RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 MYL3P08590 195 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 GOLGA6DP0CG33 693 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 RLBP1P12271 317 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 MYCLP1P12525 358 aaPredicted RBP6.88□□□□□ -1.31
DDB1-219ENST00000541513 CASP2P42575 452 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 GUCY2FP51841 1108 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 KCTD2Q14681 263 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 MSS51Q4VC12 460 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 USPL1Q5W0Q7 1092 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 NECAB2Q7Z6G3 386 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 FAM169BQ8N8A8 192 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 ZSWIM2Q8NEG5 633 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 EPS8L3Q8TE67 593 aaKnown RBP6.88□□□□□ -1.31
DDB1-219ENST00000541513 WNT2BQ93097 391 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 ZNF775Q96BV0 537 aaPredicted RBP6.88□□□□□ -1.31
DDB1-219ENST00000541513 SLC10A4Q96EP9 437 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 NBPF3Q9H094 633 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 PTPRHQ9HD43 1115 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 GOLGA6AQ9NYA3 693 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 SCHIP1Q9P0W5 487 aaPredicted RBP6.88□□□□□ -1.31
DDB1-219ENST00000541513 SUPT16HQ9Y5B9 1047 aaKnown RBP6.88□□□□□ -1.31
DDB1-219ENST00000541513 DUOX2Q9NRD8 1548 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 A2MP01023 1474 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 PTPRKQ15262 1439 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 NCOA1Q15788 1441 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 ROCK1Q13464 1354 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 KDM2BQ8NHM5 1336 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 F2P00734 622 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 INHAP05111 366 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 GARTP22102 1010 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 IRS1P35568 1242 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 GIPRP48546 466 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 HIRAP54198 1017 aaPredicted RBP6.87□□□□□ -1.31
DDB1-219ENST00000541513 MAP3K10Q02779 954 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 SIM2Q14190 667 aaPredicted RBP6.87□□□□□ -1.31
DDB1-219ENST00000541513 LAPTM4AQ15012 233 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 FAM98CQ17RN3 349 aaKnown RBP6.87□□□□□ -1.31
DDB1-219ENST00000541513 GFOD2Q3B7J2 385 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 C11orf91Q3C1V1 193 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 ALFQ53S48 1182 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 TMEM67Q5HYA8 995 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 CT47A1Q5JQC4 288 aaPredicted RBP6.87□□□□□ -1.31
DDB1-219ENST00000541513 PERM1Q5SV97 790 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 FAM83BQ5T0W9 1011 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 CCDC70Q6NSX1 233 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 FBXL19Q6PCT2 694 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 SLITRK4Q8IW52 837 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 MAGEB6Q8N7X4 407 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 ST13P5Q8NFI4 369 aaPredicted RBP6.87□□□□□ -1.31
DDB1-219ENST00000541513 OR6P1Q8NGX9 317 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 SNRNP27Q8WVK2 155 aaKnown RBP6.87□□□□□ -1.31
DDB1-219ENST00000541513 GGNBP2Q9H3C7 697 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 RABGEF1Q9UJ41 708 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 MAPRE3Q9UPY8 281 aa6.87□□□□□ -1.31
DDB1-219ENST00000541513 DHX29Q7Z478 1369 aaKnown RBP6.86□□□□□ -1.31
DDB1-219ENST00000541513 ANKRD30AQ9BXX3 1397 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 GFRA3O60609 400 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 PDE8AO60658 829 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 RFPL1O75677 317 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 TRIM27P14373 513 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 GBP2P32456 591 aaPredicted RBP6.86□□□□□ -1.31
DDB1-219ENST00000541513 WNT7BP56706 349 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 MLC1Q15049 377 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 MTFR1Q15390 333 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 FXNQ16595 210 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 LONRF2Q1L5Z9 754 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 WWC2Q6AWC2 1192 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 SLC9A9Q8IVB4 645 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 STK11IPQ8N1F8 1099 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 RIN3Q8TB24 985 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 NUDT16Q96DE0 195 aaKnown RBP6.86□□□□□ -1.31
DDB1-219ENST00000541513 PRR14Q9BWN1 585 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 CARD14Q9BXL6 1004 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 PPCSQ9HAB8 311 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 AS3MTQ9HBK9 375 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 ST7Q9NRC1 585 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 ADAMTSL3P82987 1691 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 GCC2Q8IWJ2 1684 aa6.86□□□□□ -1.31
DDB1-219ENST00000541513 RNF17Q9BXT8 1623 aaKnown RBP6.86□□□□□ -1.31
DDB1-219ENST00000541513 KIF15Q9NS87 1388 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 GSG1L2A8MUP6 293 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 MINDY4BA8MYZ0 360 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 DIAPH1O60610 1272 aaKnown RBP6.85□□□□□ -1.31
DDB1-219ENST00000541513 TCEA3O75764 348 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 TRIM37O94972 964 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 IFIT2P09913 472 aaKnown RBP6.85□□□□□ -1.31
DDB1-219ENST00000541513 VDRP11473 427 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 GSTT1P30711 240 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 SCTRP47872 440 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 DGKGP49619 791 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 MMP16P51512 607 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 ERVK-9P63128 1117 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 SLC4A10Q6U841 1118 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 NXPE4Q6UWF7 544 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 SAMD7Q7Z3H4 446 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 HDGFL2Q7Z4V5 671 aaPredicted RBP6.85□□□□□ -1.31
DDB1-219ENST00000541513 SMAP1Q8IYB5 467 aaPredicted RBP6.85□□□□□ -1.31
DDB1-219ENST00000541513 ENOX1Q8TC92 643 aaKnown RBP6.85□□□□□ -1.31
DDB1-219ENST00000541513 NEUROD6Q96NK8 337 aa6.85□□□□□ -1.31
DDB1-219ENST00000541513 C1QTNF2Q9BXJ5 285 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms