RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ARHGAP39Q9C0H5 1083 aa33.64■■■□□ 2.98
CHFR-218ENST00000540963 ANP32CO43423 234 aa33.63■■■□□ 2.97
CHFR-218ENST00000540963 C17orf99Q6UX52 265 aa33.63■■■□□ 2.97
CHFR-218ENST00000540963 WDR66Q8TBY9 1149 aa33.63■■■□□ 2.97
CHFR-218ENST00000540963 PTPRCP08575 1304 aa33.62■■■□□ 2.97
CHFR-218ENST00000540963 ANKRD23Q86SG2 305 aa33.62■■■□□ 2.97
CHFR-218ENST00000540963 SH3TC2Q8TF17 1288 aa33.62■■■□□ 2.97
CHFR-218ENST00000540963 FAM151AQ8WW52 585 aa33.62■■■□□ 2.97
CHFR-218ENST00000540963 ZNF316A6NFI3 1004 aaPredicted RBP33.61■■■□□ 2.97
CHFR-218ENST00000540963 ZNF112Q9UJU3 913 aa33.61■■■□□ 2.97
CHFR-218ENST00000540963 KCNH4Q9UQ05 1017 aa33.6■■■□□ 2.97
CHFR-218ENST00000540963 HOXD10P28358 340 aa33.59■■■□□ 2.97
CHFR-218ENST00000540963 COLQQ9Y215 455 aaPredicted RBP33.59■■■□□ 2.97
CHFR-218ENST00000540963 AK9Q5TCS8 1911 aa33.59■■■□□ 2.97
CHFR-218ENST00000540963 CEP290O15078 2479 aa33.58■■■□□ 2.97
CHFR-218ENST00000540963 MRPL50Q8N5N7 158 aaKnown RBP33.58■■■□□ 2.97
CHFR-218ENST00000540963 SLC5A1P13866 664 aa33.57■■■□□ 2.96
CHFR-218ENST00000540963 INPP5BP32019 993 aa33.57■■■□□ 2.96
CHFR-218ENST00000540963 MIGA2Q7L4E1 593 aa33.57■■■□□ 2.96
CHFR-218ENST00000540963 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.57■■■□□ 2.96
CHFR-218ENST00000540963 KLHDC4Q8TBB5 520 aa33.57■■■□□ 2.96
CHFR-218ENST00000540963 LPIN2Q92539 896 aa33.57■■■□□ 2.96
CHFR-218ENST00000540963 SRRDQ9UH36 339 aa33.57■■■□□ 2.96
CHFR-218ENST00000540963 NOL9Q5SY16 702 aaKnown RBP33.56■■■□□ 2.96
CHFR-218ENST00000540963 NKX2-3Q8TAU0 364 aa33.56■■■□□ 2.96
CHFR-218ENST00000540963 USP44Q9H0E7 712 aa33.56■■■□□ 2.96
CHFR-218ENST00000540963 ADGRA2Q96PE1 1338 aa33.55■■■□□ 2.96
CHFR-218ENST00000540963 EYA2O00167 538 aa33.55■■■□□ 2.96
CHFR-218ENST00000540963 PDHXO00330 501 aa33.55■■■□□ 2.96
CHFR-218ENST00000540963 PSMC4P43686 418 aa33.55■■■□□ 2.96
CHFR-218ENST00000540963 ZNF521Q96K83 1311 aa33.54■■■□□ 2.96
CHFR-218ENST00000540963 MYCP01106 439 aaPredicted RBP33.54■■■□□ 2.96
CHFR-218ENST00000540963 TRIM47Q96LD4 638 aa33.54■■■□□ 2.96
CHFR-218ENST00000540963 CPA4Q9UI42 421 aa33.54■■■□□ 2.96
CHFR-218ENST00000540963 DAGLAQ9Y4D2 1042 aa33.53■■■□□ 2.96
CHFR-218ENST00000540963 H0YGN5 161 aa33.52■■■□□ 2.96
CHFR-218ENST00000540963 CTGFP29279 349 aa33.52■■■□□ 2.96
CHFR-218ENST00000540963 CDC42EP5Q6NZY7 148 aa33.52■■■□□ 2.96
CHFR-218ENST00000540963 FBXO3Q9UK99 471 aa33.52■■■□□ 2.96
CHFR-218ENST00000540963 OSBPP22059 807 aa33.51■■■□□ 2.95
CHFR-218ENST00000540963 GRK4P32298 578 aa33.51■■■□□ 2.95
CHFR-218ENST00000540963 RFX5P48382 616 aaPredicted RBP33.51■■■□□ 2.95
CHFR-218ENST00000540963 MOGSQ13724 837 aa33.51■■■□□ 2.95
CHFR-218ENST00000540963 RAET1EQ8TD07 263 aa33.51■■■□□ 2.95
CHFR-218ENST00000540963 CXCL11O14625 94 aa33.5■■■□□ 2.95
CHFR-218ENST00000540963 SHISA4Q96DD7 197 aa33.5■■■□□ 2.95
CHFR-218ENST00000540963 PARK7Q99497 189 aaKnown RBP33.5■■■□□ 2.95
CHFR-218ENST00000540963 ZBTB22O15209 634 aa33.49■■■□□ 2.95
CHFR-218ENST00000540963 MGAMO43451 1857 aa33.49■■■□□ 2.95
CHFR-218ENST00000540963 FMNL1O95466 1100 aaPredicted RBP33.49■■■□□ 2.95
CHFR-218ENST00000540963 TCP10Q12799 353 aa33.49■■■□□ 2.95
CHFR-218ENST00000540963 GNL3LQ9NVN8 582 aaKnown RBP33.49■■■□□ 2.95
CHFR-218ENST00000540963 SALL1Q9NSC2 1324 aa33.49■■■□□ 2.95
CHFR-218ENST00000540963 TRIOBPQ9H2D6 2365 aa33.48■■■□□ 2.95
CHFR-218ENST00000540963 GJB1P08034 283 aa33.48■■■□□ 2.95
CHFR-218ENST00000540963 MTFR1Q15390 333 aa33.48■■■□□ 2.95
CHFR-218ENST00000540963 FAM9BQ8IZU0 186 aa33.48■■■□□ 2.95
CHFR-218ENST00000540963 MYPNQ86TC9 1320 aa33.48■■■□□ 2.95
CHFR-218ENST00000540963 LDHBP07195 334 aaKnown RBP33.47■■■□□ 2.95
CHFR-218ENST00000540963 GJA8P48165 433 aa33.47■■■□□ 2.95
CHFR-218ENST00000540963 NFIAQ12857 509 aa33.47■■■□□ 2.95
CHFR-218ENST00000540963 ATG9AQ7Z3C6 839 aa33.47■■■□□ 2.95
CHFR-218ENST00000540963 FAM198AQ9UFP1 575 aa33.47■■■□□ 2.95
CHFR-218ENST00000540963 SEMA3EO15041 775 aa33.46■■■□□ 2.95
CHFR-218ENST00000540963 BCRP11274 1271 aa33.46■■■□□ 2.95
CHFR-218ENST00000540963 PRDX5P30044 214 aa33.46■■■□□ 2.95
CHFR-218ENST00000540963 DIXDC1Q155Q3 683 aa33.46■■■□□ 2.95
CHFR-218ENST00000540963 DOCK2Q92608 1830 aa33.45■■■□□ 2.95
CHFR-218ENST00000540963 CIAO1O76071 339 aa33.45■■■□□ 2.95
CHFR-218ENST00000540963 FCGRTP55899 365 aa33.44■■■□□ 2.94
CHFR-218ENST00000540963 UBXN2AP68543 259 aa33.44■■■□□ 2.94
CHFR-218ENST00000540963 UBE2Q1Q7Z7E8 422 aa33.44■■■□□ 2.94
CHFR-218ENST00000540963 SSH1Q8WYL5 1049 aa33.44■■■□□ 2.94
CHFR-218ENST00000540963 HTATIP2Q9BUP3 242 aa33.44■■■□□ 2.94
CHFR-218ENST00000540963 USP40Q9NVE5 1235 aa33.44■■■□□ 2.94
CHFR-218ENST00000540963 CAPN2P17655 700 aa33.43■■■□□ 2.94
CHFR-218ENST00000540963 GPAT2Q6NUI2 795 aa33.43■■■□□ 2.94
CHFR-218ENST00000540963 FASTKD5Q7L8L6 764 aaKnown RBP33.43■■■□□ 2.94
CHFR-218ENST00000540963 DPF3Q92784 378 aa33.43■■■□□ 2.94
CHFR-218ENST00000540963 DENND2AQ9ULE3 1009 aa33.43■■■□□ 2.94
CHFR-218ENST00000540963 ATRNL1Q5VV63 1379 aa33.43■■■□□ 2.94
CHFR-218ENST00000540963 MYH2Q9UKX2 1941 aa33.43■■■□□ 2.94
CHFR-218ENST00000540963 ENTPD3O75355 529 aa33.42■■■□□ 2.94
CHFR-218ENST00000540963 CCL5P13501 91 aa33.42■■■□□ 2.94
CHFR-218ENST00000540963 ATP2B3Q16720 1220 aa33.42■■■□□ 2.94
CHFR-218ENST00000540963 SLAIN1Q8ND83 568 aa33.42■■■□□ 2.94
CHFR-218ENST00000540963 IDI2Q9BXS1 227 aa33.42■■■□□ 2.94
CHFR-218ENST00000540963 CEP126Q9P2H0 1117 aa33.42■■■□□ 2.94
CHFR-218ENST00000540963 SLC45A1Q9Y2W3 748 aa33.42■■■□□ 2.94
CHFR-218ENST00000540963 E9PSI1 815 aa33.41■■■□□ 2.94
CHFR-218ENST00000540963 ZGPATQ8N5A5 531 aaKnown RBP33.41■■■□□ 2.94
CHFR-218ENST00000540963 A0A0G2JLL6 359 aaPredicted RBP33.4■■■□□ 2.94
CHFR-218ENST00000540963 PHF20L1A8MW92 1017 aa33.4■■■□□ 2.94
CHFR-218ENST00000540963 ECM2O94769 699 aaPredicted RBP33.4■■■□□ 2.94
CHFR-218ENST00000540963 ALDH1L2Q3SY69 923 aa33.4■■■□□ 2.94
CHFR-218ENST00000540963 PRRT2Q7Z6L0 340 aaPredicted RBP33.4■■■□□ 2.94
CHFR-218ENST00000540963 SCYL3Q8IZE3 742 aa33.4■■■□□ 2.94
CHFR-218ENST00000540963 RNF208Q9H0X6 261 aa33.4■■■□□ 2.94
CHFR-218ENST00000540963 MAP3K10Q02779 954 aa33.39■■■□□ 2.94
CHFR-218ENST00000540963 PRKCZQ05513 592 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms