RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TTLL12Q14166 644 aaPredicted RBP22.4■■□□□ 1.18
SNRPA1-203ENST00000540017 FAM163AQ96GL9 167 aaPredicted RBP22.4■■□□□ 1.18
SNRPA1-203ENST00000540017 ZIC5Q96T25 663 aa22.4■■□□□ 1.18
SNRPA1-203ENST00000540017 PIH1D3Q9NQM4 214 aaKnown RBP22.4■■□□□ 1.18
SNRPA1-203ENST00000540017 RAI14Q9P0K7 980 aa22.4■■□□□ 1.18
SNRPA1-203ENST00000540017 MYO5AQ9Y4I1 1855 aaKnown RBP22.39■■□□□ 1.18
SNRPA1-203ENST00000540017 ZNF157P51786 506 aaPredicted RBP22.39■■□□□ 1.17
SNRPA1-203ENST00000540017 LRRCC1Q9C099 1032 aa22.39■■□□□ 1.17
SNRPA1-203ENST00000540017 USP40Q9NVE5 1235 aa22.39■■□□□ 1.17
SNRPA1-203ENST00000540017 TMOD2Q9NZR1 351 aa22.39■■□□□ 1.17
SNRPA1-203ENST00000540017 LRP2BPQ9P2M1 347 aa22.39■■□□□ 1.17
SNRPA1-203ENST00000540017 MROH7-TTC4A0A0A0MT08 1334 aa22.38■■□□□ 1.17
SNRPA1-203ENST00000540017 IFIT2P09913 472 aaKnown RBP22.38■■□□□ 1.17
SNRPA1-203ENST00000540017 HSPA1AP0DMV8 641 aaKnown RBP22.38■■□□□ 1.17
SNRPA1-203ENST00000540017 HSPA1BP0DMV9 641 aaKnown RBP22.38■■□□□ 1.17
SNRPA1-203ENST00000540017 TNNI2P48788 182 aa22.38■■□□□ 1.17
SNRPA1-203ENST00000540017 NFIAQ12857 509 aa22.38■■□□□ 1.17
SNRPA1-203ENST00000540017 SUPT20HL1Q3ZLR7 823 aa22.38■■□□□ 1.17
SNRPA1-203ENST00000540017 FKBP1CQ5VVH2 108 aa22.38■■□□□ 1.17
SNRPA1-203ENST00000540017 ANGEL1Q9UNK9 670 aaKnown RBP22.38■■□□□ 1.17
SNRPA1-203ENST00000540017 BTDP43251 543 aa22.37■■□□□ 1.17
SNRPA1-203ENST00000540017 LDLRAD1Q5T700 205 aa22.37■■□□□ 1.17
SNRPA1-203ENST00000540017 FAM83AQ86UY5 434 aa22.37■■□□□ 1.17
SNRPA1-203ENST00000540017 ANTXR1Q9H6X2 564 aa22.37■■□□□ 1.17
SNRPA1-203ENST00000540017 FAM198AQ9UFP1 575 aa22.37■■□□□ 1.17
SNRPA1-203ENST00000540017 GPR75-ASB3A0A0A6YYF3 556 aa22.36■■□□□ 1.17
SNRPA1-203ENST00000540017 USP2O75604 605 aaPredicted RBP22.36■■□□□ 1.17
SNRPA1-203ENST00000540017 SLC10A3P09131 477 aa22.36■■□□□ 1.17
SNRPA1-203ENST00000540017 MAP3K11Q16584 847 aa22.36■■□□□ 1.17
SNRPA1-203ENST00000540017 ARMC9Q7Z3E5 817 aa22.36■■□□□ 1.17
SNRPA1-203ENST00000540017 SLF2Q8IX21 1173 aa22.36■■□□□ 1.17
SNRPA1-203ENST00000540017 EXOC6Q8TAG9 804 aa22.36■■□□□ 1.17
SNRPA1-203ENST00000540017 MAP2K2P36507 400 aa22.35■■□□□ 1.17
SNRPA1-203ENST00000540017 RHBDL3P58872 404 aa22.35■■□□□ 1.17
SNRPA1-203ENST00000540017 TCP10Q12799 353 aa22.35■■□□□ 1.17
SNRPA1-203ENST00000540017 RASAL3Q86YV0 1011 aa22.35■■□□□ 1.17
SNRPA1-203ENST00000540017 ZFPM1Q8IX07 1006 aa22.35■■□□□ 1.17
SNRPA1-203ENST00000540017 CCDC102AQ96A19 550 aa22.35■■□□□ 1.17
SNRPA1-203ENST00000540017 WBP1LQ9NX94 342 aa22.35■■□□□ 1.17
SNRPA1-203ENST00000540017 PPP1R12BO60237 982 aaPredicted RBP22.34■■□□□ 1.17
SNRPA1-203ENST00000540017 GSTO1P78417 241 aa22.34■■□□□ 1.17
SNRPA1-203ENST00000540017 ADGRA1Q86SQ6 560 aa22.34■■□□□ 1.17
SNRPA1-203ENST00000540017 FAM151AQ8WW52 585 aa22.34■■□□□ 1.17
SNRPA1-203ENST00000540017 RFX7Q2KHR2 1363 aa22.34■■□□□ 1.17
SNRPA1-203ENST00000540017 MAST2Q6P0Q8 1798 aa22.33■■□□□ 1.17
SNRPA1-203ENST00000540017 WDHD1O75717 1129 aaPredicted RBP22.33■■□□□ 1.17
SNRPA1-203ENST00000540017 LDHCP07864 332 aa22.33■■□□□ 1.17
SNRPA1-203ENST00000540017 NOGQ13253 232 aa22.33■■□□□ 1.17
SNRPA1-203ENST00000540017 NAA16Q6N069 864 aaPredicted RBP22.33■■□□□ 1.17
SNRPA1-203ENST00000540017 CLMNQ96JQ2 1002 aa22.33■■□□□ 1.17
SNRPA1-203ENST00000540017 IDI2Q9BXS1 227 aa22.33■■□□□ 1.17
SNRPA1-203ENST00000540017 DDX4Q9NQI0 724 aaKnown RBP22.33■■□□□ 1.17
SNRPA1-203ENST00000540017 RGS3P49796 1198 aa22.32■■□□□ 1.16
SNRPA1-203ENST00000540017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.32■■□□□ 1.16
SNRPA1-203ENST00000540017 RPAP1Q9BWH6 1393 aaPredicted RBP22.32■■□□□ 1.16
SNRPA1-203ENST00000540017 FOXN1O15353 648 aa22.31■■□□□ 1.16
SNRPA1-203ENST00000540017 IDH1O75874 414 aaKnown RBP22.31■■□□□ 1.16
SNRPA1-203ENST00000540017 ATP5JP18859 108 aa22.31■■□□□ 1.16
SNRPA1-203ENST00000540017 KIF23Q02241 960 aaPredicted RBP22.31■■□□□ 1.16
SNRPA1-203ENST00000540017 EDC3Q96F86 508 aaKnown RBP22.31■■□□□ 1.16
SNRPA1-203ENST00000540017 DOCK2Q92608 1830 aa22.3■■□□□ 1.16
SNRPA1-203ENST00000540017 MAP2K1Q02750 393 aaPredicted RBP22.3■■□□□ 1.16
SNRPA1-203ENST00000540017 DNAJC2Q99543 621 aaKnown RBP22.3■■□□□ 1.16
SNRPA1-203ENST00000540017 BOLA2Q9H3K6 86 aa22.3■■□□□ 1.16
SNRPA1-203ENST00000540017 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.3■■□□□ 1.16
SNRPA1-203ENST00000540017 OTOFQ9HC10 1997 aa22.29■■□□□ 1.16
SNRPA1-203ENST00000540017 ENTPD3O75355 529 aa22.29■■□□□ 1.16
SNRPA1-203ENST00000540017 IREB2P48200 963 aaKnown RBP22.29■■□□□ 1.16
SNRPA1-203ENST00000540017 HDAC1Q13547 482 aaPredicted RBP22.29■■□□□ 1.16
SNRPA1-203ENST00000540017 SH3BP5LQ7L8J4 393 aa22.29■■□□□ 1.16
SNRPA1-203ENST00000540017 SH3RF3Q8TEJ3 882 aaPredicted RBP22.29■■□□□ 1.16
SNRPA1-203ENST00000540017 AATFQ9NY61 560 aaKnown RBP eCLIP22.29■■□□□ 1.16
SNRPA1-203ENST00000540017 GOLIM4O00461 696 aa22.28■■□□□ 1.16
SNRPA1-203ENST00000540017 CYP7A1P22680 504 aa22.28■■□□□ 1.16
SNRPA1-203ENST00000540017 IRX6P78412 446 aaPredicted RBP22.28■■□□□ 1.16
SNRPA1-203ENST00000540017 MKRN3Q13064 507 aaKnown RBP22.28■■□□□ 1.16
SNRPA1-203ENST00000540017 PICALMQ13492 652 aa22.28■■□□□ 1.16
SNRPA1-203ENST00000540017 AAMPQ13685 434 aa22.28■■□□□ 1.16
SNRPA1-203ENST00000540017 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.28■■□□□ 1.16
SNRPA1-203ENST00000540017 MIGA2Q7L4E1 593 aa22.28■■□□□ 1.16
SNRPA1-203ENST00000540017 MAGEB6Q8N7X4 407 aa22.28■■□□□ 1.16
SNRPA1-203ENST00000540017 DDTLA6NHG4 134 aaPredicted RBP22.27■■□□□ 1.16
SNRPA1-203ENST00000540017 IGSF3O75054 1194 aa22.27■■□□□ 1.16
SNRPA1-203ENST00000540017 PPP4CP60510 307 aa22.27■■□□□ 1.16
SNRPA1-203ENST00000540017 DYNLL1P63167 89 aaKnown RBP22.27■■□□□ 1.16
SNRPA1-203ENST00000540017 TSHZ3Q63HK5 1081 aa22.27■■□□□ 1.16
SNRPA1-203ENST00000540017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.27■■□□□ 1.16
SNRPA1-203ENST00000540017 SLC10A4Q96EP9 437 aa22.27■■□□□ 1.16
SNRPA1-203ENST00000540017 CSRNP1Q96S65 589 aa22.27■■□□□ 1.16
SNRPA1-203ENST00000540017 HAUS7Q99871 368 aa22.27■■□□□ 1.16
SNRPA1-203ENST00000540017 SLURP2P0DP57 97 aa22.26■■□□□ 1.15
SNRPA1-203ENST00000540017 MAP3K12Q12852 859 aa22.26■■□□□ 1.15
SNRPA1-203ENST00000540017 TTF1Q15361 905 aaPredicted RBP22.26■■□□□ 1.15
SNRPA1-203ENST00000540017 SPRYD7Q5W111 196 aa22.26■■□□□ 1.15
SNRPA1-203ENST00000540017 ANKRD13AQ8IZ07 590 aa22.26■■□□□ 1.15
SNRPA1-203ENST00000540017 OTUD7AQ8TE49 926 aaPredicted RBP22.26■■□□□ 1.15
SNRPA1-203ENST00000540017 PAG1Q9NWQ8 432 aa22.26■■□□□ 1.15
SNRPA1-203ENST00000540017 AK9Q5TCS8 1911 aa22.25■■□□□ 1.15
SNRPA1-203ENST00000540017 ATRNL1Q5VV63 1379 aa22.25■■□□□ 1.15
SNRPA1-203ENST00000540017 UNCXA6NJT0 531 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms