RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 GAKO14976 1311 aa12.25□□□□□ -0.45
CLPB-210ENST00000539148 ZNF541Q9H0D2 1346 aa12.25□□□□□ -0.45
CLPB-210ENST00000539148 DDNO94850 711 aaPredicted RBP12.24□□□□□ -0.45
CLPB-210ENST00000539148 MCCP23508 829 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 BTDP43251 543 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 SCNN1DP51172 638 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 NMIQ13287 307 aaPredicted RBP12.24□□□□□ -0.45
CLPB-210ENST00000539148 CFAP100Q494V2 611 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 FOCADQ5VW36 1801 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 CCDC171Q6TFL3 1326 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 SKAP1Q86WV1 359 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 MICALL2Q8IY33 904 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 WDR90Q96KV7 1748 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 ESYT1Q9BSJ8 1104 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 ATP8A2Q9NTI2 1148 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
CLPB-210ENST00000539148 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
CLPB-210ENST00000539148 TCRBV5S4A2TA0A5A2 114 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 SGSM2O43147 1006 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 APPP05067 770 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 USP5P45974 858 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 KIF4BQ2VIQ3 1234 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 FKBP1CQ5VVH2 108 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 GIMAP6Q6P9H5 292 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 USP50Q70EL3 339 aaPredicted RBP12.23□□□□□ -0.45
CLPB-210ENST00000539148 HOOK2Q96ED9 719 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 ANP32EQ9BTT0 268 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 AATFQ9NY61 560 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLPB-210ENST00000539148 DAGLAQ9Y4D2 1042 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 MYH1P12882 1939 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 CDK5RAP2Q96SN8 1893 aa12.23□□□□□ -0.45
CLPB-210ENST00000539148 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 GPAA1O43292 621 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
CLPB-210ENST00000539148 MBD4O95243 580 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
CLPB-210ENST00000539148 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 VEGFAP15692 232 aaPredicted RBP12.22□□□□□ -0.45
CLPB-210ENST00000539148 BECN1Q14457 450 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 DIXDC1Q155Q3 683 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 RNF20Q5VTR2 975 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 TEX11Q8IYF3 940 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 ZC3H15Q8WU90 426 aaKnown RBP12.22□□□□□ -0.45
CLPB-210ENST00000539148 DSCC1Q9BVC3 393 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 MXD3Q9BW11 206 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 USP40Q9NVE5 1235 aa12.22□□□□□ -0.45
CLPB-210ENST00000539148 A0A0D9SFI3 127 aa12.21□□□□□ -0.45
CLPB-210ENST00000539148 PATL2C9JE40 543 aaKnown RBP12.21□□□□□ -0.45
CLPB-210ENST00000539148 NT5C2P49902 561 aa12.21□□□□□ -0.45
CLPB-210ENST00000539148 APOBEC3FQ8IUX4 373 aaKnown RBP12.21□□□□□ -0.45
CLPB-210ENST00000539148 MIGA1Q8NAN2 632 aa12.21□□□□□ -0.45
CLPB-210ENST00000539148 IL27Q8NEV9 243 aa12.21□□□□□ -0.45
CLPB-210ENST00000539148 OSBP2Q969R2 916 aa12.21□□□□□ -0.45
CLPB-210ENST00000539148 FAM227BQ96M60 508 aa12.21□□□□□ -0.45
CLPB-210ENST00000539148 STRBPQ96SI9 672 aaKnown RBP12.21□□□□□ -0.45
CLPB-210ENST00000539148 PUS7LQ9H0K6 701 aaKnown RBP12.21□□□□□ -0.45
CLPB-210ENST00000539148 DHX36Q9H2U1 1008 aaKnown RBP12.21□□□□□ -0.45
CLPB-210ENST00000539148 ZNF287Q9HBT7 754 aa12.21□□□□□ -0.45
CLPB-210ENST00000539148 ANO2Q9NQ90 1003 aa12.21□□□□□ -0.45
CLPB-210ENST00000539148 SLC4A4Q9Y6R1 1079 aa12.21□□□□□ -0.45
CLPB-210ENST00000539148 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
CLPB-210ENST00000539148 NAV1Q8NEY1 1877 aa12.21□□□□□ -0.46
CLPB-210ENST00000539148 ZMYM6O95789 1325 aa12.2□□□□□ -0.46
CLPB-210ENST00000539148 PITPNM2Q9BZ72 1349 aa12.2□□□□□ -0.46
CLPB-210ENST00000539148 ENTPD3O75355 529 aa12.2□□□□□ -0.46
CLPB-210ENST00000539148 HLA-DOAP06340 250 aa12.2□□□□□ -0.46
CLPB-210ENST00000539148 EPHX2P34913 555 aa12.2□□□□□ -0.46
CLPB-210ENST00000539148 TDO2P48775 406 aa12.2□□□□□ -0.46
CLPB-210ENST00000539148 RBM26Q5T8P6 1007 aaKnown RBP12.2□□□□□ -0.46
CLPB-210ENST00000539148 TTC6Q86TZ1 520 aa12.2□□□□□ -0.46
CLPB-210ENST00000539148 DCPSQ96C86 337 aaKnown RBP12.2□□□□□ -0.46
CLPB-210ENST00000539148 RIOK1Q9BRS2 568 aaKnown RBP12.2□□□□□ -0.46
CLPB-210ENST00000539148 NAPBQ9H115 298 aa12.2□□□□□ -0.46
CLPB-210ENST00000539148 ARMT1Q9H993 441 aa12.2□□□□□ -0.46
CLPB-210ENST00000539148 PPP2R3BQ9Y5P8 575 aa12.2□□□□□ -0.46
CLPB-210ENST00000539148 MYH8P13535 1937 aa12.19□□□□□ -0.46
CLPB-210ENST00000539148 BAZ2AQ9UIF9 1905 aaKnown RBP12.19□□□□□ -0.46
CLPB-210ENST00000539148 WNT10BO00744 389 aa12.19□□□□□ -0.46
CLPB-210ENST00000539148 ZKSCAN1P17029 563 aaPredicted RBP12.19□□□□□ -0.46
CLPB-210ENST00000539148 ALX1Q15699 326 aa12.19□□□□□ -0.46
CLPB-210ENST00000539148 GRIK5Q16478 980 aa12.19□□□□□ -0.46
CLPB-210ENST00000539148 IMMTQ16891 758 aaKnown RBP12.19□□□□□ -0.46
CLPB-210ENST00000539148 APOBEC3HQ6NTF7 200 aaKnown RBP12.19□□□□□ -0.46
CLPB-210ENST00000539148 CDC42EP5Q6NZY7 148 aa12.19□□□□□ -0.46
CLPB-210ENST00000539148 FAM83AQ86UY5 434 aa12.19□□□□□ -0.46
CLPB-210ENST00000539148 IDI2Q9BXS1 227 aa12.19□□□□□ -0.46
CLPB-210ENST00000539148 TRIM34Q9BYJ4 488 aa12.19□□□□□ -0.46
CLPB-210ENST00000539148 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
CLPB-210ENST00000539148 LAMB1P07942 1786 aa12.18□□□□□ -0.46
CLPB-210ENST00000539148 POLR2AP24928 1970 aaKnown RBP12.18□□□□□ -0.46
CLPB-210ENST00000539148 M0R2C6 588 aa12.18□□□□□ -0.46
CLPB-210ENST00000539148 PCP11498 1178 aaKnown RBP12.18□□□□□ -0.46
CLPB-210ENST00000539148 EPS15P42566 896 aa12.18□□□□□ -0.46
CLPB-210ENST00000539148 SPDYE2Q495Y8 402 aa12.18□□□□□ -0.46
CLPB-210ENST00000539148 TBC1D10BQ4KMP7 808 aaPredicted RBP12.18□□□□□ -0.46
CLPB-210ENST00000539148 SULF1Q8IWU6 871 aa12.18□□□□□ -0.46
CLPB-210ENST00000539148 LCORLQ8N3X6 602 aa12.18□□□□□ -0.46
CLPB-210ENST00000539148 SH3RF3Q8TEJ3 882 aaPredicted RBP12.18□□□□□ -0.46
CLPB-210ENST00000539148 ZNF384Q8TF68 577 aa12.18□□□□□ -0.46
CLPB-210ENST00000539148 PRMT6Q96LA8 375 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms