RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ATRNL1Q5VV63 1379 aa9.23□□□□□ -0.93
YBX3-209ENST00000540747 INPP5BP32019 993 aa9.22□□□□□ -0.93
YBX3-209ENST00000540747 BCAMP50895 628 aa9.22□□□□□ -0.93
YBX3-209ENST00000540747 PPATQ06203 517 aa9.22□□□□□ -0.93
YBX3-209ENST00000540747 CHAF1AQ13111 956 aaPredicted RBP9.22□□□□□ -0.93
YBX3-209ENST00000540747 NOL9Q5SY16 702 aaKnown RBP9.22□□□□□ -0.93
YBX3-209ENST00000540747 ANKRD23Q86SG2 305 aa9.22□□□□□ -0.93
YBX3-209ENST00000540747 TRIM47Q96LD4 638 aa9.22□□□□□ -0.93
YBX3-209ENST00000540747 SRRDQ9UH36 339 aa9.22□□□□□ -0.93
YBX3-209ENST00000540747 ZBTB22O15209 634 aa9.21□□□□□ -0.94
YBX3-209ENST00000540747 RFX5P48382 616 aaPredicted RBP9.21□□□□□ -0.94
YBX3-209ENST00000540747 MTFR1Q15390 333 aa9.21□□□□□ -0.94
YBX3-209ENST00000540747 SLC4A8Q2Y0W8 1093 aa9.21□□□□□ -0.94
YBX3-209ENST00000540747 METTL24Q5JXM2 366 aa9.21□□□□□ -0.94
YBX3-209ENST00000540747 HOOK2Q96ED9 719 aa9.21□□□□□ -0.94
YBX3-209ENST00000540747 ZNF341Q9BYN7 854 aa9.21□□□□□ -0.94
YBX3-209ENST00000540747 MAST3O60307 1309 aa9.21□□□□□ -0.94
YBX3-209ENST00000540747 COL6A3P12111 3177 aa9.21□□□□□ -0.94
YBX3-209ENST00000540747 RFX7Q2KHR2 1363 aa9.21□□□□□ -0.94
YBX3-209ENST00000540747 BCRP11274 1271 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 OSBPP22059 807 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 NFIAQ12857 509 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 KIF22Q14807 665 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 PUM3Q15397 648 aaKnown RBP9.2□□□□□ -0.94
YBX3-209ENST00000540747 CAVIN4Q5BKX8 364 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 DCAF15Q66K64 600 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 GPAT2Q6NUI2 795 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 SLC4A10Q6U841 1118 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.2□□□□□ -0.94
YBX3-209ENST00000540747 KLHDC4Q8TBB5 520 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 FAM151AQ8WW52 585 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 MRS2Q9HD23 443 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 TMOD2Q9NZR1 351 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 FAM198AQ9UFP1 575 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 CPA4Q9UI42 421 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 DAGLAQ9Y4D2 1042 aa9.2□□□□□ -0.94
YBX3-209ENST00000540747 PDHXO00330 501 aa9.19□□□□□ -0.94
YBX3-209ENST00000540747 WDHD1O75717 1129 aaPredicted RBP9.19□□□□□ -0.94
YBX3-209ENST00000540747 GJB1P08034 283 aa9.19□□□□□ -0.94
YBX3-209ENST00000540747 PSMC4P43686 418 aa9.19□□□□□ -0.94
YBX3-209ENST00000540747 GJA8P48165 433 aa9.19□□□□□ -0.94
YBX3-209ENST00000540747 CDC42EP5Q6NZY7 148 aa9.19□□□□□ -0.94
YBX3-209ENST00000540747 MIGA2Q7L4E1 593 aa9.19□□□□□ -0.94
YBX3-209ENST00000540747 ATG9AQ7Z3C6 839 aa9.19□□□□□ -0.94
YBX3-209ENST00000540747 VPS37DQ86XT2 251 aa9.19□□□□□ -0.94
YBX3-209ENST00000540747 MRPL50Q8N5N7 158 aaKnown RBP9.19□□□□□ -0.94
YBX3-209ENST00000540747 USP44Q9H0E7 712 aa9.19□□□□□ -0.94
YBX3-209ENST00000540747 SALL2Q9Y467 1007 aaPredicted RBP9.19□□□□□ -0.94
YBX3-209ENST00000540747 PHF20L1A8MW92 1017 aa9.18□□□□□ -0.94
YBX3-209ENST00000540747 EYA2O00167 538 aa9.18□□□□□ -0.94
YBX3-209ENST00000540747 MYCP01106 439 aaPredicted RBP9.18□□□□□ -0.94
YBX3-209ENST00000540747 IFIT1P09914 478 aaKnown RBP9.18□□□□□ -0.94
YBX3-209ENST00000540747 GRK4P32298 578 aa9.18□□□□□ -0.94
YBX3-209ENST00000540747 MAP3K10Q02779 954 aa9.18□□□□□ -0.94
YBX3-209ENST00000540747 DIXDC1Q155Q3 683 aa9.18□□□□□ -0.94
YBX3-209ENST00000540747 CHRDL2Q6WN34 429 aa9.18□□□□□ -0.94
YBX3-209ENST00000540747 WDR66Q8TBY9 1149 aa9.18□□□□□ -0.94
YBX3-209ENST00000540747 SALL1Q9NSC2 1324 aa9.18□□□□□ -0.94
YBX3-209ENST00000540747 RBM27Q9P2N5 1060 aaKnown RBP9.18□□□□□ -0.94
YBX3-209ENST00000540747 GAKO14976 1311 aa9.17□□□□□ -0.94
YBX3-209ENST00000540747 PTPRCP08575 1304 aa9.17□□□□□ -0.94
YBX3-209ENST00000540747 MYPNQ86TC9 1320 aa9.17□□□□□ -0.94
YBX3-209ENST00000540747 A0A0G2JLL6 359 aaPredicted RBP9.17□□□□□ -0.94
YBX3-209ENST00000540747 CXCL11O14625 94 aa9.17□□□□□ -0.94
YBX3-209ENST00000540747 FRAT2O75474 233 aaPredicted RBP9.17□□□□□ -0.94
YBX3-209ENST00000540747 CCL5P13501 91 aa9.17□□□□□ -0.94
YBX3-209ENST00000540747 PRDX5P30044 214 aa9.17□□□□□ -0.94
YBX3-209ENST00000540747 PRKCZQ05513 592 aa9.17□□□□□ -0.94
YBX3-209ENST00000540747 PRRT2Q7Z6L0 340 aaPredicted RBP9.17□□□□□ -0.94
YBX3-209ENST00000540747 ZFPM1Q8IX07 1006 aa9.17□□□□□ -0.94
YBX3-209ENST00000540747 NKX2-3Q8TAU0 364 aa9.17□□□□□ -0.94
YBX3-209ENST00000540747 LPIN2Q92539 896 aa9.17□□□□□ -0.94
YBX3-209ENST00000540747 PARK7Q99497 189 aaKnown RBP9.17□□□□□ -0.94
YBX3-209ENST00000540747 ZBTB7BO15156 539 aaPredicted RBP9.16□□□□□ -0.94
YBX3-209ENST00000540747 CYP2C8P10632 490 aa9.16□□□□□ -0.94
YBX3-209ENST00000540747 SLC5A1P13866 664 aa9.16□□□□□ -0.94
YBX3-209ENST00000540747 HOXD10P28358 340 aa9.16□□□□□ -0.94
YBX3-209ENST00000540747 SH3BP5LQ7L8J4 393 aa9.16□□□□□ -0.94
YBX3-209ENST00000540747 RAET1EQ8TD07 263 aa9.16□□□□□ -0.94
YBX3-209ENST00000540747 IDI2Q9BXS1 227 aa9.16□□□□□ -0.94
YBX3-209ENST00000540747 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
YBX3-209ENST00000540747 GABRQQ9UN88 632 aa9.16□□□□□ -0.94
YBX3-209ENST00000540747 SLC45A1Q9Y2W3 748 aa9.16□□□□□ -0.94
YBX3-209ENST00000540747 PTPRFP10586 1907 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 ENTPD3O75355 529 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 CIAO1O76071 339 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
YBX3-209ENST00000540747 PTPRAP18433 802 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 TCP10Q12799 353 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 IRF5Q13568 498 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 SCYL3Q8IZE3 742 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 SLAIN1Q8ND83 568 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 U2AF1L4Q8WU68 220 aaKnown RBP9.15□□□□□ -0.94
YBX3-209ENST00000540747 SSH1Q8WYL5 1049 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 AFG3L2Q9Y4W6 797 aa9.15□□□□□ -0.94
YBX3-209ENST00000540747 MYH13Q9UKX3 1938 aa9.15□□□□□ -0.95
YBX3-209ENST00000540747 MGAMO43451 1857 aa9.15□□□□□ -0.95
YBX3-209ENST00000540747 PHIPQ8WWQ0 1821 aa9.15□□□□□ -0.95
YBX3-209ENST00000540747 DOCK2Q92608 1830 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms