RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.4■□□□□ 0.38
SUDS3-203ENST00000541591 XAGE2Q96GT9 111 aa17.4■□□□□ 0.38
SUDS3-203ENST00000541591 NEUROD6Q96NK8 337 aa17.4■□□□□ 0.38
SUDS3-203ENST00000541591 PTPN18Q99952 460 aa17.4■□□□□ 0.38
SUDS3-203ENST00000541591 GNL3LQ9NVN8 582 aaKnown RBP17.4■□□□□ 0.38
SUDS3-203ENST00000541591 FBXO3Q9UK99 471 aa17.4■□□□□ 0.38
SUDS3-203ENST00000541591 FKTNO75072 461 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 GNAI2P04899 355 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 SLURP2P0DP57 97 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 MAP3K9P80192 1104 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 CRHR2Q13324 411 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 HHIPL2Q6UWX4 724 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 ZFPM1Q8IX07 1006 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 WRNIP1Q96S55 665 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 ABCF2Q9UG63 623 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 DENND2AQ9ULE3 1009 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 HPS5Q9UPZ3 1129 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 SNCAIPQ9Y6H5 919 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 MYH1P12882 1939 aa17.39■□□□□ 0.37
SUDS3-203ENST00000541591 RLBP1P12271 317 aa17.38■□□□□ 0.37
SUDS3-203ENST00000541591 USP40Q9NVE5 1235 aa17.38■□□□□ 0.37
SUDS3-203ENST00000541591 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
SUDS3-203ENST00000541591 SUGT1Q9Y2Z0 365 aa17.38■□□□□ 0.37
SUDS3-203ENST00000541591 CSADQ9Y600 493 aa17.38■□□□□ 0.37
SUDS3-203ENST00000541591 CCL15-CCL14A0A0B4J2E2 113 aa17.37■□□□□ 0.37
SUDS3-203ENST00000541591 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
SUDS3-203ENST00000541591 INPP5BP32019 993 aa17.37■□□□□ 0.37
SUDS3-203ENST00000541591 CAP1Q01518 475 aa17.37■□□□□ 0.37
SUDS3-203ENST00000541591 MLLT1Q03111 559 aaPredicted RBP17.37■□□□□ 0.37
SUDS3-203ENST00000541591 MTX1Q13505 466 aa17.37■□□□□ 0.37
SUDS3-203ENST00000541591 CCL15Q16663 113 aa17.37■□□□□ 0.37
SUDS3-203ENST00000541591 CD99L2Q8TCZ2 262 aa17.37■□□□□ 0.37
SUDS3-203ENST00000541591 BRI3BPQ8WY22 251 aa17.37■□□□□ 0.37
SUDS3-203ENST00000541591 FAM198AQ9UFP1 575 aa17.37■□□□□ 0.37
SUDS3-203ENST00000541591 RBBP6Q7Z6E9 1792 aaKnown RBP17.37■□□□□ 0.37
SUDS3-203ENST00000541591 TBC1D9Q6ZT07 1266 aa17.36■□□□□ 0.37
SUDS3-203ENST00000541591 FAM83AQ86UY5 434 aa17.36■□□□□ 0.37
SUDS3-203ENST00000541591 DZIP1Q86YF9 867 aaKnown RBP17.36■□□□□ 0.37
SUDS3-203ENST00000541591 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
SUDS3-203ENST00000541591 MS4A4AQ96JQ5 239 aa17.36■□□□□ 0.37
SUDS3-203ENST00000541591 RPAP1Q9BWH6 1393 aaPredicted RBP17.36■□□□□ 0.37
SUDS3-203ENST00000541591 FTSJ3Q8IY81 847 aaKnown RBP17.35■□□□□ 0.37
SUDS3-203ENST00000541591 FAM43AQ8N2R8 423 aa17.35■□□□□ 0.37
SUDS3-203ENST00000541591 MRIQ9BWK5 157 aa17.35■□□□□ 0.37
SUDS3-203ENST00000541591 TRIM17Q9Y577 477 aa17.35■□□□□ 0.37
SUDS3-203ENST00000541591 SALL1Q9NSC2 1324 aa17.35■□□□□ 0.37
SUDS3-203ENST00000541591 HTTP42858 3142 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 ALDH1A1P00352 501 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 RGS3P49796 1198 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
SUDS3-203ENST00000541591 PICALMQ13492 652 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 GORABQ5T7V8 394 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 PDE4DIPQ5VU43 2346 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 FAM151AQ8WW52 585 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 CFHR5Q9BXR6 569 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 ZNF341Q9BYN7 854 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 HMG20BQ9P0W2 317 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
SUDS3-203ENST00000541591 CENPFP49454 3210 aa17.33■□□□□ 0.37
SUDS3-203ENST00000541591 SPDYE5A6NIY4 337 aa17.33■□□□□ 0.36
SUDS3-203ENST00000541591 UNCXA6NJT0 531 aa17.33■□□□□ 0.36
SUDS3-203ENST00000541591 SEMA3EO15041 775 aa17.33■□□□□ 0.36
SUDS3-203ENST00000541591 BTDP43251 543 aa17.33■□□□□ 0.36
SUDS3-203ENST00000541591 INHBEP58166 350 aa17.33■□□□□ 0.36
SUDS3-203ENST00000541591 OS9Q13438 667 aaPredicted RBP17.33■□□□□ 0.36
SUDS3-203ENST00000541591 MVPQ14764 893 aaKnown RBP17.33■□□□□ 0.36
SUDS3-203ENST00000541591 FKBP1CQ5VVH2 108 aa17.33■□□□□ 0.36
SUDS3-203ENST00000541591 PANK1Q8TE04 598 aa17.33■□□□□ 0.36
SUDS3-203ENST00000541591 ZNF384Q8TF68 577 aa17.33■□□□□ 0.36
SUDS3-203ENST00000541591 SNRKQ9NRH2 765 aa17.33■□□□□ 0.36
SUDS3-203ENST00000541591 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 DOCK3Q8IZD9 2030 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 GAKO14976 1311 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 ZBED9Q6R2W3 1325 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 MYH7P12883 1935 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 TESPA1A2RU30 521 aaPredicted RBP17.32■□□□□ 0.36
SUDS3-203ENST00000541591 IRF6O14896 467 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 MCAMP43121 646 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 RGS19P49795 217 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 MECOMQ03112 1051 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 TAF1CQ15572 869 aaPredicted RBP17.32■□□□□ 0.36
SUDS3-203ENST00000541591 DCAF15Q66K64 600 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 OTOP1Q7RTM1 612 aa17.32■□□□□ 0.36
SUDS3-203ENST00000541591 DDX4Q9NQI0 724 aaKnown RBP17.32■□□□□ 0.36
SUDS3-203ENST00000541591 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.32■□□□□ 0.36
SUDS3-203ENST00000541591 MYH8P13535 1937 aa17.31■□□□□ 0.36
SUDS3-203ENST00000541591 MROH7-TTC4A0A0A0MT08 1334 aa17.31■□□□□ 0.36
SUDS3-203ENST00000541591 FAM196BA6NMK8 535 aa17.31■□□□□ 0.36
SUDS3-203ENST00000541591 GTF2A2P52657 109 aa17.31■□□□□ 0.36
SUDS3-203ENST00000541591 OTUD7BQ6GQQ9 843 aa17.31■□□□□ 0.36
SUDS3-203ENST00000541591 FBXO46Q6PJ61 603 aaPredicted RBP17.31■□□□□ 0.36
SUDS3-203ENST00000541591 ERICH6Q7L0X2 663 aa17.31■□□□□ 0.36
SUDS3-203ENST00000541591 ZSCAN29Q8IWY8 852 aaPredicted RBP17.31■□□□□ 0.36
SUDS3-203ENST00000541591 ZGPATQ8N5A5 531 aaKnown RBP17.31■□□□□ 0.36
SUDS3-203ENST00000541591 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.31■□□□□ 0.36
SUDS3-203ENST00000541591 SPATA5Q8NB90 893 aa17.31■□□□□ 0.36
SUDS3-203ENST00000541591 DBNDD2Q9BQY9 259 aa17.31■□□□□ 0.36
SUDS3-203ENST00000541591 NAV1Q8NEY1 1877 aa17.31■□□□□ 0.36
SUDS3-203ENST00000541591 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms