RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.75■■□□□ 1.55
ATN1-204ENST00000541029 ZGPATQ8N5A5 531 aaKnown RBP24.75■■□□□ 1.55
ATN1-204ENST00000541029 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.75■■□□□ 1.55
ATN1-204ENST00000541029 PANK1Q8TE04 598 aa24.75■■□□□ 1.55
ATN1-204ENST00000541029 SSH3Q8TE77 659 aa24.75■■□□□ 1.55
ATN1-204ENST00000541029 ZBTB7BO15156 539 aaPredicted RBP24.74■■□□□ 1.55
ATN1-204ENST00000541029 ATP8B2P98198 1209 aa24.74■■□□□ 1.55
ATN1-204ENST00000541029 NFIAQ12857 509 aa24.74■■□□□ 1.55
ATN1-204ENST00000541029 DZIP1Q86YF9 867 aaKnown RBP24.74■■□□□ 1.55
ATN1-204ENST00000541029 OPTNQ96CV9 577 aa24.74■■□□□ 1.55
ATN1-204ENST00000541029 ABCF2Q9UG63 623 aa24.74■■□□□ 1.55
ATN1-204ENST00000541029 GAKO14976 1311 aa24.73■■□□□ 1.55
ATN1-204ENST00000541029 GORABQ5T7V8 394 aa24.73■■□□□ 1.55
ATN1-204ENST00000541029 PI16Q6UXB8 463 aa24.73■■□□□ 1.55
ATN1-204ENST00000541029 IFNL1Q8IU54 200 aa24.73■■□□□ 1.55
ATN1-204ENST00000541029 CNKSR2Q8WXI2 1034 aa24.73■■□□□ 1.55
ATN1-204ENST00000541029 CCDC85CA6NKD9 419 aa24.72■■□□□ 1.55
ATN1-204ENST00000541029 IGF2BP3O00425 579 aaKnown RBP eCLIP24.72■■□□□ 1.55
ATN1-204ENST00000541029 TCP10Q12799 353 aa24.72■■□□□ 1.55
ATN1-204ENST00000541029 OS9Q13438 667 aaPredicted RBP24.72■■□□□ 1.55
ATN1-204ENST00000541029 ZNF296Q8WUU4 475 aaPredicted RBP24.72■■□□□ 1.55
ATN1-204ENST00000541029 R3HDMLQ9H3Y0 253 aa24.72■■□□□ 1.55
ATN1-204ENST00000541029 HMG20BQ9P0W2 317 aa24.72■■□□□ 1.55
ATN1-204ENST00000541029 RFX7Q2KHR2 1363 aa24.71■■□□□ 1.55
ATN1-204ENST00000541029 MAP3K9P80192 1104 aa24.71■■□□□ 1.55
ATN1-204ENST00000541029 FAM151AQ8WW52 585 aa24.71■■□□□ 1.55
ATN1-204ENST00000541029 WRNIP1Q96S55 665 aa24.71■■□□□ 1.55
ATN1-204ENST00000541029 CFHR5Q9BXR6 569 aa24.71■■□□□ 1.55
ATN1-204ENST00000541029 USP40Q9NVE5 1235 aa24.71■■□□□ 1.55
ATN1-204ENST00000541029 CSADQ9Y600 493 aa24.71■■□□□ 1.55
ATN1-204ENST00000541029 CDK5RAP2Q96SN8 1893 aa24.7■■□□□ 1.55
ATN1-204ENST00000541029 GPR25O00155 361 aa24.7■■□□□ 1.54
ATN1-204ENST00000541029 SURF6O75683 361 aaKnown RBP24.7■■□□□ 1.54
ATN1-204ENST00000541029 ARID4AP29374 1257 aaPredicted RBP24.7■■□□□ 1.54
ATN1-204ENST00000541029 CTU1Q7Z7A3 348 aaKnown RBP24.7■■□□□ 1.54
ATN1-204ENST00000541029 SPATA5Q8NB90 893 aa24.7■■□□□ 1.54
ATN1-204ENST00000541029 HOOK2Q96ED9 719 aa24.7■■□□□ 1.54
ATN1-204ENST00000541029 FAM198AQ9UFP1 575 aa24.7■■□□□ 1.54
ATN1-204ENST00000541029 SNCAIPQ9Y6H5 919 aa24.7■■□□□ 1.54
ATN1-204ENST00000541029 ALDH1A1P00352 501 aa24.69■■□□□ 1.54
ATN1-204ENST00000541029 INHBEP58166 350 aa24.69■■□□□ 1.54
ATN1-204ENST00000541029 TNNI3KQ59H18 835 aa24.69■■□□□ 1.54
ATN1-204ENST00000541029 DCAF15Q66K64 600 aa24.69■■□□□ 1.54
ATN1-204ENST00000541029 SPTY2D1Q68D10 685 aaPredicted RBP24.69■■□□□ 1.54
ATN1-204ENST00000541029 FPGT-TNNI3KV9GXZ4 949 aa24.69■■□□□ 1.54
ATN1-204ENST00000541029 MROH7-TTC4A0A0A0MT08 1334 aa24.68■■□□□ 1.54
ATN1-204ENST00000541029 MCAMP43121 646 aa24.68■■□□□ 1.54
ATN1-204ENST00000541029 MECOMQ03112 1051 aa24.68■■□□□ 1.54
ATN1-204ENST00000541029 NOM1Q5C9Z4 860 aaKnown RBP24.68■■□□□ 1.54
ATN1-204ENST00000541029 CEP85Q6P2H3 762 aa24.68■■□□□ 1.54
ATN1-204ENST00000541029 ERICH6Q7L0X2 663 aa24.68■■□□□ 1.54
ATN1-204ENST00000541029 MIGA2Q7L4E1 593 aa24.68■■□□□ 1.54
ATN1-204ENST00000541029 ZKSCAN4Q969J2 545 aaPredicted RBP24.68■■□□□ 1.54
ATN1-204ENST00000541029 OTUD5Q96G74 571 aa24.68■■□□□ 1.54
ATN1-204ENST00000541029 BTDP43251 543 aa24.67■■□□□ 1.54
ATN1-204ENST00000541029 TBC1D9Q6ZT07 1266 aa24.67■■□□□ 1.54
ATN1-204ENST00000541029 ZNF384Q8TF68 577 aa24.67■■□□□ 1.54
ATN1-204ENST00000541029 DBNDD2Q9BQY9 259 aa24.67■■□□□ 1.54
ATN1-204ENST00000541029 ZNF341Q9BYN7 854 aa24.67■■□□□ 1.54
ATN1-204ENST00000541029 GPR108Q9NPR9 543 aa24.67■■□□□ 1.54
ATN1-204ENST00000541029 DOCK1Q14185 1865 aa24.66■■□□□ 1.54
ATN1-204ENST00000541029 FOCADQ5VW36 1801 aa24.66■■□□□ 1.54
ATN1-204ENST00000541029 TESPA1A2RU30 521 aaPredicted RBP24.66■■□□□ 1.54
ATN1-204ENST00000541029 SPDYE5A6NIY4 337 aa24.66■■□□□ 1.54
ATN1-204ENST00000541029 RGS3P49796 1198 aa24.66■■□□□ 1.54
ATN1-204ENST00000541029 ZFPM1Q8IX07 1006 aa24.66■■□□□ 1.54
ATN1-204ENST00000541029 SLF2Q8IX21 1173 aa24.66■■□□□ 1.54
ATN1-204ENST00000541029 MS4A4AQ96JQ5 239 aa24.66■■□□□ 1.54
ATN1-204ENST00000541029 PTPN18Q99952 460 aa24.66■■□□□ 1.54
ATN1-204ENST00000541029 NOP58Q9Y2X3 529 aaKnown RBP24.66■■□□□ 1.54
ATN1-204ENST00000541029 UQCRFS1P1P0C7P4 283 aa24.65■■□□□ 1.54
ATN1-204ENST00000541029 ATRNL1Q5VV63 1379 aa24.65■■□□□ 1.54
ATN1-204ENST00000541029 FKTNO75072 461 aa24.64■■□□□ 1.54
ATN1-204ENST00000541029 TTC39AQ5SRH9 613 aa24.64■■□□□ 1.54
ATN1-204ENST00000541029 BRI3BPQ8WY22 251 aa24.64■■□□□ 1.54
ATN1-204ENST00000541029 FAM163AQ96GL9 167 aaPredicted RBP24.64■■□□□ 1.54
ATN1-204ENST00000541029 IDI2Q9BXS1 227 aa24.64■■□□□ 1.54
ATN1-204ENST00000541029 ATAD5Q96QE3 1844 aa24.63■■□□□ 1.53
ATN1-204ENST00000541029 CCL15-CCL14A0A0B4J2E2 113 aa24.63■■□□□ 1.53
ATN1-204ENST00000541029 INPP5BP32019 993 aa24.63■■□□□ 1.53
ATN1-204ENST00000541029 GTF2A2P52657 109 aa24.63■■□□□ 1.53
ATN1-204ENST00000541029 CRHR2Q13324 411 aa24.63■■□□□ 1.53
ATN1-204ENST00000541029 CCL15Q16663 113 aa24.63■■□□□ 1.53
ATN1-204ENST00000541029 OTUD7BQ6GQQ9 843 aa24.63■■□□□ 1.53
ATN1-204ENST00000541029 NSUN4Q96CB9 384 aaKnown RBP24.63■■□□□ 1.53
ATN1-204ENST00000541029 DDX4Q9NQI0 724 aaKnown RBP24.63■■□□□ 1.53
ATN1-204ENST00000541029 SNRKQ9NRH2 765 aa24.63■■□□□ 1.53
ATN1-204ENST00000541029 TLR7Q9NYK1 1049 aaKnown RBP24.63■■□□□ 1.53
ATN1-204ENST00000541029 RAI14Q9P0K7 980 aa24.63■■□□□ 1.53
ATN1-204ENST00000541029 PTPRFP10586 1907 aa24.63■■□□□ 1.53
ATN1-204ENST00000541029 ENTPD3O75355 529 aa24.62■■□□□ 1.53
ATN1-204ENST00000541029 WDHD1O75717 1129 aaPredicted RBP24.62■■□□□ 1.53
ATN1-204ENST00000541029 MS4A1P11836 297 aa24.62■■□□□ 1.53
ATN1-204ENST00000541029 PICALMQ13492 652 aa24.62■■□□□ 1.53
ATN1-204ENST00000541029 ERO1BQ86YB8 467 aa24.62■■□□□ 1.53
ATN1-204ENST00000541029 DBNLQ9UJU6 430 aaKnown RBP24.62■■□□□ 1.53
ATN1-204ENST00000541029 RCAN3Q9UKA8 241 aa24.62■■□□□ 1.53
ATN1-204ENST00000541029 PHIPQ8WWQ0 1821 aa24.62■■□□□ 1.53
ATN1-204ENST00000541029 HTTP42858 3142 aa24.62■■□□□ 1.53
ATN1-204ENST00000541029 GPR75-ASB3A0A0A6YYF3 556 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms