RNA–Protein interactions for RNA: ENST00000538621.2

PACSIN1-206, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,286 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-206ENST00000538621 DRC1Q96MC2 740 aa12.52□□□□□ -0.41
PACSIN1-206ENST00000538621 VGLL3A8MV65 326 aa12.52□□□□□ -0.41
PACSIN1-206ENST00000538621 POLR2DO15514 142 aaKnown RBP12.52□□□□□ -0.41
PACSIN1-206ENST00000538621 EIF3JO75822 258 aaKnown RBP12.52□□□□□ -0.41
PACSIN1-206ENST00000538621 FGAP02671 866 aa12.52□□□□□ -0.41
PACSIN1-206ENST00000538621 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
PACSIN1-206ENST00000538621 RICTORQ6R327 1708 aa12.52□□□□□ -0.41
PACSIN1-206ENST00000538621 DLC1Q96QB1 1528 aa12.52□□□□□ -0.41
PACSIN1-206ENST00000538621 MYL5Q02045 173 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 CACNA2D4Q7Z3S7 1137 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 GPIHBP1Q8IV16 184 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 MYRIPQ8NFW9 859 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 CRNKL1Q9BZJ0 848 aaKnown RBP12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 MCM9Q9NXL9 1143 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 ARHGEF28Q8N1W1 1705 aaKnown RBP12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 MCM6Q14566 821 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 CCDC178Q5BJE1 867 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 HAUS7Q99871 368 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 LLPHQ9BRT6 129 aaKnown RBP12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 IQSEC2Q5JU85 1478 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 CDC42BPGQ6DT37 1551 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 OVOS2A0A0J9YW53 1432 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 OVOS2Q6IE36 1432 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 H0YHG0 523 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 ZNF500O60304 480 aaPredicted RBP12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 YEATS4O95619 227 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 CCT6AP40227 531 aaKnown RBP12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 POLA2Q14181 598 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 SPA17Q15506 151 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 FAM98CQ17RN3 349 aaKnown RBP12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 CRACR2BQ8N4Y2 399 aaPredicted RBP12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 IL25Q9H293 177 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 TCP11L1Q9NUJ3 509 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 SPATA31D1Q6ZQQ2 1576 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 KIF5BP33176 963 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 CCDC148Q8NFR7 591 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 COPRSQ9NQ92 184 aa12.51□□□□□ -0.41
PACSIN1-206ENST00000538621 CHGBP05060 677 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 TRIM21P19474 475 aaKnown RBP12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 ZNF76P36508 570 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 MYSM1Q5VVJ2 828 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 CWC15Q9P013 229 aaKnown RBP12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 PPP1R1BQ9UD71 204 aaPredicted RBP12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 PUF60Q9UHX1 559 aaKnown RBP12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 USP31Q70CQ4 1352 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 STAT6P42226 847 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 PTPN12Q05209 780 aaKnown RBP12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 ZNF827Q17R98 1081 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 RPGRQ92834 1020 aaKnown RBP12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 XPO4Q9C0E2 1151 aaKnown RBP12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 GJB4Q9NTQ9 266 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 V9GY48 417 aaPredicted RBP12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 SH3TC1Q8TE82 1336 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 IGKV5-2P06315 115 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 TSPY3P0CV98 308 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 TSPY8P0CW00 308 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 FANCCQ00597 558 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 FKBP15Q5T1M5 1219 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 KANK3Q6NY19 840 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 TMTC2Q8N394 836 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 CRACR2AQ9BSW2 395 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 MYO5BQ9ULV0 1848 aa12.5□□□□□ -0.41
PACSIN1-206ENST00000538621 NECTIN1Q15223 517 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 KRT222Q8N1A0 295 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 ELP1O95163 1332 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 PNOCQ13519 176 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 ELF2Q15723 593 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 ZNF397Q8NF99 534 aaPredicted RBP12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 NLRP3Q96P20 1036 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 MRVI1Q9Y6F6 885 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 ERCC3P19447 782 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 KCNQ4P56696 695 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 SPTY2D1Q68D10 685 aaPredicted RBP12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 PCDHA7Q9UN72 937 aa12.49□□□□□ -0.41
PACSIN1-206ENST00000538621 PDIA3P30101 505 aaKnown RBP12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 PUM3Q15397 648 aaKnown RBP12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 CLIC6Q96NY7 704 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 ZNF287Q9HBT7 754 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 JADE2Q9NQC1 790 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 CLIC4Q9Y696 253 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 PICALMQ13492 652 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 SETDB2Q96T68 719 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 NDUFA8P51970 172 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 BMS1Q14692 1282 aaKnown RBP12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 CNPY4Q8N129 248 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 GREM2Q9H772 168 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 TFCP2L1Q9NZI6 479 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 SIGLEC1Q9BZZ2 1709 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 MYO1BO43795 1136 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 PFKFB2O60825 505 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 PFKFB1P16118 471 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 FAM182BQ5T319 152 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 NFE2L3Q9Y4A8 694 aa12.48□□□□□ -0.41
PACSIN1-206ENST00000538621 WDR17Q8IZU2 1322 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms