RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 TBX22Q9Y458 520 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 E2F8A0AVK6 867 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 FAM187AA6NFU0 413 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 B2RBV5 119 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 DLL1O00548 723 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 TNFRSF10CO14798 259 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 NFKB1P19838 968 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 PCBP4P57723 403 aaKnown RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 PIP4K2BP78356 416 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 RASGRF1Q13972 1273 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 ZYXQ15942 572 aaKnown RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 TTC39BQ5VTQ0 682 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 MRM1Q6IN84 353 aaKnown RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 ZNF746Q6NUN9 644 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 RSPO2Q6UXX9 243 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 CCNJLQ8IV13 435 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 TMEM130Q8N3G9 435 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 CEP120Q8N960 986 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 KLHL23Q8NBE8 558 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 TTC16Q8NEE8 873 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 GAL3ST3Q96A11 431 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 TRIM47Q96LD4 638 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 TM9SF2Q99805 663 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 ZFYVE21Q9BQ24 234 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 SUGCTQ9HAC7 445 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 PCDH18Q9HCL0 1135 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 DZANK1Q9NVP4 752 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 ABI2Q9NYB9 513 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 GMPR2Q9P2T1 348 aaKnown RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 IQCA1LA6NCM1 817 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 CCDC85CA6NKD9 419 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 IGF2BP3O00425 579 aaKnown RBP eCLIP1.59□□□□□ -2.16
HIF1A-204ENST00000539097 FCGRTP55899 365 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 BMS1Q14692 1282 aaKnown RBP1.59□□□□□ -2.16
HIF1A-204ENST00000539097 KIF4BQ2VIQ3 1234 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 BICDL1Q6ZP65 573 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 SLCO4C1Q6ZQN7 724 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 PMFBP1Q8TBY8 1022 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 ZNF837Q96EG3 531 aaPredicted RBP1.59□□□□□ -2.16
HIF1A-204ENST00000539097 CEP63Q96MT8 703 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 TMEM74Q96NL1 305 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 POP1Q99575 1024 aaKnown RBP1.59□□□□□ -2.16
HIF1A-204ENST00000539097 NRSN2Q9GZP1 204 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 RASSF4Q9H2L5 321 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 MBIPQ9NS73 344 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 GINM1Q9NU53 330 aa1.59□□□□□ -2.16
HIF1A-204ENST00000539097 CDC25BP30305 580 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 GIPRP48546 466 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 ARL4DP49703 201 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 SEPT6Q14141 434 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 MLECQ14165 292 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 ZNF423Q2M1K9 1284 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 TKFCQ3LXA3 575 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 CYP4F22Q6NT55 531 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 SV2AQ7L0J3 742 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 VN1R5Q7Z5H4 357 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 UBE3DQ7Z6J8 389 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 HNRNPLLQ8WVV9 542 aaKnown RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 FMNL2Q96PY5 1086 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 NACC1Q96RE7 527 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 TIMMDC1Q9NPL8 285 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 INTS7Q9NVH2 962 aaKnown RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 ERBB4Q15303 1308 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 RNF225M0QZC1 329 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 ATXN7O15265 892 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 B3GALT4O96024 378 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 F13A1P00488 732 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 HSP90B1P14625 803 aaKnown RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 EPHA1P21709 976 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 ARID5AQ03989 594 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 RASA3Q14644 834 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 FNDC3BQ53EP0 1204 aaKnown RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 ZNF468Q5VIY5 522 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 CDCP2Q5VXM1 449 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 SMG8Q8ND04 991 aaKnown RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 PHC3Q8NDX5 983 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 GTPBP3Q969Y2 492 aaKnown RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 ATP13A2Q9NQ11 1180 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 HSPBP1Q9NZL4 362 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 TRIM33Q9UPN9 1127 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 CORINQ9Y5Q5 1042 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 TERTO14746 1132 aaKnown RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 GRIN3BO60391 1043 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 ADAM23O75077 832 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 ARNTP27540 789 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 ZNF165P49910 485 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 RNF4P78317 190 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 BBS9Q3SYG4 887 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 RAVER1Q8IY67 606 aaKnown RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 PANK1Q8TE04 598 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 STAG1Q8WVM7 1258 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 SHDQ96IW2 340 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 MRPL4Q9BYD3 311 aaKnown RBP1.58□□□□□ -2.16
HIF1A-204ENST00000539097 MRS2Q9HD23 443 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 MARK1Q9P0L2 795 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 PRKAG3Q9UGI9 489 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 SOX13Q9UN79 622 aa1.58□□□□□ -2.16
HIF1A-204ENST00000539097 SBNO2Q9Y2G9 1366 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms