RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 MIGA2Q7L4E1 593 aa15.35■□□□□ 0.05
YBX3-207ENST00000539204 FAM83AQ86UY5 434 aa15.35■□□□□ 0.05
YBX3-207ENST00000539204 C7orf61Q8IZ16 206 aa15.35■□□□□ 0.05
YBX3-207ENST00000539204 TDHQ8IZJ6 230 aa15.35■□□□□ 0.05
YBX3-207ENST00000539204 CRISPLD2Q9H0B8 497 aa15.35■□□□□ 0.05
YBX3-207ENST00000539204 MYH16Q9H6N6 1097 aa15.35■□□□□ 0.05
YBX3-207ENST00000539204 TMOD2Q9NZR1 351 aa15.35■□□□□ 0.05
YBX3-207ENST00000539204 ZMYND8Q9ULU4 1186 aaPredicted RBP15.35■□□□□ 0.05
YBX3-207ENST00000539204 KCNH4Q9UQ05 1017 aa15.35■□□□□ 0.05
YBX3-207ENST00000539204 CYP2C8P10632 490 aa15.34■□□□□ 0.05
YBX3-207ENST00000539204 ELNP15502 786 aa15.34■□□□□ 0.05
YBX3-207ENST00000539204 INPP5BP32019 993 aa15.34■□□□□ 0.05
YBX3-207ENST00000539204 FKBP1CQ5VVH2 108 aa15.34■□□□□ 0.05
YBX3-207ENST00000539204 LDHAL6AQ6ZMR3 332 aa15.34■□□□□ 0.05
YBX3-207ENST00000539204 FAM84BQ96KN1 310 aaPredicted RBP15.34■□□□□ 0.05
YBX3-207ENST00000539204 PAK6Q9NQU5 681 aaPredicted RBP15.34■□□□□ 0.05
YBX3-207ENST00000539204 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
YBX3-207ENST00000539204 GYG1P46976 350 aa15.33■□□□□ 0.04
YBX3-207ENST00000539204 IRF5Q13568 498 aa15.33■□□□□ 0.04
YBX3-207ENST00000539204 MOGSQ13724 837 aa15.33■□□□□ 0.04
YBX3-207ENST00000539204 TEKT1Q969V4 418 aa15.33■□□□□ 0.04
YBX3-207ENST00000539204 MRIQ9BWK5 157 aa15.33■□□□□ 0.04
YBX3-207ENST00000539204 CNNM1Q9NRU3 951 aa15.33■□□□□ 0.04
YBX3-207ENST00000539204 SLC4A2P04920 1241 aa15.32■□□□□ 0.04
YBX3-207ENST00000539204 SYN1P17600 705 aa15.32■□□□□ 0.04
YBX3-207ENST00000539204 MAGEA10P43363 369 aaPredicted RBP15.32■□□□□ 0.04
YBX3-207ENST00000539204 FOXO4P98177 505 aa15.32■□□□□ 0.04
YBX3-207ENST00000539204 UBE4AQ14139 1066 aa15.32■□□□□ 0.04
YBX3-207ENST00000539204 CCDC57Q2TAC2 916 aa15.32■□□□□ 0.04
YBX3-207ENST00000539204 TAF7LQ5H9L4 462 aa15.32■□□□□ 0.04
YBX3-207ENST00000539204 TSPYL6Q8N831 410 aa15.32■□□□□ 0.04
YBX3-207ENST00000539204 ANKLE1Q8NAG6 615 aa15.32■□□□□ 0.04
YBX3-207ENST00000539204 UBE2OQ9C0C9 1292 aaKnown RBP15.32■□□□□ 0.04
YBX3-207ENST00000539204 NBPF3Q9H094 633 aa15.32■□□□□ 0.04
YBX3-207ENST00000539204 CXCL11O14625 94 aa15.31■□□□□ 0.04
YBX3-207ENST00000539204 TNPO2O14787 897 aaKnown RBP15.31■□□□□ 0.04
YBX3-207ENST00000539204 GRIK5Q16478 980 aa15.31■□□□□ 0.04
YBX3-207ENST00000539204 GPAT2Q6NUI2 795 aa15.31■□□□□ 0.04
YBX3-207ENST00000539204 G2E3Q7L622 706 aa15.31■□□□□ 0.04
YBX3-207ENST00000539204 VPS37DQ86XT2 251 aa15.31■□□□□ 0.04
YBX3-207ENST00000539204 LINS1Q8NG48 757 aa15.31■□□□□ 0.04
YBX3-207ENST00000539204 DIS3LQ8TF46 1054 aaKnown RBP15.31■□□□□ 0.04
YBX3-207ENST00000539204 TBC1D22AQ8WUA7 517 aa15.31■□□□□ 0.04
YBX3-207ENST00000539204 ZNF594Q96JF6 807 aaPredicted RBP15.31■□□□□ 0.04
YBX3-207ENST00000539204 ZDHHC15Q96MV8 337 aa15.31■□□□□ 0.04
YBX3-207ENST00000539204 ZNF112Q9UJU3 913 aa15.31■□□□□ 0.04
YBX3-207ENST00000539204 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
YBX3-207ENST00000539204 FRAT2O75474 233 aaPredicted RBP15.3■□□□□ 0.04
YBX3-207ENST00000539204 FASTKD5Q7L8L6 764 aaKnown RBP15.3■□□□□ 0.04
YBX3-207ENST00000539204 PRDM6Q9NQX0 595 aa15.3■□□□□ 0.04
YBX3-207ENST00000539204 RPTORQ8N122 1335 aa15.29■□□□□ 0.04
YBX3-207ENST00000539204 CHAF1AQ13111 956 aaPredicted RBP15.29■□□□□ 0.04
YBX3-207ENST00000539204 APOBEC3HQ6NTF7 200 aaKnown RBP15.29■□□□□ 0.04
YBX3-207ENST00000539204 LMBR1LQ6UX01 489 aa15.29■□□□□ 0.04
YBX3-207ENST00000539204 DNAAF4Q8WXU2 420 aa15.29■□□□□ 0.04
YBX3-207ENST00000539204 COA7Q96BR5 231 aa15.29■□□□□ 0.04
YBX3-207ENST00000539204 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.29■□□□□ 0.04
YBX3-207ENST00000539204 SPTBN5Q9NRC6 3674 aaKnown RBP15.29■□□□□ 0.04
YBX3-207ENST00000539204 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
YBX3-207ENST00000539204 FAM151AQ8WW52 585 aa15.28■□□□□ 0.04
YBX3-207ENST00000539204 C11orf49Q9H6J7 331 aa15.28■□□□□ 0.04
YBX3-207ENST00000539204 IQSEC3Q9UPP2 1182 aaPredicted RBP15.28■□□□□ 0.04
YBX3-207ENST00000539204 POTEB2H3BUK9 544 aa15.27■□□□□ 0.04
YBX3-207ENST00000539204 APAF1O14727 1248 aa15.27■□□□□ 0.04
YBX3-207ENST00000539204 FLIIQ13045 1269 aa15.27■□□□□ 0.04
YBX3-207ENST00000539204 FKBP5Q13451 457 aaPredicted RBP15.27■□□□□ 0.04
YBX3-207ENST00000539204 NOL9Q5SY16 702 aaKnown RBP15.27■□□□□ 0.04
YBX3-207ENST00000539204 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.04
YBX3-207ENST00000539204 FBXO33Q7Z6M2 555 aa15.27■□□□□ 0.04
YBX3-207ENST00000539204 SMCR8Q8TEV9 937 aaPredicted RBP15.27■□□□□ 0.04
YBX3-207ENST00000539204 ZHX2Q9Y6X8 837 aa15.27■□□□□ 0.04
YBX3-207ENST00000539204 CAVIN4Q5BKX8 364 aa15.26■□□□□ 0.03
YBX3-207ENST00000539204 HHIPL2Q6UWX4 724 aa15.26■□□□□ 0.03
YBX3-207ENST00000539204 GUCD1Q96NT3 240 aa15.26■□□□□ 0.03
YBX3-207ENST00000539204 HMX1Q9NP08 348 aaPredicted RBP15.26■□□□□ 0.03
YBX3-207ENST00000539204 SLC45A1Q9Y2W3 748 aa15.26■□□□□ 0.03
YBX3-207ENST00000539204 RPAP1Q9BWH6 1393 aaPredicted RBP15.25■□□□□ 0.03
YBX3-207ENST00000539204 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
YBX3-207ENST00000539204 A0A0G2JLL6 359 aaPredicted RBP15.25■□□□□ 0.03
YBX3-207ENST00000539204 TCP10Q12799 353 aa15.25■□□□□ 0.03
YBX3-207ENST00000539204 GADL1Q6ZQY3 521 aa15.25■□□□□ 0.03
YBX3-207ENST00000539204 PRRT2Q7Z6L0 340 aaPredicted RBP15.25■□□□□ 0.03
YBX3-207ENST00000539204 SUGT1Q9Y2Z0 365 aa15.25■□□□□ 0.03
YBX3-207ENST00000539204 MAST3O60307 1309 aa15.24■□□□□ 0.03
YBX3-207ENST00000539204 HMGCRP04035 888 aa15.24■□□□□ 0.03
YBX3-207ENST00000539204 TWISTNBQ3B726 338 aaPredicted RBP15.24■□□□□ 0.03
YBX3-207ENST00000539204 EPHA10Q5JZY3 1008 aa15.24■□□□□ 0.03
YBX3-207ENST00000539204 FAM161BQ96MY7 647 aa15.24■□□□□ 0.03
YBX3-207ENST00000539204 PICK1Q9NRD5 415 aa15.24■□□□□ 0.03
YBX3-207ENST00000539204 MGAMO43451 1857 aa15.24■□□□□ 0.03
YBX3-207ENST00000539204 ANKRD13CQ8N6S4 541 aa15.23■□□□□ 0.03
YBX3-207ENST00000539204 PUS3Q9BZE2 481 aaKnown RBP15.23■□□□□ 0.03
YBX3-207ENST00000539204 OGDHLQ9ULD0 1010 aa15.23■□□□□ 0.03
YBX3-207ENST00000539204 AFG3L2Q9Y4W6 797 aa15.23■□□□□ 0.03
YBX3-207ENST00000539204 ALPK3Q96L96 1907 aa15.23■□□□□ 0.03
YBX3-207ENST00000539204 MROH5Q6ZUA9 1318 aa15.22■□□□□ 0.03
YBX3-207ENST00000539204 TSR2Q969E8 191 aaKnown RBP15.22■□□□□ 0.03
YBX3-207ENST00000539204 PTPRAP18433 802 aa15.21■□□□□ 0.03
YBX3-207ENST00000539204 MDM2Q00987 491 aaPredicted RBP15.21■□□□□ 0.03
YBX3-207ENST00000539204 SYMPKQ92797 1274 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms