RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 RBM5P52756 815 aaKnown RBP eCLIP8.97□□□□□ -0.97
LMO3-220ENST00000539232 FKBP1AP62942 108 aaKnown RBP8.97□□□□□ -0.97
LMO3-220ENST00000539232 SLC4A8Q2Y0W8 1093 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 CAVIN4Q5BKX8 364 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 NBPF12Q5TAG4 269 aaPredicted RBP8.97□□□□□ -0.97
LMO3-220ENST00000539232 TBC1D9Q6ZT07 1266 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 VPS37DQ86XT2 251 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 MTMR14Q8NCE2 650 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 FAM122AQ96E09 287 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 ERO1AQ96HE7 468 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 DEFB129Q9H1M3 183 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 ZBTB40Q9NUA8 1239 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 ZNF70Q9UC06 446 aaPredicted RBP8.97□□□□□ -0.97
LMO3-220ENST00000539232 SSC5DA1L4H1 1573 aa8.96□□□□□ -0.97
LMO3-220ENST00000539232 TCP10L2B9ZVM9 353 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 FRAT2O75474 233 aaPredicted RBP8.96□□□□□ -0.98
LMO3-220ENST00000539232 SURF6O75683 361 aaKnown RBP8.96□□□□□ -0.98
LMO3-220ENST00000539232 HOXD11P31277 338 aaPredicted RBP8.96□□□□□ -0.98
LMO3-220ENST00000539232 RASA3Q14644 834 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 MVPQ14764 893 aaKnown RBP8.96□□□□□ -0.98
LMO3-220ENST00000539232 SPDYE2Q495Y8 402 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 NBPF11Q86T75 865 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 ZFPM1Q8IX07 1006 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 CLMNQ96JQ2 1002 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 TEPSINQ96N21 525 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 NEUROD6Q96NK8 337 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 DBNDD2Q9BQY9 259 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 TMEM39BQ9GZU3 492 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 VEZTQ9HBM0 779 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 SNRKQ9NRH2 765 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 MTMR10Q9NXD2 777 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 HMG20BQ9P0W2 317 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.96□□□□□ -0.98
LMO3-220ENST00000539232 FBXO3Q9UK99 471 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 EXOC6BQ9Y2D4 811 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 NR2E3Q9Y5X4 410 aa8.96□□□□□ -0.98
LMO3-220ENST00000539232 MKRN3Q13064 507 aaKnown RBP8.95□□□□□ -0.98
LMO3-220ENST00000539232 G3BP1Q13283 466 aaKnown RBP eCLIP8.95□□□□□ -0.98
LMO3-220ENST00000539232 EAF2Q96CJ1 260 aaPredicted RBP8.95□□□□□ -0.98
LMO3-220ENST00000539232 SERPINA10Q9UK55 444 aa8.95□□□□□ -0.98
LMO3-220ENST00000539232 NOP58Q9Y2X3 529 aaKnown RBP8.95□□□□□ -0.98
LMO3-220ENST00000539232 DAGLAQ9Y4D2 1042 aa8.95□□□□□ -0.98
LMO3-220ENST00000539232 NDUFB9Q9Y6M9 179 aa8.95□□□□□ -0.98
LMO3-220ENST00000539232 VCANP13611 3396 aa8.95□□□□□ -0.98
LMO3-220ENST00000539232 SPEF2Q9C093 1822 aa8.95□□□□□ -0.98
LMO3-220ENST00000539232 APBB1O00213 710 aa8.94□□□□□ -0.98
LMO3-220ENST00000539232 MCAMP43121 646 aa8.94□□□□□ -0.98
LMO3-220ENST00000539232 NFIAQ12857 509 aa8.94□□□□□ -0.98
LMO3-220ENST00000539232 TNNI3KQ59H18 835 aa8.94□□□□□ -0.98
LMO3-220ENST00000539232 LDLRAD1Q5T700 205 aa8.94□□□□□ -0.98
LMO3-220ENST00000539232 CDC42EP5Q6NZY7 148 aa8.94□□□□□ -0.98
LMO3-220ENST00000539232 CNKSR2Q8WXI2 1034 aa8.94□□□□□ -0.98
LMO3-220ENST00000539232 HTATIP2Q9BUP3 242 aa8.94□□□□□ -0.98
LMO3-220ENST00000539232 CCDC8Q9H0W5 538 aaPredicted RBP8.94□□□□□ -0.98
LMO3-220ENST00000539232 EFCC1Q9HA90 598 aa8.94□□□□□ -0.98
LMO3-220ENST00000539232 DBNLQ9UJU6 430 aaKnown RBP8.94□□□□□ -0.98
LMO3-220ENST00000539232 FPGT-TNNI3KV9GXZ4 949 aa8.94□□□□□ -0.98
LMO3-220ENST00000539232 ZNF646O15015 1829 aaPredicted RBP8.94□□□□□ -0.98
LMO3-220ENST00000539232 USP2O75604 605 aaPredicted RBP8.93□□□□□ -0.98
LMO3-220ENST00000539232 GJA5P36382 358 aa8.93□□□□□ -0.98
LMO3-220ENST00000539232 SLC9C1Q4G0N8 1177 aa8.93□□□□□ -0.98
LMO3-220ENST00000539232 ERICH6BQ5W0A0 696 aa8.93□□□□□ -0.98
LMO3-220ENST00000539232 Q7L0L9 218 aa8.93□□□□□ -0.98
LMO3-220ENST00000539232 APOBEC3FQ8IUX4 373 aaKnown RBP8.93□□□□□ -0.98
LMO3-220ENST00000539232 TEKT1Q969V4 418 aa8.93□□□□□ -0.98
LMO3-220ENST00000539232 ZDHHC15Q96MV8 337 aa8.93□□□□□ -0.98
LMO3-220ENST00000539232 IL1RAPL2Q9NP60 686 aa8.93□□□□□ -0.98
LMO3-220ENST00000539232 PIH1D3Q9NQM4 214 aaKnown RBP8.93□□□□□ -0.98
LMO3-220ENST00000539232 HDAC5Q9UQL6 1122 aa8.93□□□□□ -0.98
LMO3-220ENST00000539232 ARID4AP29374 1257 aaPredicted RBP8.92□□□□□ -0.98
LMO3-220ENST00000539232 MECOMQ03112 1051 aa8.92□□□□□ -0.98
LMO3-220ENST00000539232 OS9Q13438 667 aaPredicted RBP8.92□□□□□ -0.98
LMO3-220ENST00000539232 TTLL12Q14166 644 aaPredicted RBP8.92□□□□□ -0.98
LMO3-220ENST00000539232 HHIPL2Q6UWX4 724 aa8.92□□□□□ -0.98
LMO3-220ENST00000539232 SH3BP5LQ7L8J4 393 aa8.92□□□□□ -0.98
LMO3-220ENST00000539232 WDR66Q8TBY9 1149 aa8.92□□□□□ -0.98
LMO3-220ENST00000539232 CD99L2Q8TCZ2 262 aa8.92□□□□□ -0.98
LMO3-220ENST00000539232 TBC1D22AQ8WUA7 517 aa8.92□□□□□ -0.98
LMO3-220ENST00000539232 FAM198AQ9UFP1 575 aa8.92□□□□□ -0.98
LMO3-220ENST00000539232 ANGEL1Q9UNK9 670 aaKnown RBP8.92□□□□□ -0.98
LMO3-220ENST00000539232 SALL1Q9NSC2 1324 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 SMARCA5O60264 1052 aaPredicted RBP8.91□□□□□ -0.98
LMO3-220ENST00000539232 CYP2E1P05181 493 aaPredicted RBP8.91□□□□□ -0.98
LMO3-220ENST00000539232 LDHBP07195 334 aaKnown RBP8.91□□□□□ -0.98
LMO3-220ENST00000539232 INHBEP58166 350 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 HDLBPQ00341 1268 aaKnown RBP8.91□□□□□ -0.98
LMO3-220ENST00000539232 TCP10Q12799 353 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 ADGRA1Q86SQ6 560 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 SPATA5Q8NB90 893 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 MRIQ9BWK5 157 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 ANTXR1Q9H6X2 564 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 DDX4Q9NQI0 724 aaKnown RBP8.91□□□□□ -0.98
LMO3-220ENST00000539232 USP40Q9NVE5 1235 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 GNL3LQ9NVN8 582 aaKnown RBP8.91□□□□□ -0.98
LMO3-220ENST00000539232 ABCF2Q9UG63 623 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 RAPGEFL1Q9UHV5 662 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 DENND2AQ9ULE3 1009 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 AKAP2Q9Y2D5 859 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 PCDHB15Q9Y5E8 787 aa8.91□□□□□ -0.98
LMO3-220ENST00000539232 MYH3P11055 1940 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms