RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 GRIK3Q13003 919 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 FAM98CQ17RN3 349 aaKnown RBP11.13□□□□□ -0.63
CLDN2-202ENST00000540876 CCDC26Q8TAB7 109 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 SMARCC1Q92922 1105 aaPredicted RBP11.13□□□□□ -0.63
CLDN2-202ENST00000540876 FMNL2Q96PY5 1086 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 COL18A1P39060 1754 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 HSPA4P34932 840 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 CHMP4BP1P59074 171 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 FAM182BQ5T319 152 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 CEP85Q6P2H3 762 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 MPRIPQ6WCQ1 1025 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 CEP57L1Q8IYX8 460 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 HNRNPLLQ8WVV9 542 aaKnown RBP11.13□□□□□ -0.63
CLDN2-202ENST00000540876 ERCC4Q92889 916 aaPredicted RBP11.13□□□□□ -0.63
CLDN2-202ENST00000540876 PGBD1Q96JS3 809 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 FAM210AQ96ND0 272 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 PNKPQ96T60 521 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 API5Q9BZZ5 524 aaKnown RBP11.13□□□□□ -0.63
CLDN2-202ENST00000540876 RPS6KL1Q9Y6S9 549 aa11.13□□□□□ -0.63
CLDN2-202ENST00000540876 RHOXF2BP0C7M4 288 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 UNC5CLQ8IV45 518 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 TTC14Q96N46 770 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 BAG1Q99933 345 aaPredicted RBP11.12□□□□□ -0.63
CLDN2-202ENST00000540876 PAIP2Q9BPZ3 127 aaKnown RBP11.12□□□□□ -0.63
CLDN2-202ENST00000540876 RHOXF2Q9BQY4 288 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 WDHD1O75717 1129 aaPredicted RBP11.12□□□□□ -0.63
CLDN2-202ENST00000540876 RPAP2Q8IXW5 612 aaPredicted RBP11.12□□□□□ -0.63
CLDN2-202ENST00000540876 ANKZF1Q9H8Y5 726 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 ANO10Q9NW15 660 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 SAMM50Q9Y512 469 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 SNX14Q9Y5W7 946 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
CLDN2-202ENST00000540876 KDRP35968 1356 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 ZSCAN12O43309 604 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 MEGF6O75095 1541 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 SNX1Q13596 522 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 ZNF530Q6P9A1 599 aaPredicted RBP11.12□□□□□ -0.63
CLDN2-202ENST00000540876 PARD3BQ8TEW8 1205 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 IL25Q9H293 177 aa11.12□□□□□ -0.63
CLDN2-202ENST00000540876 BCL9LQ86UU0 1499 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 SHTN1A0MZ66 631 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 VWA3AA6NCI4 1184 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 RTN2O75298 545 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 RWDD2BP57060 319 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 CEBPZQ03701 1054 aaKnown RBP11.11□□□□□ -0.63
CLDN2-202ENST00000540876 GOLGA8FQ08AF8 430 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 GOLGA8DPQ0D2H9 430 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 ILDR1Q86SU0 546 aaPredicted RBP11.11□□□□□ -0.63
CLDN2-202ENST00000540876 BCAS4Q8TDM0 211 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 ZBTB10Q96DT7 871 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 NAT10Q9H0A0 1025 aaKnown RBP11.11□□□□□ -0.63
CLDN2-202ENST00000540876 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.11□□□□□ -0.63
CLDN2-202ENST00000540876 COL22A1Q8NFW1 1626 aaPredicted RBP11.11□□□□□ -0.63
CLDN2-202ENST00000540876 KIAA0754O94854 1291 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 TATP17735 454 aaPredicted RBP11.11□□□□□ -0.63
CLDN2-202ENST00000540876 RBBP5Q15291 538 aaKnown RBP11.11□□□□□ -0.63
CLDN2-202ENST00000540876 RASEFQ8IZ41 740 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 FNBP4Q8N3X1 1017 aaPredicted RBP11.11□□□□□ -0.63
CLDN2-202ENST00000540876 CCDC12Q8WUD4 166 aaPredicted RBP11.11□□□□□ -0.63
CLDN2-202ENST00000540876 EHD4Q9H223 541 aa11.11□□□□□ -0.63
CLDN2-202ENST00000540876 LRRIQ3A6PVS8 624 aaPredicted RBP11.1□□□□□ -0.63
CLDN2-202ENST00000540876 MRPL12P52815 198 aaKnown RBP11.1□□□□□ -0.63
CLDN2-202ENST00000540876 CEP112Q8N8E3 955 aa11.1□□□□□ -0.63
CLDN2-202ENST00000540876 MICAL1Q8TDZ2 1067 aa11.1□□□□□ -0.63
CLDN2-202ENST00000540876 CYP27B1O15528 508 aa11.1□□□□□ -0.63
CLDN2-202ENST00000540876 IL2RBP14784 551 aa11.1□□□□□ -0.63
CLDN2-202ENST00000540876 CCT2P78371 535 aaKnown RBP11.1□□□□□ -0.63
CLDN2-202ENST00000540876 CEP85LQ5SZL2 805 aa11.1□□□□□ -0.63
CLDN2-202ENST00000540876 IGSF22Q8N9C0 903 aa11.1□□□□□ -0.63
CLDN2-202ENST00000540876 OSBPL3Q9H4L5 887 aa11.1□□□□□ -0.63
CLDN2-202ENST00000540876 KAT14Q9H8E8 782 aa11.1□□□□□ -0.63
CLDN2-202ENST00000540876 PPP2R2CQ9Y2T4 447 aa11.1□□□□□ -0.63
CLDN2-202ENST00000540876 LMO7Q8WWI1 1683 aa11.1□□□□□ -0.63
CLDN2-202ENST00000540876 TMCO5BA8MYB1 307 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 KINO60870 393 aaKnown RBP11.09□□□□□ -0.63
CLDN2-202ENST00000540876 VSNL1P62760 191 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 TRAF1Q13077 416 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 IL17REQ8NFR9 667 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 CRB1P82279 1406 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 SPATA31A1Q5TZJ5 1347 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 POTEB2H3BUK9 544 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 SLC4A2P04920 1241 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 RPSAP08865 295 aaKnown RBP11.09□□□□□ -0.63
CLDN2-202ENST00000540876 USP5P45974 858 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 SRGAP1Q7Z6B7 1085 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 RIN2Q8WYP3 895 aaPredicted RBP11.09□□□□□ -0.63
CLDN2-202ENST00000540876 QTRT2Q9H974 415 aaKnown RBP11.09□□□□□ -0.63
CLDN2-202ENST00000540876 HYPKQ9NX55 129 aa11.09□□□□□ -0.63
CLDN2-202ENST00000540876 ENO4A6NNW6 628 aa11.08□□□□□ -0.63
CLDN2-202ENST00000540876 F6X3S4 739 aa11.08□□□□□ -0.63
CLDN2-202ENST00000540876 SNUPNO95149 360 aaKnown RBP11.08□□□□□ -0.63
CLDN2-202ENST00000540876 FNTAP49354 379 aa11.08□□□□□ -0.63
CLDN2-202ENST00000540876 IRAK1P51617 712 aa11.08□□□□□ -0.63
CLDN2-202ENST00000540876 NAP1L1P55209 391 aaKnown RBP11.08□□□□□ -0.63
CLDN2-202ENST00000540876 KARSQ15046 597 aaKnown RBP11.08□□□□□ -0.63
CLDN2-202ENST00000540876 MSL3Q8N5Y2 521 aaKnown RBP11.08□□□□□ -0.63
CLDN2-202ENST00000540876 KLC4Q9NSK0 619 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms