RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, human

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-218	ENST00000541586	NECTIN1	Q15223	517 aa		33.22	■■■□□ 2.91
CCM2-218	ENST00000541586	MYOZ2	Q9NPC6	264 aa		33.22	■■■□□ 2.91
CCM2-218	ENST00000541586	PCDHAC2	Q9Y5I4	1007 aa		33.22	■■■□□ 2.91
CCM2-218	ENST00000541586	POTEC	B2RU33	542 aa		33.21	■■■□□ 2.91
CCM2-218	ENST00000541586	PDE6A	P16499	860 aa		33.21	■■■□□ 2.91
CCM2-218	ENST00000541586	CRK	P46108	304 aa		33.21	■■■□□ 2.91
CCM2-218	ENST00000541586	UBE3C	Q15386	1083 aa		33.21	■■■□□ 2.91
CCM2-218	ENST00000541586	CFAP100	Q494V2	611 aa		33.21	■■■□□ 2.91
CCM2-218	ENST00000541586	ZNF384	Q8TF68	577 aa		33.21	■■■□□ 2.91
CCM2-218	ENST00000541586	TEKT1	Q969V4	418 aa		33.21	■■■□□ 2.91
CCM2-218	ENST00000541586	EGFR	P00533	1210 aa		33.2	■■■□□ 2.91
CCM2-218	ENST00000541586	ZNF280A	P59817	542 aa	Predicted RBP	33.2	■■■□□ 2.91
CCM2-218	ENST00000541586	SNX14	Q9Y5W7	946 aa		33.2	■■■□□ 2.91
CCM2-218	ENST00000541586	IQCA1L	A6NCM1	817 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	RASEF	Q8IZ41	740 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	KCNB2	Q92953	911 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	PUS7L	Q9H0K6	701 aa	Known RBP	33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	NMRK2	Q9NPI5	230 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	SERPINA10	Q9UK55	444 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	TCRBV5S4A2T	A0A5A2	114 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	CYP7A1	P22680	504 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	EPHX2	P34913	555 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	GSTO1	P78417	241 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	HSCB	Q8IWL3	235 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	ZNF532	Q9HCE3	1301 aa		33.19	■■■□□ 2.9
CCM2-218	ENST00000541586	CD2BP2	O95400	341 aa	Known RBP	33.18	■■■□□ 2.9
CCM2-218	ENST00000541586	VEGFA	P15692	232 aa	Predicted RBP	33.18	■■■□□ 2.9
CCM2-218	ENST00000541586	DLGAP5	Q15398	846 aa		33.18	■■■□□ 2.9
CCM2-218	ENST00000541586	SLF2	Q8IX21	1173 aa		33.18	■■■□□ 2.9
CCM2-218	ENST00000541586	ADARB2	Q9NS39	739 aa	Known RBP	33.18	■■■□□ 2.9
CCM2-218	ENST00000541586	CREB3L3	Q68CJ9	461 aa		33.17	■■■□□ 2.9
CCM2-218	ENST00000541586	TRPM4	Q8TD43	1214 aa		33.17	■■■□□ 2.9
CCM2-218	ENST00000541586	GPBP1L1	Q9HC44	474 aa	Predicted RBP	33.17	■■■□□ 2.9
CCM2-218	ENST00000541586	KIF4B	Q2VIQ3	1234 aa		33.16	■■■□□ 2.9
CCM2-218	ENST00000541586	VPS53	Q5VIR6	699 aa		33.16	■■■□□ 2.9
CCM2-218	ENST00000541586	LDHC	P07864	332 aa		33.16	■■■□□ 2.9
CCM2-218	ENST00000541586	HDLBP	Q00341	1268 aa	Known RBP	33.16	■■■□□ 2.9
CCM2-218	ENST00000541586	EAPP	Q56P03	285 aa	Predicted RBP	33.16	■■■□□ 2.9
CCM2-218	ENST00000541586	HHIPL2	Q6UWX4	724 aa		33.16	■■■□□ 2.9
CCM2-218	ENST00000541586	DSCC1	Q9BVC3	393 aa		33.16	■■■□□ 2.9
CCM2-218	ENST00000541586	MRI	Q9BWK5	157 aa		33.16	■■■□□ 2.9
CCM2-218	ENST00000541586	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.16	■■■□□ 2.9
CCM2-218	ENST00000541586	HSPD1	P10809	573 aa	Known RBP	33.15	■■■□□ 2.9
CCM2-218	ENST00000541586	MMP14	P50281	582 aa		33.15	■■■□□ 2.9
CCM2-218	ENST00000541586	ADGRA1	Q86SQ6	560 aa		33.15	■■■□□ 2.9
CCM2-218	ENST00000541586	PRMT6	Q96LA8	375 aa	Predicted RBP	33.15	■■■□□ 2.9
CCM2-218	ENST00000541586	DAGLA	Q9Y4D2	1042 aa		33.15	■■■□□ 2.9
CCM2-218	ENST00000541586		U3KPZ7	1027 aa	Predicted RBP	33.15	■■■□□ 2.9
CCM2-218	ENST00000541586	SLC27A2	O14975	620 aa		33.14	■■■□□ 2.9
CCM2-218	ENST00000541586	NBPF9	Q3BBW0	867 aa		33.14	■■■□□ 2.9
CCM2-218	ENST00000541586	MROH7-TTC4	A0A0A0MT08	1334 aa		33.13	■■■□□ 2.89
CCM2-218	ENST00000541586	WNT10B	O00744	389 aa		33.13	■■■□□ 2.89
CCM2-218	ENST00000541586	GPAA1	O43292	621 aa		33.13	■■■□□ 2.89
CCM2-218	ENST00000541586	HIRA	P54198	1017 aa	Predicted RBP	33.13	■■■□□ 2.89
CCM2-218	ENST00000541586	MIGA1	Q8NAN2	632 aa		33.13	■■■□□ 2.89
CCM2-218	ENST00000541586	ZDHHC15	Q96MV8	337 aa		33.13	■■■□□ 2.89
CCM2-218	ENST00000541586	WDR90	Q96KV7	1748 aa		33.12	■■■□□ 2.89
CCM2-218	ENST00000541586	ST18	O60284	1047 aa		33.12	■■■□□ 2.89
CCM2-218	ENST00000541586	ZKSCAN1	P17029	563 aa	Predicted RBP	33.12	■■■□□ 2.89
CCM2-218	ENST00000541586	NEK4	P51957	841 aa		33.12	■■■□□ 2.89
CCM2-218	ENST00000541586	RNF20	Q5VTR2	975 aa		33.12	■■■□□ 2.89
CCM2-218	ENST00000541586	SPDYE2B	A6NHP3	402 aa		33.11	■■■□□ 2.89
CCM2-218	ENST00000541586	SPDYE6	P0CI01	402 aa		33.11	■■■□□ 2.89
CCM2-218	ENST00000541586	APOBEC3H	Q6NTF7	200 aa	Known RBP	33.11	■■■□□ 2.89
CCM2-218	ENST00000541586	FAM163A	Q96GL9	167 aa	Predicted RBP	33.11	■■■□□ 2.89
CCM2-218	ENST00000541586	AATF	Q9NY61	560 aa	Known RBP eCLIP	33.11	■■■□□ 2.89
CCM2-218	ENST00000541586	MYH2	Q9UKX2	1941 aa		33.11	■■■□□ 2.89
CCM2-218	ENST00000541586	IGSF3	O75054	1194 aa		33.11	■■■□□ 2.89
CCM2-218	ENST00000541586	BTD	P43251	543 aa		33.11	■■■□□ 2.89
CCM2-218	ENST00000541586	NOL10	Q9BSC4	688 aa	Known RBP	33.11	■■■□□ 2.89
CCM2-218	ENST00000541586	USP50	Q70EL3	339 aa	Predicted RBP	33.1	■■■□□ 2.89
CCM2-218	ENST00000541586	MTMR14	Q8NCE2	650 aa		33.1	■■■□□ 2.89
CCM2-218	ENST00000541586	UPF3B	Q9BZI7	483 aa	Known RBP	33.1	■■■□□ 2.89
CCM2-218	ENST00000541586	TDRD3	Q9H7E2	651 aa	Known RBP	33.1	■■■□□ 2.89
CCM2-218	ENST00000541586	GAK	O14976	1311 aa		33.09	■■■□□ 2.89
CCM2-218	ENST00000541586	SCN4A	P35499	1836 aa		33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	FOXP2	O15409	715 aa		33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	PNMA8A	Q86V59	439 aa	Predicted RBP	33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	CLEC11A	Q9Y240	323 aa		33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	ADAMTSL1	Q8N6G6	1762 aa		33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	GPR75-ASB3	A0A0A6YYF3	556 aa		33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	CLRN2	A0PK11	232 aa		33.08	■■■□□ 2.89
CCM2-218	ENST00000541586		K7ELQ4	463 aa	Predicted RBP	33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	MYO1B	O43795	1136 aa		33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	BAG3	O95817	575 aa		33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	DYNLL1	P63167	89 aa	Known RBP	33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	ADCK5	Q3MIX3	580 aa		33.08	■■■□□ 2.89
CCM2-218	ENST00000541586	ASTN2	O75129	1339 aa	Predicted RBP	33.07	■■■□□ 2.88
CCM2-218	ENST00000541586	ZNF784	Q8NCA9	323 aa	Predicted RBP	33.07	■■■□□ 2.88
CCM2-218	ENST00000541586	AIDA	Q96BJ3	306 aa		33.07	■■■□□ 2.88
CCM2-218	ENST00000541586	USP40	Q9NVE5	1235 aa		33.07	■■■□□ 2.88
CCM2-218	ENST00000541586	TAF6L	Q9Y6J9	622 aa		33.07	■■■□□ 2.88
CCM2-218	ENST00000541586	TSGA10IP	Q3SY00	556 aa		33.06	■■■□□ 2.88
CCM2-218	ENST00000541586	ZBED3	Q96IU2	234 aa	Predicted RBP	33.06	■■■□□ 2.88
CCM2-218	ENST00000541586	POTEI	P0CG38	1075 aa		33.05	■■■□□ 2.88
CCM2-218	ENST00000541586	POTEJ	P0CG39	1038 aa		33.05	■■■□□ 2.88
CCM2-218	ENST00000541586	JAKMIP1	Q96N16	626 aa	Known RBP	33.05	■■■□□ 2.88
CCM2-218	ENST00000541586	STRBP	Q96SI9	672 aa	Known RBP	33.05	■■■□□ 2.88
CCM2-218	ENST00000541586	TM6SF1	Q9BZW5	370 aa		33.05	■■■□□ 2.88
CCM2-218	ENST00000541586	SCAF8	Q9UPN6	1271 aa	Known RBP	33.05	■■■□□ 2.88

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