RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 GSPT1P15170 499 aaKnown RBP9.97□□□□□ -0.81
LMO3-226ENST00000541589 SCARF1Q14162 830 aa9.97□□□□□ -0.81
LMO3-226ENST00000541589 ANGEL2Q5VTE6 544 aaKnown RBP9.97□□□□□ -0.81
LMO3-226ENST00000541589 ZNF454Q8N9F8 522 aa9.97□□□□□ -0.81
LMO3-226ENST00000541589 OTUD7AQ8TE49 926 aaPredicted RBP9.97□□□□□ -0.81
LMO3-226ENST00000541589 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
LMO3-226ENST00000541589 PITPNM2Q9BZ72 1349 aa9.96□□□□□ -0.81
LMO3-226ENST00000541589 UBE2Q2LH0YL09 131 aa9.96□□□□□ -0.82
LMO3-226ENST00000541589 PDE1AP54750 535 aa9.96□□□□□ -0.82
LMO3-226ENST00000541589 NLRP10Q86W26 655 aa9.96□□□□□ -0.82
LMO3-226ENST00000541589 RHPN1Q8TCX5 695 aa9.96□□□□□ -0.82
LMO3-226ENST00000541589 KAZALD1Q96I82 304 aa9.96□□□□□ -0.82
LMO3-226ENST00000541589 TBC1D32Q96NH3 1257 aa9.96□□□□□ -0.82
LMO3-226ENST00000541589 BICC1Q9H694 974 aaKnown RBP9.96□□□□□ -0.82
LMO3-226ENST00000541589 NSFL1CQ9UNZ2 370 aaKnown RBP9.96□□□□□ -0.82
LMO3-226ENST00000541589 AOX1Q06278 1338 aa9.96□□□□□ -0.82
LMO3-226ENST00000541589 RBBP6Q7Z6E9 1792 aaKnown RBP9.95□□□□□ -0.82
LMO3-226ENST00000541589 DPYSL4O14531 572 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 MX1P20591 662 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 PSEN2P49810 448 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 MFAP1P55081 439 aaKnown RBP9.95□□□□□ -0.82
LMO3-226ENST00000541589 GPSM2P81274 684 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 ERICH6Q7L0X2 663 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 OTOP1Q7RTM1 612 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 ERC1Q8IUD2 1116 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 AGBL3Q8NEM8 1001 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 GMLQ99445 158 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 STAP2Q9UGK3 403 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 TAF1P21675 1872 aa9.95□□□□□ -0.82
LMO3-226ENST00000541589 SCN9AQ15858 1988 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 ATP5J2-PTCD1G3V325 749 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 C6orf229H3BNL8 230 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 DLL1O00548 723 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 EN2P19622 333 aaPredicted RBP9.94□□□□□ -0.82
LMO3-226ENST00000541589 SREBF2Q12772 1141 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 DMRTA1Q5VZB9 504 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 TBC1D9Q6ZT07 1266 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 CCDC191Q8NCU4 936 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 CELF1Q92879 486 aaKnown RBP9.94□□□□□ -0.82
LMO3-226ENST00000541589 ARMC5Q96C12 935 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 EYA3Q99504 573 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 CWC25Q9NXE8 425 aaPredicted RBP9.94□□□□□ -0.82
LMO3-226ENST00000541589 TRIM17Q9Y577 477 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 SH3TC1Q8TE82 1336 aa9.94□□□□□ -0.82
LMO3-226ENST00000541589 DDX60Q8IY21 1712 aaKnown RBP9.94□□□□□ -0.82
LMO3-226ENST00000541589 H7C1W4 665 aa9.93□□□□□ -0.82
LMO3-226ENST00000541589 SDSP20132 328 aa9.93□□□□□ -0.82
LMO3-226ENST00000541589 CASP7P55210 303 aa9.93□□□□□ -0.82
LMO3-226ENST00000541589 OS9Q13438 667 aaPredicted RBP9.93□□□□□ -0.82
LMO3-226ENST00000541589 SF3B3Q15393 1217 aaKnown RBP9.93□□□□□ -0.82
LMO3-226ENST00000541589 RABL6Q3YEC7 729 aaPredicted RBP9.93□□□□□ -0.82
LMO3-226ENST00000541589 RSBN1LQ6PCB5 846 aaPredicted RBP9.93□□□□□ -0.82
LMO3-226ENST00000541589 UBE3BQ7Z3V4 1068 aa9.93□□□□□ -0.82
LMO3-226ENST00000541589 TBC1D16Q8TBP0 767 aa9.93□□□□□ -0.82
LMO3-226ENST00000541589 C22orf23Q9BZE7 217 aa9.93□□□□□ -0.82
LMO3-226ENST00000541589 BCL11AQ9H165 835 aa9.93□□□□□ -0.82
LMO3-226ENST00000541589 MYOZ2Q9NPC6 264 aa9.93□□□□□ -0.82
LMO3-226ENST00000541589 TRMT112Q9UI30 125 aaKnown RBP9.93□□□□□ -0.82
LMO3-226ENST00000541589 COL4A1P02462 1669 aa9.93□□□□□ -0.82
LMO3-226ENST00000541589 KIAA0100Q14667 2235 aaKnown RBP9.93□□□□□ -0.82
LMO3-226ENST00000541589 ALDH1A1P00352 501 aa9.92□□□□□ -0.82
LMO3-226ENST00000541589 TRIM28Q13263 835 aaKnown RBP9.92□□□□□ -0.82
LMO3-226ENST00000541589 TCIRG1Q13488 830 aa9.92□□□□□ -0.82
LMO3-226ENST00000541589 HSP90AB3PQ58FF7 597 aa9.92□□□□□ -0.82
LMO3-226ENST00000541589 EPHA10Q5JZY3 1008 aa9.92□□□□□ -0.82
LMO3-226ENST00000541589 PRAMEF18Q5VWM3 479 aa9.92□□□□□ -0.82
LMO3-226ENST00000541589 CASC1Q6TDU7 716 aa9.92□□□□□ -0.82
LMO3-226ENST00000541589 ISCA1Q9BUE6 129 aa9.92□□□□□ -0.82
LMO3-226ENST00000541589 IL1RAPL2Q9NP60 686 aa9.92□□□□□ -0.82
LMO3-226ENST00000541589 PODXL2Q9NZ53 605 aa9.92□□□□□ -0.82
LMO3-226ENST00000541589 SCAF8Q9UPN6 1271 aaKnown RBP9.92□□□□□ -0.82
LMO3-226ENST00000541589 PTPN22Q9Y2R2 807 aa9.92□□□□□ -0.82
LMO3-226ENST00000541589 RBM25P49756 843 aaKnown RBP9.91□□□□□ -0.82
LMO3-226ENST00000541589 PTPN12Q05209 780 aaKnown RBP9.91□□□□□ -0.82
LMO3-226ENST00000541589 G3BP1Q13283 466 aaKnown RBP eCLIP9.91□□□□□ -0.82
LMO3-226ENST00000541589 E2F4Q16254 413 aa9.91□□□□□ -0.82
LMO3-226ENST00000541589 CLASRPQ8N2M8 674 aaKnown RBP9.91□□□□□ -0.82
LMO3-226ENST00000541589 COPRSQ9NQ92 184 aa9.91□□□□□ -0.82
LMO3-226ENST00000541589 TTC41PQ6P2S7 1318 aa9.91□□□□□ -0.82
LMO3-226ENST00000541589 USP17L8P0C7I0 530 aa9.91□□□□□ -0.82
LMO3-226ENST00000541589 LDLRAD1Q5T700 205 aa9.91□□□□□ -0.82
LMO3-226ENST00000541589 SPRYD7Q5W111 196 aa9.91□□□□□ -0.82
LMO3-226ENST00000541589 KCNK17Q96T54 332 aa9.91□□□□□ -0.82
LMO3-226ENST00000541589 ZC3H12CQ9C0D7 883 aaKnown RBP9.91□□□□□ -0.82
LMO3-226ENST00000541589 WDR70Q9NW82 654 aa9.91□□□□□ -0.82
LMO3-226ENST00000541589 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
LMO3-226ENST00000541589 PA2G4Q9UQ80 394 aaKnown RBP9.91□□□□□ -0.82
LMO3-226ENST00000541589 PCDHGA10Q9Y5H3 936 aa9.91□□□□□ -0.82
LMO3-226ENST00000541589 TRIOBPQ9H2D6 2365 aa9.9□□□□□ -0.82
LMO3-226ENST00000541589 RANBP2P49792 3224 aaKnown RBP9.9□□□□□ -0.82
LMO3-226ENST00000541589 RFX5P48382 616 aaPredicted RBP9.9□□□□□ -0.83
LMO3-226ENST00000541589 INHBEP58166 350 aa9.9□□□□□ -0.83
LMO3-226ENST00000541589 FOXO4P98177 505 aa9.9□□□□□ -0.83
LMO3-226ENST00000541589 CAP1Q01518 475 aa9.9□□□□□ -0.83
LMO3-226ENST00000541589 BECN1Q14457 450 aa9.9□□□□□ -0.83
LMO3-226ENST00000541589 NBPF9Q3BBW0 867 aa9.9□□□□□ -0.83
LMO3-226ENST00000541589 ADGRD1Q6QNK2 874 aa9.9□□□□□ -0.83
LMO3-226ENST00000541589 JARID2Q92833 1246 aaPredicted RBP9.9□□□□□ -0.83
LMO3-226ENST00000541589 ZDHHC16Q969W1 377 aa9.9□□□□□ -0.83
LMO3-226ENST00000541589 A0A0C4DFX4 3053 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms