□□□ -1.28
DMD-228ENST00000541735 PIDD1Q9HB75 910 aa7.09□□□□□ -1.28
DMD-228ENST00000541735 UBN1Q9NPG3 1134 aa7.09□□□□□ -1.28
DMD-228ENST00000541735 MKRN1Q9UHC7 482 aaKnown RBP7.09□□□□□ -1.28
DMD-228ENST00000541735 ZHX1Q9UKY1 873 aaPredicted RBP7.09□□□□□ -1.28
DMD-228ENST00000541735 TOP2AP11388 1531 aaKnown RBP7.08□□□□□ -1.28
DMD-228ENST00000541735 SLC1A4P43007 532 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 VPS52Q8N1B4 723 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 IFT81Q8WYA0 676 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 C16orf45Q96MC5 204 aaPredicted RBP7.08□□□□□ -1.28
DMD-228ENST00000541735 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 USP25Q9UHP3 1055 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 AKT3Q9Y243 479 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 FRMPD2Q68DX3 1309 aaPredicted RBP7.08□□□□□ -1.28
DMD-228ENST00000541735 ATP2A1O14983 1001 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 TXKP42681 527 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 SYKP43405 635 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 SLC9A5Q14940 896 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 SMC6Q96SB8 1091 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 TRIM7Q9C029 511 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 TTF2Q9UNY4 1162 aaKnown RBP7.08□□□□□ -1.28
DMD-228ENST00000541735 TNNI1P19237 187 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 SLC12A1Q13621 1099 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 CDAN1Q8IWY9 1227 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 ZNF594Q96JF6 807 aaPredicted RBP7.08□□□□□ -1.28
DMD-228ENST00000541735 DYNC1I1O14576 645 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 MBD4O95243 580 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 KRT2P35908 639 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 CCDC102BQ68D86 513 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 Q6ZUG5 572 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 USP40Q9NVE5 1235 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 EPRSP07814 1512 aaKnown RBP7.08□□□□□ -1.28
DMD-228ENST00000541735 CCDC66A2RUB6 948 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 PDE4DQ08499 809 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 IFI16Q16666 785 aaKnown RBP7.08□□□□□ -1.28
DMD-228ENST00000541735 PPP4R3BQ5MIZ7 849 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 TNPO1Q92973 898 aaKnown RBP7.08□□□□□ -1.28
DMD-228ENST00000541735 TMEM106CQ9BVX2 250 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 TBC1D12O60347 775 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 MYBP10242 640 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 CASP2P42575 452 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 IL1RL1Q01638 556 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 IDI1Q13907 227 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 RPAP2Q8IXW5 612 aaPredicted RBP7.08□□□□□ -1.28
DMD-228ENST00000541735 GDAP1Q8TB36 358 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 SELENOOQ9BVL4 669 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 ECHDC1Q9NTX5 307 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 RASAL2Q9UJF2 1139 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 NUB1Q9Y5A7 615 aa7.08□□□□□ -1.28
DMD-228ENST00000541735 SPOPO43791 374 aa7.07□□□□□ -1.28
DMD-228ENST00000541735 PDE6AP16499 860 aa7.07□□□□□ -1.28
DMD-228ENST00000541735 UBXN2AP68543 259 aa7.07□□□□□ -1.28
DMD-228ENST00000541735 ITIH3Q06033 890 aa7.07□□□□□ -1.28
DMD-228ENST00000541735 DAAM2Q86T65 1068 aa7.07□□□□□ -1.28
DMD-228ENST00000541735 TPH2Q8IWU9 490 aa7.07□□□□□ -1.28
DMD-228ENST00000541735 PGBD3Q8N328 593 aa7.07□□□□□ -1.28
DMD-228ENST00000541735 CCDC110Q8TBZ0 833 aa7.07□□□□□ -1.28
DMD-228ENST00000541735 NUCKS1Q9H1E3 243 aaKnown RBP7.07□□□□□ -1.28
DMD-228ENST00000541735 THRAP3Q9Y2W1 955 aaKnown RBP7.07□□□□□ -1.28
DMD-228ENST00000541735 VWA3AA6NCI4 1184 aa7.07□□□□□ -1.28
DMD-228ENST00000541735 RAD17O75943 681 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms