RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 GALNT12Q8IXK2 581 aa10.79□□□□□ -0.68
TUBD1-206ENST00000539018 MICALL1Q8N3F8 863 aa10.79□□□□□ -0.68
TUBD1-206ENST00000539018 CEP120Q8N960 986 aa10.79□□□□□ -0.68
TUBD1-206ENST00000539018 NUDT8Q8WV74 236 aa10.79□□□□□ -0.68
TUBD1-206ENST00000539018 SMG9Q9H0W8 520 aaKnown RBP10.79□□□□□ -0.68
TUBD1-206ENST00000539018 SCAF11Q99590 1463 aaKnown RBP10.79□□□□□ -0.68
TUBD1-206ENST00000539018 COL17A1Q9UMD9 1497 aaPredicted RBP10.79□□□□□ -0.68
TUBD1-206ENST00000539018 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
TUBD1-206ENST00000539018 M0R082 166 aa10.78□□□□□ -0.68
TUBD1-206ENST00000539018 RGS9O75916 674 aaPredicted RBP10.78□□□□□ -0.68
TUBD1-206ENST00000539018 C20orf204Q6ZNR8 217 aa10.78□□□□□ -0.68
TUBD1-206ENST00000539018 ZNF417Q8TAU3 575 aa10.78□□□□□ -0.68
TUBD1-206ENST00000539018 PLD4Q96BZ4 506 aa10.78□□□□□ -0.68
TUBD1-206ENST00000539018 ZNF587Q96SQ5 575 aaPredicted RBP10.78□□□□□ -0.68
TUBD1-206ENST00000539018 JPH1Q9HDC5 661 aaPredicted RBP10.78□□□□□ -0.68
TUBD1-206ENST00000539018 CCDC9Q9Y3X0 531 aaKnown RBP10.78□□□□□ -0.68
TUBD1-206ENST00000539018 ERVK-7P63135 1459 aa10.78□□□□□ -0.68
TUBD1-206ENST00000539018 KDM5AP29375 1690 aaKnown RBP10.78□□□□□ -0.68
TUBD1-206ENST00000539018 KIF7Q2M1P5 1343 aa10.78□□□□□ -0.68
TUBD1-206ENST00000539018 SPATA31D1Q6ZQQ2 1576 aa10.77□□□□□ -0.68
TUBD1-206ENST00000539018 MYO5BQ9ULV0 1848 aa10.77□□□□□ -0.68
TUBD1-206ENST00000539018 ATP2B2Q01814 1243 aa10.77□□□□□ -0.69
TUBD1-206ENST00000539018 EAPPQ56P03 285 aaPredicted RBP10.77□□□□□ -0.69
TUBD1-206ENST00000539018 CCDC74AQ96AQ1 378 aa10.77□□□□□ -0.69
TUBD1-206ENST00000539018 SLC52A1Q9NWF4 448 aa10.77□□□□□ -0.69
TUBD1-206ENST00000539018 PODXL2Q9NZ53 605 aa10.77□□□□□ -0.69
TUBD1-206ENST00000539018 NEXMIFQ5QGS0 1516 aa10.76□□□□□ -0.69
TUBD1-206ENST00000539018 LILRB5O75023 590 aa10.76□□□□□ -0.69
TUBD1-206ENST00000539018 ATP11AP98196 1134 aa10.76□□□□□ -0.69
TUBD1-206ENST00000539018 RASSF4Q9H2L5 321 aa10.76□□□□□ -0.69
TUBD1-206ENST00000539018 NPHS2Q9NP85 383 aa10.76□□□□□ -0.69
TUBD1-206ENST00000539018 STK17AQ9UEE5 414 aa10.76□□□□□ -0.69
TUBD1-206ENST00000539018 TMEM131LA2VDJ0 1609 aa10.76□□□□□ -0.69
TUBD1-206ENST00000539018 KTN1Q86UP2 1357 aaKnown RBP10.76□□□□□ -0.69
TUBD1-206ENST00000539018 SMNDC1O75940 238 aaKnown RBP eCLIP10.75□□□□□ -0.69
TUBD1-206ENST00000539018 ACPPP15309 386 aa10.75□□□□□ -0.69
TUBD1-206ENST00000539018 DGKGP49619 791 aa10.75□□□□□ -0.69
TUBD1-206ENST00000539018 TTC9Q92623 222 aa10.75□□□□□ -0.69
TUBD1-206ENST00000539018 OSMRQ99650 979 aa10.75□□□□□ -0.69
TUBD1-206ENST00000539018 PBX4Q9BYU1 374 aa10.75□□□□□ -0.69
TUBD1-206ENST00000539018 LATS2Q9NRM7 1088 aa10.75□□□□□ -0.69
TUBD1-206ENST00000539018 DZANK1Q9NVP4 752 aa10.75□□□□□ -0.69
TUBD1-206ENST00000539018 ADAMTS8Q9UP79 889 aa10.75□□□□□ -0.69
TUBD1-206ENST00000539018 ZFYVE9O95405 1425 aa10.75□□□□□ -0.69
TUBD1-206ENST00000539018 LDHBP07195 334 aaKnown RBP10.74□□□□□ -0.69
TUBD1-206ENST00000539018 PEAR1Q5VY43 1037 aaPredicted RBP10.74□□□□□ -0.69
TUBD1-206ENST00000539018 CEP135Q66GS9 1140 aa10.74□□□□□ -0.69
TUBD1-206ENST00000539018 ALG1LQ6GMV1 187 aa10.74□□□□□ -0.69
TUBD1-206ENST00000539018 C8orf86Q6ZUL3 223 aa10.74□□□□□ -0.69
TUBD1-206ENST00000539018 PRDM6Q9NQX0 595 aa10.74□□□□□ -0.69
TUBD1-206ENST00000539018 PIK3C2GO75747 1445 aa10.74□□□□□ -0.69
TUBD1-206ENST00000539018 HOXB4P17483 251 aaPredicted RBP10.73□□□□□ -0.69
TUBD1-206ENST00000539018 SNRPNP63162 240 aaKnown RBP10.73□□□□□ -0.69
TUBD1-206ENST00000539018 TMF1P82094 1093 aa10.73□□□□□ -0.69
TUBD1-206ENST00000539018 FBF1Q8TES7 1133 aa10.73□□□□□ -0.69
TUBD1-206ENST00000539018 ZKSCAN3Q9BRR0 538 aa10.73□□□□□ -0.69
TUBD1-206ENST00000539018 WWC3Q9ULE0 1092 aa10.73□□□□□ -0.69
TUBD1-206ENST00000539018 FER1L4A9Z1Z3 1794 aa10.72□□□□□ -0.69
TUBD1-206ENST00000539018 ST20-MTHFSA0A0A6YYL1 179 aa10.72□□□□□ -0.69
TUBD1-206ENST00000539018 A0A1W2PP55 124 aa10.72□□□□□ -0.69
TUBD1-206ENST00000539018 AFF1P51825 1210 aaKnown RBP10.72□□□□□ -0.69
TUBD1-206ENST00000539018 FGD1P98174 961 aa10.72□□□□□ -0.69
TUBD1-206ENST00000539018 PODNQ7Z5L7 613 aa10.72□□□□□ -0.69
TUBD1-206ENST00000539018 SETDB2Q96T68 719 aa10.72□□□□□ -0.69
TUBD1-206ENST00000539018 NLRP2Q9NX02 1062 aa10.72□□□□□ -0.69
TUBD1-206ENST00000539018 MKL2Q9ULH7 1088 aa10.72□□□□□ -0.69
TUBD1-206ENST00000539018 LMTK3Q96Q04 1460 aa10.72□□□□□ -0.69
TUBD1-206ENST00000539018 QRICH2Q9H0J4 1663 aa10.72□□□□□ -0.69
TUBD1-206ENST00000539018 NFKBIEO00221 500 aa10.71□□□□□ -0.69
TUBD1-206ENST00000539018 GADD45BO75293 160 aaPredicted RBP10.71□□□□□ -0.69
TUBD1-206ENST00000539018 TRPA1O75762 1119 aa10.71□□□□□ -0.69
TUBD1-206ENST00000539018 IRS1P35568 1242 aa10.71□□□□□ -0.69
TUBD1-206ENST00000539018 KIAA0319Q5VV43 1072 aa10.71□□□□□ -0.69
TUBD1-206ENST00000539018 TMEM102Q8N9M5 508 aaPredicted RBP10.71□□□□□ -0.69
TUBD1-206ENST00000539018 EPS8L3Q8TE67 593 aaKnown RBP10.71□□□□□ -0.69
TUBD1-206ENST00000539018 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.69
TUBD1-206ENST00000539018 TRIM33Q9UPN9 1127 aa10.71□□□□□ -0.69
TUBD1-206ENST00000539018 SBNO2Q9Y2G9 1366 aa10.71□□□□□ -0.69
TUBD1-206ENST00000539018 PDE2AO00408 941 aaPredicted RBP10.7□□□□□ -0.7
TUBD1-206ENST00000539018 PRPF40AO75400 957 aaKnown RBP10.7□□□□□ -0.7
TUBD1-206ENST00000539018 GRIK5Q16478 980 aa10.7□□□□□ -0.7
TUBD1-206ENST00000539018 GDF6Q6KF10 455 aaPredicted RBP10.7□□□□□ -0.7
TUBD1-206ENST00000539018 HHIPQ96QV1 700 aa10.7□□□□□ -0.7
TUBD1-206ENST00000539018 EHD4Q9H223 541 aa10.7□□□□□ -0.7
TUBD1-206ENST00000539018 ARHGEF28Q8N1W1 1705 aaKnown RBP10.7□□□□□ -0.7
TUBD1-206ENST00000539018 PIK3R2O00459 728 aa10.69□□□□□ -0.7
TUBD1-206ENST00000539018 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.69□□□□□ -0.7
TUBD1-206ENST00000539018 ERICH6BQ5W0A0 696 aa10.69□□□□□ -0.7
TUBD1-206ENST00000539018 LINC00114Q6XXX2 140 aa10.69□□□□□ -0.7
TUBD1-206ENST00000539018 FBXO33Q7Z6M2 555 aa10.69□□□□□ -0.7
TUBD1-206ENST00000539018 BEND7Q8N7W2 519 aaPredicted RBP10.69□□□□□ -0.7
TUBD1-206ENST00000539018 POP1Q99575 1024 aaKnown RBP10.69□□□□□ -0.7
TUBD1-206ENST00000539018 BCL2L13Q9BXK5 485 aa10.69□□□□□ -0.7
TUBD1-206ENST00000539018 LIN7BQ9HAP6 207 aa10.69□□□□□ -0.7
TUBD1-206ENST00000539018 NID1P14543 1247 aa10.68□□□□□ -0.7
TUBD1-206ENST00000539018 PTPRAP18433 802 aa10.68□□□□□ -0.7
TUBD1-206ENST00000539018 PI16Q6UXB8 463 aa10.68□□□□□ -0.7
TUBD1-206ENST00000539018 CACTIN-AS1Q8N1I8 211 aa10.68□□□□□ -0.7
TUBD1-206ENST00000539018 NXPE3Q969Y0 559 aa10.68□□□□□ -0.7
TUBD1-206ENST00000539018 SCARF2Q96GP6 870 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms