RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 TDRD7Q8NHU6 1098 aaKnown RBP11.3□□□□□ -0.6
PAAF1-209ENST00000540659 NCOA7Q8NI08 942 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 SDR42E1Q8WUS8 393 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 FBXW7Q969H0 707 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 NSUN4Q96CB9 384 aaKnown RBP11.3□□□□□ -0.6
PAAF1-209ENST00000540659 GBP4Q96PP9 640 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 ATP6V0A2Q9Y487 856 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 PDS5AQ29RF7 1337 aaKnown RBP11.3□□□□□ -0.6
PAAF1-209ENST00000540659 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 DUOX1Q9NRD9 1551 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 MYH2Q9UKX2 1941 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 GSG1L2A8MUP6 293 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 H0YIN7 160 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 PRC1O43663 620 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 GRIN3BO60391 1043 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 EXOSC10Q01780 885 aaKnown RBP11.29□□□□□ -0.6
PAAF1-209ENST00000540659 TRDNQ13061 729 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 SPTY2D1Q68D10 685 aaPredicted RBP11.29□□□□□ -0.6
PAAF1-209ENST00000540659 C15orf52Q6ZUT6 534 aaKnown RBP11.29□□□□□ -0.6
PAAF1-209ENST00000540659 TBC1D10CQ8IV04 446 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 MPNDQ8N594 471 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 ZNF384Q8TF68 577 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 NACAP1Q9BZK3 213 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 CD209Q9NNX6 404 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 AATFQ9NY61 560 aaKnown RBP eCLIP11.29□□□□□ -0.6
PAAF1-209ENST00000540659 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
PAAF1-209ENST00000540659 NAV1Q8NEY1 1877 aa11.28□□□□□ -0.6
PAAF1-209ENST00000540659 ZBTB22O15209 634 aa11.28□□□□□ -0.6
PAAF1-209ENST00000540659 LDHBP07195 334 aaKnown RBP11.28□□□□□ -0.6
PAAF1-209ENST00000540659 DALRD3Q5D0E6 543 aaKnown RBP11.28□□□□□ -0.6
PAAF1-209ENST00000540659 CC2D2BQ6DHV5 1058 aa11.28□□□□□ -0.6
PAAF1-209ENST00000540659 DPP8Q6V1X1 898 aaPredicted RBP11.28□□□□□ -0.6
PAAF1-209ENST00000540659 MB21D2Q8IYB1 491 aaPredicted RBP11.28□□□□□ -0.6
PAAF1-209ENST00000540659 WDR66Q8TBY9 1149 aa11.28□□□□□ -0.6
PAAF1-209ENST00000540659 RIOK1Q9BRS2 568 aaKnown RBP11.28□□□□□ -0.6
PAAF1-209ENST00000540659 INCENPQ9NQS7 918 aa11.28□□□□□ -0.6
PAAF1-209ENST00000540659 TOMM22Q9NS69 142 aa11.28□□□□□ -0.6
PAAF1-209ENST00000540659 ZDHHC9Q9Y397 364 aa11.28□□□□□ -0.6
PAAF1-209ENST00000540659 NEDD4P46934 1319 aa11.28□□□□□ -0.6
PAAF1-209ENST00000540659 SBF1O95248 1867 aa11.27□□□□□ -0.6
PAAF1-209ENST00000540659 MINDY4BA8MYZ0 360 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 B4E1Z4 1266 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 G3V3G9 751 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 MCM5P33992 734 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 ALX1Q15699 326 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 GRIK5Q16478 980 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 DOK7Q18PE1 504 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 RRP12Q5JTH9 1297 aaKnown RBP11.27□□□□□ -0.61
PAAF1-209ENST00000540659 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 CNKSR1Q969H4 720 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
PAAF1-209ENST00000540659 ZMYM6O95789 1325 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 SALL1Q9NSC2 1324 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 FER1L6Q2WGJ9 1857 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 CDK5RAP2Q96SN8 1893 aa11.27□□□□□ -0.61
PAAF1-209ENST00000540659 DDX11L8A8MPP1 907 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 BAG4O95429 457 aaKnown RBP11.26□□□□□ -0.61
PAAF1-209ENST00000540659 BRD1O95696 1058 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 IL1R1P14778 569 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 YY1P25490 414 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 ANTXR2P58335 489 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 CCT2P78371 535 aaKnown RBP11.26□□□□□ -0.61
PAAF1-209ENST00000540659 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
PAAF1-209ENST00000540659 MCTP1Q6DN14 999 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 STYK1Q6J9G0 422 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
PAAF1-209ENST00000540659 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 TTLL6Q8N841 843 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 NKX2-3Q8TAU0 364 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 GTF3C6Q969F1 213 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 ZC3H12CQ9C0D7 883 aaKnown RBP11.26□□□□□ -0.61
PAAF1-209ENST00000540659 TACC3Q9Y6A5 838 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
PAAF1-209ENST00000540659 GTF2IP78347 998 aa11.25□□□□□ -0.61
PAAF1-209ENST00000540659 GSTO1P78417 241 aa11.25□□□□□ -0.61
PAAF1-209ENST00000540659 PPARAQ07869 468 aa11.25□□□□□ -0.61
PAAF1-209ENST00000540659 SCRN1Q12765 414 aa11.25□□□□□ -0.61
PAAF1-209ENST00000540659 DIXDC1Q155Q3 683 aa11.25□□□□□ -0.61
PAAF1-209ENST00000540659 SLC4A8Q2Y0W8 1093 aa11.25□□□□□ -0.61
PAAF1-209ENST00000540659 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
PAAF1-209ENST00000540659 MFSD6Q6ZSS7 791 aa11.25□□□□□ -0.61
PAAF1-209ENST00000540659 CHAMP1Q96JM3 812 aa11.25□□□□□ -0.61
PAAF1-209ENST00000540659 NOL10Q9BSC4 688 aaKnown RBP11.25□□□□□ -0.61
PAAF1-209ENST00000540659 CRNKL1Q9BZJ0 848 aaKnown RBP11.25□□□□□ -0.61
PAAF1-209ENST00000540659 ECM29Q5VYK3 1845 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 CYP2D7A0A087X1C5 515 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 KLF18A0A0U1RQI7 1052 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-209ENST00000540659 GOLGA6L22H0YM25 854 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 STX6O43752 255 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 JAK2O60674 1132 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 PFKFB2O60825 505 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 SYT1P21579 422 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 USP5P45974 858 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 FOSBP53539 338 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 AKNAD1Q5T1N1 836 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 CERS3Q8IU89 383 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms