RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 WDR19Q8NEZ3 1342 aa26.45■■□□□ 1.82
HOMER3-204ENST00000539827 NPR1P16066 1061 aa26.45■■□□□ 1.82
HOMER3-204ENST00000539827 SPTY2D1Q68D10 685 aaPredicted RBP26.45■■□□□ 1.82
HOMER3-204ENST00000539827 WDR66Q8TBY9 1149 aa26.45■■□□□ 1.82
HOMER3-204ENST00000539827 C6orf229H3BNL8 230 aa26.44■■□□□ 1.82
HOMER3-204ENST00000539827 PDE6BP35913 854 aa26.44■■□□□ 1.82
HOMER3-204ENST00000539827 AKNAD1Q5T1N1 836 aa26.44■■□□□ 1.82
HOMER3-204ENST00000539827 CD209Q9NNX6 404 aa26.44■■□□□ 1.82
HOMER3-204ENST00000539827 STK32BQ9NY57 414 aa26.44■■□□□ 1.82
HOMER3-204ENST00000539827 DDX49Q9Y6V7 483 aaKnown RBP26.44■■□□□ 1.82
HOMER3-204ENST00000539827 KLF18A0A0U1RQI7 1052 aa26.44■■□□□ 1.82
HOMER3-204ENST00000539827 CTDNEP1O95476 244 aa26.44■■□□□ 1.82
HOMER3-204ENST00000539827 EVCP57679 992 aa26.44■■□□□ 1.82
HOMER3-204ENST00000539827 TMC4Q7Z404 712 aa26.44■■□□□ 1.82
HOMER3-204ENST00000539827 DZIP1Q86YF9 867 aaKnown RBP26.44■■□□□ 1.82
HOMER3-204ENST00000539827 AATFQ9NY61 560 aaKnown RBP eCLIP26.44■■□□□ 1.82
HOMER3-204ENST00000539827 CHD4Q14839 1912 aa26.43■■□□□ 1.82
HOMER3-204ENST00000539827 MINDY4BA8MYZ0 360 aa26.43■■□□□ 1.82
HOMER3-204ENST00000539827 PDCP20941 246 aa26.43■■□□□ 1.82
HOMER3-204ENST00000539827 RAB11FIP4Q86YS3 637 aa26.43■■□□□ 1.82
HOMER3-204ENST00000539827 NSUN7Q8NE18 718 aaKnown RBP26.43■■□□□ 1.82
HOMER3-204ENST00000539827 LLPHQ9BRT6 129 aaKnown RBP26.43■■□□□ 1.82
HOMER3-204ENST00000539827 ATP6V0A2Q9Y487 856 aa26.43■■□□□ 1.82
HOMER3-204ENST00000539827 CCDC88AQ3V6T2 1871 aa26.43■■□□□ 1.82
HOMER3-204ENST00000539827 SALL1Q9NSC2 1324 aa26.43■■□□□ 1.82
HOMER3-204ENST00000539827 GRIK5Q16478 980 aa26.42■■□□□ 1.82
HOMER3-204ENST00000539827 MFSD6Q6ZSS7 791 aa26.42■■□□□ 1.82
HOMER3-204ENST00000539827 SMARCC2Q8TAQ2 1214 aa26.42■■□□□ 1.82
HOMER3-204ENST00000539827 MAST2Q6P0Q8 1798 aa26.42■■□□□ 1.82
HOMER3-204ENST00000539827 LRRC37AA6NMS7 1700 aa26.42■■□□□ 1.82
HOMER3-204ENST00000539827 TIAM2Q8IVF5 1701 aa26.42■■□□□ 1.82
HOMER3-204ENST00000539827 LDHBP07195 334 aaKnown RBP26.42■■□□□ 1.82
HOMER3-204ENST00000539827 PPARAQ07869 468 aa26.42■■□□□ 1.82
HOMER3-204ENST00000539827 RRP12Q5JTH9 1297 aaKnown RBP26.42■■□□□ 1.82
HOMER3-204ENST00000539827 OLFM4Q6UX06 510 aa26.42■■□□□ 1.82
HOMER3-204ENST00000539827 SH2B2O14492 632 aaPredicted RBP26.41■■□□□ 1.82
HOMER3-204ENST00000539827 CDC37L1Q7L3B6 337 aa26.41■■□□□ 1.82
HOMER3-204ENST00000539827 STAG1Q8WVM7 1258 aa26.41■■□□□ 1.82
HOMER3-204ENST00000539827 GDPD2Q9HCC8 539 aa26.41■■□□□ 1.82
HOMER3-204ENST00000539827 TOMM22Q9NS69 142 aa26.41■■□□□ 1.82
HOMER3-204ENST00000539827 COL11A2P13942 1736 aaPredicted RBP26.41■■□□□ 1.82
HOMER3-204ENST00000539827 PTPDC1A2A3K4 754 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 KDM4AO75164 1064 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 NCLP19338 710 aaKnown RBP26.4■■□□□ 1.82
HOMER3-204ENST00000539827 GOLGA8BA8MQT2 603 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 SMIM22K7EJ46 135 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 PPFIA3O75145 1194 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 IL1R1P14778 569 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 FAM184AQ8NB25 1140 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 MASTLQ96GX5 879 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 KRT23Q9C075 422 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 CNNM2Q9H8M5 875 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 ZSWIM5Q9P217 1185 aa26.4■■□□□ 1.82
HOMER3-204ENST00000539827 ANGEL1Q9UNK9 670 aaKnown RBP26.4■■□□□ 1.82
HOMER3-204ENST00000539827 RIMBP2O15034 1052 aa26.39■■□□□ 1.82
HOMER3-204ENST00000539827 ALDH1B1P30837 517 aa26.39■■□□□ 1.82
HOMER3-204ENST00000539827 KLHL40Q2TBA0 621 aa26.39■■□□□ 1.82
HOMER3-204ENST00000539827 ZNF622Q969S3 477 aaKnown RBP eCLIP26.39■■□□□ 1.82
HOMER3-204ENST00000539827 SENP2Q9HC62 589 aa26.39■■□□□ 1.82
HOMER3-204ENST00000539827 HPS5Q9UPZ3 1129 aa26.39■■□□□ 1.82
HOMER3-204ENST00000539827 CNPY2Q9Y2B0 182 aa26.39■■□□□ 1.82
HOMER3-204ENST00000539827 CYP2D7A0A087X1C5 515 aa26.38■■□□□ 1.81
HOMER3-204ENST00000539827 FERMT3Q86UX7 667 aa26.38■■□□□ 1.81
HOMER3-204ENST00000539827 LTBP1Q14766 1721 aa26.38■■□□□ 1.81
HOMER3-204ENST00000539827 C2CD5Q86YS7 1000 aa26.38■■□□□ 1.81
HOMER3-204ENST00000539827 IGDCC4Q8TDY8 1250 aa26.38■■□□□ 1.81
HOMER3-204ENST00000539827 TMEM87BQ96K49 555 aa26.38■■□□□ 1.81
HOMER3-204ENST00000539827 CRNKL1Q9BZJ0 848 aaKnown RBP26.38■■□□□ 1.81
HOMER3-204ENST00000539827 ATP6V1DQ9Y5K8 247 aa26.38■■□□□ 1.81
HOMER3-204ENST00000539827 BAZ2AQ9UIF9 1905 aaKnown RBP26.38■■□□□ 1.81
HOMER3-204ENST00000539827 TCHHQ07283 1943 aa26.37■■□□□ 1.81
HOMER3-204ENST00000539827 PDIA4P13667 645 aaKnown RBP26.37■■□□□ 1.81
HOMER3-204ENST00000539827 FOSBP53539 338 aa26.37■■□□□ 1.81
HOMER3-204ENST00000539827 TMEM67Q5HYA8 995 aa26.37■■□□□ 1.81
HOMER3-204ENST00000539827 USP48Q86UV5 1035 aa26.37■■□□□ 1.81
HOMER3-204ENST00000539827 MPNDQ8N594 471 aa26.37■■□□□ 1.81
HOMER3-204ENST00000539827 GPT2Q8TD30 523 aa26.37■■□□□ 1.81
HOMER3-204ENST00000539827 RNF41Q9H4P4 317 aaPredicted RBP26.37■■□□□ 1.81
HOMER3-204ENST00000539827 ANAPC4Q9UJX5 808 aa26.37■■□□□ 1.81
HOMER3-204ENST00000539827 HMGN5P82970 282 aaKnown RBP26.36■■□□□ 1.81
HOMER3-204ENST00000539827 DIXDC1Q155Q3 683 aa26.36■■□□□ 1.81
HOMER3-204ENST00000539827 CTR9Q6PD62 1173 aa26.36■■□□□ 1.81
HOMER3-204ENST00000539827 DEFB132Q7Z7B7 95 aa26.36■■□□□ 1.81
HOMER3-204ENST00000539827 IFIT3O14879 490 aaKnown RBP26.35■■□□□ 1.81
HOMER3-204ENST00000539827 TMED8Q6PL24 325 aaPredicted RBP26.35■■□□□ 1.81
HOMER3-204ENST00000539827 CHMP4CQ96CF2 233 aa26.35■■□□□ 1.81
HOMER3-204ENST00000539827 LY9Q9HBG7 655 aa26.35■■□□□ 1.81
HOMER3-204ENST00000539827 DNM1Q05193 864 aaKnown RBP26.35■■□□□ 1.81
HOMER3-204ENST00000539827 SF3B2Q13435 895 aaKnown RBP26.35■■□□□ 1.81
HOMER3-204ENST00000539827 GIMAP6Q6P9H5 292 aa26.35■■□□□ 1.81
HOMER3-204ENST00000539827 NFXL1Q6ZNB6 911 aa26.35■■□□□ 1.81
HOMER3-204ENST00000539827 ZKSCAN3Q9BRR0 538 aa26.35■■□□□ 1.81
HOMER3-204ENST00000539827 USP17L12C9JPN9 530 aa26.34■■□□□ 1.81
HOMER3-204ENST00000539827 USP17L21D6R901 530 aa26.34■■□□□ 1.81
HOMER3-204ENST00000539827 GSTO1P78417 241 aa26.34■■□□□ 1.81
HOMER3-204ENST00000539827 DCP1AQ9NPI6 582 aaPredicted RBP26.34■■□□□ 1.81
HOMER3-204ENST00000539827 H3BQV1 296 aa26.33■■□□□ 1.81
HOMER3-204ENST00000539827 IFFO2Q5TF58 517 aa26.33■■□□□ 1.81
HOMER3-204ENST00000539827 DPP8Q6V1X1 898 aaPredicted RBP26.33■■□□□ 1.81
HOMER3-204ENST00000539827 ILDR2Q71H61 639 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms