RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 IQSEC3Q9UPP2 1182 aaPredicted RBP23.43■■□□□ 1.34
LINC00943-205ENST00000539315 VGLL4Q14135 290 aa23.42■■□□□ 1.34
LINC00943-205ENST00000539315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.42■■□□□ 1.34
LINC00943-205ENST00000539315 MROH5Q6ZUA9 1318 aa23.41■■□□□ 1.34
LINC00943-205ENST00000539315 MTX1Q13505 466 aa23.41■■□□□ 1.34
LINC00943-205ENST00000539315 RABL6Q3YEC7 729 aaPredicted RBP23.41■■□□□ 1.34
LINC00943-205ENST00000539315 RBBP6Q7Z6E9 1792 aaKnown RBP23.4■■□□□ 1.34
LINC00943-205ENST00000539315 SRGAP3O43295 1099 aa23.4■■□□□ 1.34
LINC00943-205ENST00000539315 HDAC1Q13547 482 aaPredicted RBP23.4■■□□□ 1.34
LINC00943-205ENST00000539315 VGLL2Q8N8G2 317 aa23.4■■□□□ 1.34
LINC00943-205ENST00000539315 CEP290O15078 2479 aa23.39■■□□□ 1.34
LINC00943-205ENST00000539315 CCL15-CCL14A0A0B4J2E2 113 aa23.39■■□□□ 1.33
LINC00943-205ENST00000539315 EN2P19622 333 aaPredicted RBP23.39■■□□□ 1.33
LINC00943-205ENST00000539315 CACNB3P54284 484 aa23.39■■□□□ 1.33
LINC00943-205ENST00000539315 HDLBPQ00341 1268 aaKnown RBP23.39■■□□□ 1.33
LINC00943-205ENST00000539315 CHAF1AQ13111 956 aaPredicted RBP23.39■■□□□ 1.33
LINC00943-205ENST00000539315 CCL15Q16663 113 aa23.39■■□□□ 1.33
LINC00943-205ENST00000539315 TNNI2P48788 182 aa23.38■■□□□ 1.33
LINC00943-205ENST00000539315 SIRT2Q8IXJ6 389 aa23.38■■□□□ 1.33
LINC00943-205ENST00000539315 FAM43AQ8N2R8 423 aa23.38■■□□□ 1.33
LINC00943-205ENST00000539315 SSH3Q8TE77 659 aa23.38■■□□□ 1.33
LINC00943-205ENST00000539315 PDE8BO95263 885 aa23.37■■□□□ 1.33
LINC00943-205ENST00000539315 BCAMP50895 628 aa23.37■■□□□ 1.33
LINC00943-205ENST00000539315 GTF2A2P52657 109 aa23.37■■□□□ 1.33
LINC00943-205ENST00000539315 TAF1CQ15572 869 aaPredicted RBP23.37■■□□□ 1.33
LINC00943-205ENST00000539315 METTL24Q5JXM2 366 aa23.37■■□□□ 1.33
LINC00943-205ENST00000539315 B4GALNT3Q6L9W6 998 aa23.37■■□□□ 1.33
LINC00943-205ENST00000539315 VPS37DQ86XT2 251 aa23.37■■□□□ 1.33
LINC00943-205ENST00000539315 OTUD5Q96G74 571 aa23.37■■□□□ 1.33
LINC00943-205ENST00000539315 MRIQ9BWK5 157 aa23.37■■□□□ 1.33
LINC00943-205ENST00000539315 PNMA6EA0A0J9YXQ4 647 aa23.36■■□□□ 1.33
LINC00943-205ENST00000539315 POLA2Q14181 598 aa23.36■■□□□ 1.33
LINC00943-205ENST00000539315 APOBEC3HQ6NTF7 200 aaKnown RBP23.36■■□□□ 1.33
LINC00943-205ENST00000539315 KLHDC4Q8TBB5 520 aa23.36■■□□□ 1.33
LINC00943-205ENST00000539315 TBC1D22AQ8WUA7 517 aa23.36■■□□□ 1.33
LINC00943-205ENST00000539315 ZFYVE28Q9HCC9 887 aa23.36■■□□□ 1.33
LINC00943-205ENST00000539315 CSADQ9Y600 493 aa23.36■■□□□ 1.33
LINC00943-205ENST00000539315 SNCAIPQ9Y6H5 919 aa23.36■■□□□ 1.33
LINC00943-205ENST00000539315 SPDYE5A6NIY4 337 aa23.35■■□□□ 1.33
LINC00943-205ENST00000539315 IGHDP01880 384 aa23.35■■□□□ 1.33
LINC00943-205ENST00000539315 TEKT1Q969V4 418 aa23.35■■□□□ 1.33
LINC00943-205ENST00000539315 ZNF333Q96JL9 665 aa23.35■■□□□ 1.33
LINC00943-205ENST00000539315 ZDHHC15Q96MV8 337 aa23.35■■□□□ 1.33
LINC00943-205ENST00000539315 CAVIN4Q5BKX8 364 aa23.34■■□□□ 1.33
LINC00943-205ENST00000539315 ZKSCAN4Q969J2 545 aaPredicted RBP23.34■■□□□ 1.33
LINC00943-205ENST00000539315 GCC1Q96CN9 775 aa23.34■■□□□ 1.33
LINC00943-205ENST00000539315 PTCH2Q9Y6C5 1203 aa23.34■■□□□ 1.33
LINC00943-205ENST00000539315 FRAT2O75474 233 aaPredicted RBP23.33■■□□□ 1.33
LINC00943-205ENST00000539315 FGFR2P21802 821 aa23.33■■□□□ 1.33
LINC00943-205ENST00000539315 HABP4Q5JVS0 413 aaKnown RBP23.33■■□□□ 1.33
LINC00943-205ENST00000539315 FAM83AQ86UY5 434 aa23.33■■□□□ 1.33
LINC00943-205ENST00000539315 DCTPP1Q9H773 170 aa23.33■■□□□ 1.33
LINC00943-205ENST00000539315 BTBD19C9JJ37 291 aa23.32■■□□□ 1.32
LINC00943-205ENST00000539315 HSP90AB4PQ58FF6 505 aa23.32■■□□□ 1.32
LINC00943-205ENST00000539315 FKBP1CQ5VVH2 108 aa23.32■■□□□ 1.32
LINC00943-205ENST00000539315 CENPQQ7L2Z9 268 aaPredicted RBP23.32■■□□□ 1.32
LINC00943-205ENST00000539315 ZSWIM8A7E2V4 1837 aa23.31■■□□□ 1.32
LINC00943-205ENST00000539315 IRF6O14896 467 aa23.31■■□□□ 1.32
LINC00943-205ENST00000539315 SURF6O75683 361 aaKnown RBP23.31■■□□□ 1.32
LINC00943-205ENST00000539315 ERO1BQ86YB8 467 aa23.31■■□□□ 1.32
LINC00943-205ENST00000539315 WRNIP1Q96S55 665 aa23.31■■□□□ 1.32
LINC00943-205ENST00000539315 ARHGAP39Q9C0H5 1083 aa23.31■■□□□ 1.32
LINC00943-205ENST00000539315 TLR2O60603 784 aa23.3■■□□□ 1.32
LINC00943-205ENST00000539315 CETPP11597 493 aa23.3■■□□□ 1.32
LINC00943-205ENST00000539315 G3BP1Q13283 466 aaKnown RBP eCLIP23.3■■□□□ 1.32
LINC00943-205ENST00000539315 HHIPL2Q6UWX4 724 aa23.3■■□□□ 1.32
LINC00943-205ENST00000539315 COPRSQ9NQ92 184 aa23.3■■□□□ 1.32
LINC00943-205ENST00000539315 SUGT1Q9Y2Z0 365 aa23.3■■□□□ 1.32
LINC00943-205ENST00000539315 RFX5P48382 616 aaPredicted RBP23.29■■□□□ 1.32
LINC00943-205ENST00000539315 ARHGEF6Q15052 776 aa23.29■■□□□ 1.32
LINC00943-205ENST00000539315 SLC9C1Q4G0N8 1177 aa23.29■■□□□ 1.32
LINC00943-205ENST00000539315 TMEM106CQ9BVX2 250 aa23.29■■□□□ 1.32
LINC00943-205ENST00000539315 RAB11FIP3O75154 756 aa23.28■■□□□ 1.32
LINC00943-205ENST00000539315 PPIL2Q13356 520 aa23.28■■□□□ 1.32
LINC00943-205ENST00000539315 SNAPC2Q13487 334 aa23.28■■□□□ 1.32
LINC00943-205ENST00000539315 PUM3Q15397 648 aaKnown RBP23.28■■□□□ 1.32
LINC00943-205ENST00000539315 ZCCHC17Q9NP64 241 aaKnown RBP23.28■■□□□ 1.32
LINC00943-205ENST00000539315 TMOD2Q9NZR1 351 aa23.28■■□□□ 1.32
LINC00943-205ENST00000539315 ZBTB47Q9UFB7 747 aaPredicted RBP23.28■■□□□ 1.32
LINC00943-205ENST00000539315 FBXO3Q9UK99 471 aa23.28■■□□□ 1.32
LINC00943-205ENST00000539315 NOP58Q9Y2X3 529 aaKnown RBP23.28■■□□□ 1.32
LINC00943-205ENST00000539315 TRIOBPQ9H2D6 2365 aa23.27■■□□□ 1.32
LINC00943-205ENST00000539315 IFIT1P09914 478 aaKnown RBP23.27■■□□□ 1.32
LINC00943-205ENST00000539315 INPP5BP32019 993 aa23.27■■□□□ 1.32
LINC00943-205ENST00000539315 LACTBP83111 547 aaPredicted RBP23.27■■□□□ 1.32
LINC00943-205ENST00000539315 OS9Q13438 667 aaPredicted RBP23.27■■□□□ 1.32
LINC00943-205ENST00000539315 MIGA2Q7L4E1 593 aa23.27■■□□□ 1.32
LINC00943-205ENST00000539315 NBPF11Q86T75 865 aa23.27■■□□□ 1.32
LINC00943-205ENST00000539315 SMC5Q8IY18 1101 aa23.27■■□□□ 1.32
LINC00943-205ENST00000539315 SH3TC2Q8TF17 1288 aa23.26■■□□□ 1.31
LINC00943-205ENST00000539315 PA2G4Q9UQ80 394 aaKnown RBP23.26■■□□□ 1.31
LINC00943-205ENST00000539315 MAST3O60307 1309 aa23.26■■□□□ 1.31
LINC00943-205ENST00000539315 RPAP1Q9BWH6 1393 aaPredicted RBP23.26■■□□□ 1.31
LINC00943-205ENST00000539315 AK9Q5TCS8 1911 aa23.25■■□□□ 1.31
LINC00943-205ENST00000539315 EYA2O00167 538 aa23.25■■□□□ 1.31
LINC00943-205ENST00000539315 CTGFP29279 349 aa23.25■■□□□ 1.31
LINC00943-205ENST00000539315 DCAF15Q66K64 600 aa23.25■■□□□ 1.31
LINC00943-205ENST00000539315 C17orf99Q6UX52 265 aa23.25■■□□□ 1.31
LINC00943-205ENST00000539315 ATG9AQ7Z3C6 839 aa23.25■■□□□ 1.31
LINC00943-205ENST00000539315 ERC1Q8IUD2 1116 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms