RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 TNNI2P48788 182 aa20.69■□□□□ 0.9
CD9-209ENST00000540891 TTLL12Q14166 644 aaPredicted RBP20.69■□□□□ 0.9
CD9-209ENST00000540891 MYH2Q9UKX2 1941 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 SLC10A3P09131 477 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 MAP2K2P36507 400 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 ZNF157P51786 506 aaPredicted RBP20.68■□□□□ 0.9
CD9-209ENST00000540891 NFIAQ12857 509 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 MAP3K11Q16584 847 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 SUPT20HL1Q3ZLR7 823 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 LDLRAD1Q5T700 205 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 FAM83AQ86UY5 434 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 PIH1D3Q9NQM4 214 aaKnown RBP20.68■□□□□ 0.9
CD9-209ENST00000540891 USP40Q9NVE5 1235 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 WBP1LQ9NX94 342 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 TMOD2Q9NZR1 351 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 ANGEL1Q9UNK9 670 aaKnown RBP20.68■□□□□ 0.9
CD9-209ENST00000540891 NDUFB9Q9Y6M9 179 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
CD9-209ENST00000540891 BTDP43251 543 aa20.67■□□□□ 0.9
CD9-209ENST00000540891 ARMC9Q7Z3E5 817 aa20.67■□□□□ 0.9
CD9-209ENST00000540891 RASAL3Q86YV0 1011 aa20.67■□□□□ 0.9
CD9-209ENST00000540891 RAI14Q9P0K7 980 aa20.67■□□□□ 0.9
CD9-209ENST00000540891 LRP2BPQ9P2M1 347 aa20.67■□□□□ 0.9
CD9-209ENST00000540891 RFX7Q2KHR2 1363 aa20.67■□□□□ 0.9
CD9-209ENST00000540891 GPR75-ASB3A0A0A6YYF3 556 aa20.66■□□□□ 0.9
CD9-209ENST00000540891 SMARCA5O60264 1052 aaPredicted RBP20.66■□□□□ 0.9
CD9-209ENST00000540891 USP2O75604 605 aaPredicted RBP20.66■□□□□ 0.9
CD9-209ENST00000540891 NOGQ13253 232 aa20.66■□□□□ 0.9
CD9-209ENST00000540891 SLF2Q8IX21 1173 aa20.66■□□□□ 0.9
CD9-209ENST00000540891 CCDC102AQ96A19 550 aa20.66■□□□□ 0.9
CD9-209ENST00000540891 LRRCC1Q9C099 1032 aa20.66■□□□□ 0.9
CD9-209ENST00000540891 FAM198AQ9UFP1 575 aa20.66■□□□□ 0.9
CD9-209ENST00000540891 RPAP1Q9BWH6 1393 aaPredicted RBP20.65■□□□□ 0.9
CD9-209ENST00000540891 IFIT2P09913 472 aaKnown RBP20.65■□□□□ 0.9
CD9-209ENST00000540891 RHBDL3P58872 404 aa20.65■□□□□ 0.9
CD9-209ENST00000540891 BCL11AQ9H165 835 aa20.65■□□□□ 0.9
CD9-209ENST00000540891 ANTXR1Q9H6X2 564 aa20.65■□□□□ 0.9
CD9-209ENST00000540891 SUPT16HQ9Y5B9 1047 aaKnown RBP20.65■□□□□ 0.9
CD9-209ENST00000540891 MAST2Q6P0Q8 1798 aa20.64■□□□□ 0.9
CD9-209ENST00000540891 PPP1R12BO60237 982 aaPredicted RBP20.64■□□□□ 0.89
CD9-209ENST00000540891 GSTO1P78417 241 aa20.64■□□□□ 0.89
CD9-209ENST00000540891 MAP2K1Q02750 393 aaPredicted RBP20.64■□□□□ 0.89
CD9-209ENST00000540891 ZFPM1Q8IX07 1006 aa20.64■□□□□ 0.89
CD9-209ENST00000540891 FAM151AQ8WW52 585 aa20.64■□□□□ 0.89
CD9-209ENST00000540891 IDI2Q9BXS1 227 aa20.64■□□□□ 0.89
CD9-209ENST00000540891 MYO5AQ9Y4I1 1855 aaKnown RBP20.64■□□□□ 0.89
CD9-209ENST00000540891 FOXN1O15353 648 aa20.63■□□□□ 0.89
CD9-209ENST00000540891 WDHD1O75717 1129 aaPredicted RBP20.63■□□□□ 0.89
CD9-209ENST00000540891 LDHCP07864 332 aa20.63■□□□□ 0.89
CD9-209ENST00000540891 TCP10Q12799 353 aa20.63■□□□□ 0.89
CD9-209ENST00000540891 ADGRA1Q86SQ6 560 aa20.63■□□□□ 0.89
CD9-209ENST00000540891 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.63■□□□□ 0.89
CD9-209ENST00000540891 KIF23Q02241 960 aaPredicted RBP20.62■□□□□ 0.89
CD9-209ENST00000540891 NAA16Q6N069 864 aaPredicted RBP20.62■□□□□ 0.89
CD9-209ENST00000540891 CLMNQ96JQ2 1002 aa20.62■□□□□ 0.89
CD9-209ENST00000540891 DDX4Q9NQI0 724 aaKnown RBP20.62■□□□□ 0.89
CD9-209ENST00000540891 IGSF3O75054 1194 aa20.61■□□□□ 0.89
CD9-209ENST00000540891 RGS3P49796 1198 aa20.61■□□□□ 0.89
CD9-209ENST00000540891 DOCK2Q92608 1830 aa20.6■□□□□ 0.89
CD9-209ENST00000540891 OTOFQ9HC10 1997 aa20.6■□□□□ 0.89
CD9-209ENST00000540891 ENTPD3O75355 529 aa20.6■□□□□ 0.89
CD9-209ENST00000540891 IREB2P48200 963 aaKnown RBP20.6■□□□□ 0.89
CD9-209ENST00000540891 EXOC6Q8TAG9 804 aa20.6■□□□□ 0.89
CD9-209ENST00000540891 UNCXA6NJT0 531 aa20.59■□□□□ 0.89
CD9-209ENST00000540891 IDH1O75874 414 aaKnown RBP20.59■□□□□ 0.89
CD9-209ENST00000540891 ATP5JP18859 108 aa20.59■□□□□ 0.89
CD9-209ENST00000540891 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.59■□□□□ 0.89
CD9-209ENST00000540891 SH3BP5LQ7L8J4 393 aa20.59■□□□□ 0.89
CD9-209ENST00000540891 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.59■□□□□ 0.89
CD9-209ENST00000540891 ATRNL1Q5VV63 1379 aa20.59■□□□□ 0.89
CD9-209ENST00000540891 PPP4CP60510 307 aa20.58■□□□□ 0.89
CD9-209ENST00000540891 HDAC1Q13547 482 aaPredicted RBP20.58■□□□□ 0.89
CD9-209ENST00000540891 AAMPQ13685 434 aa20.58■□□□□ 0.89
CD9-209ENST00000540891 ANKRD13AQ8IZ07 590 aa20.58■□□□□ 0.89
CD9-209ENST00000540891 AIDAQ96BJ3 306 aa20.58■□□□□ 0.89
CD9-209ENST00000540891 EDC3Q96F86 508 aaKnown RBP20.58■□□□□ 0.89
CD9-209ENST00000540891 CSRNP1Q96S65 589 aa20.58■□□□□ 0.89
CD9-209ENST00000540891 BOLA2Q9H3K6 86 aa20.58■□□□□ 0.89
CD9-209ENST00000540891 AATFQ9NY61 560 aaKnown RBP eCLIP20.58■□□□□ 0.89
CD9-209ENST00000540891 GOLIM4O00461 696 aa20.57■□□□□ 0.88
CD9-209ENST00000540891 NPM3O75607 178 aaKnown RBP20.57■□□□□ 0.88
CD9-209ENST00000540891 MAP4K4O95819 1239 aaPredicted RBP20.57■□□□□ 0.88
CD9-209ENST00000540891 MKRN3Q13064 507 aaKnown RBP20.57■□□□□ 0.88
CD9-209ENST00000540891 PICALMQ13492 652 aa20.57■□□□□ 0.88
CD9-209ENST00000540891 SPRYD7Q5W111 196 aa20.57■□□□□ 0.88
CD9-209ENST00000540891 MIGA2Q7L4E1 593 aa20.57■□□□□ 0.88
CD9-209ENST00000540891 MAGEB6Q8N7X4 407 aa20.57■□□□□ 0.88
CD9-209ENST00000540891 SH3RF3Q8TEJ3 882 aaPredicted RBP20.57■□□□□ 0.88
CD9-209ENST00000540891 SLC10A4Q96EP9 437 aa20.57■□□□□ 0.88
CD9-209ENST00000540891 DNAJC2Q99543 621 aaKnown RBP20.57■□□□□ 0.88
CD9-209ENST00000540891 DDTLA6NHG4 134 aaPredicted RBP20.56■□□□□ 0.88
CD9-209ENST00000540891 HSPA8P11142 646 aaKnown RBP20.56■□□□□ 0.88
CD9-209ENST00000540891 CYP7A1P22680 504 aa20.56■□□□□ 0.88
CD9-209ENST00000540891 GJA5P36382 358 aa20.56■□□□□ 0.88
CD9-209ENST00000540891 MAP3K9P80192 1104 aa20.56■□□□□ 0.88
CD9-209ENST00000540891 MAP3K12Q12852 859 aa20.56■□□□□ 0.88
CD9-209ENST00000540891 TTF1Q15361 905 aaPredicted RBP20.56■□□□□ 0.88
CD9-209ENST00000540891 WNK4Q96J92 1243 aa20.56■□□□□ 0.88
CD9-209ENST00000540891 HAUS7Q99871 368 aa20.56■□□□□ 0.88
CD9-209ENST00000540891 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms