RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 FAM208AQ9UK61 1670 aaKnown RBP7.06□□□□□ -1.28
NPIPB3-208ENST00000537983 NPHP3Q7Z494 1330 aa7.06□□□□□ -1.28
NPIPB3-208ENST00000537983 ATXN7O15265 892 aaPredicted RBP7.06□□□□□ -1.28
NPIPB3-208ENST00000537983 ARSDP51689 593 aa7.06□□□□□ -1.28
NPIPB3-208ENST00000537983 HSP90AB2PQ58FF8 381 aa7.06□□□□□ -1.28
NPIPB3-208ENST00000537983 ZNF787Q6DD87 383 aa7.06□□□□□ -1.28
NPIPB3-208ENST00000537983 CEP63Q96MT8 703 aa7.06□□□□□ -1.28
NPIPB3-208ENST00000537983 ORAI2Q96SN7 254 aa7.06□□□□□ -1.28
NPIPB3-208ENST00000537983 CCDC87Q9NVE4 849 aa7.06□□□□□ -1.28
NPIPB3-208ENST00000537983 NXF1Q9UBU9 619 aaKnown RBP7.06□□□□□ -1.28
NPIPB3-208ENST00000537983 H3BM21 787 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 BNIP3LO60238 219 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 MZF1P28698 734 aaPredicted RBP7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 KCNQ4P56696 695 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 SULT6B1Q6IMI4 303 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 KRT28Q7Z3Y7 464 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 NPAS3Q8IXF0 933 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 IP6K1Q92551 441 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 EDEM1Q92611 657 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 GTPBP3Q969Y2 492 aaKnown RBP7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 ZNF428Q96B54 188 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 PHACTR3Q96KR7 559 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 IFT57Q9NWB7 429 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 DCTN4Q9UJW0 460 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 LMO7Q8WWI1 1683 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 PLEKHG2Q9H7P9 1386 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 NHSL1Q5SYE7 1610 aa7.05□□□□□ -1.28
NPIPB3-208ENST00000537983 PDGFAP04085 211 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 RARSP54136 660 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 MFAP1P55081 439 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 MARSP56192 900 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 GNAI1P63096 354 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 TNP2Q05952 138 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 PDE3AQ14432 1141 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 NUTM2GQ5VZR2 741 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 DNAJC14Q6Y2X3 702 aaPredicted RBP7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 VWA5B2Q8N398 1253 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 EXOC6Q8TAG9 804 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 GPR152Q8TDT2 470 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 CCDC136Q96JN2 1154 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 RBCK1Q9BYM8 510 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 BRD7Q9NPI1 651 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 ABCA3Q99758 1704 aa7.04□□□□□ -1.28
NPIPB3-208ENST00000537983 KIF16BQ96L93 1317 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 ZNF335Q9H4Z2 1342 aaPredicted RBP7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 DCDC2BA2VCK2 349 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 CDC14CA4D256 554 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 PLIN1O60240 522 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 IGHA2P01877 340 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 ZNF853P0CG23 659 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 MAPTP10636 758 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 CANXP27824 592 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 VEGFBP49765 207 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 SFSWAPQ12872 951 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 AAMPQ13685 434 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 SV2AQ7L0J3 742 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 ARHGEF25Q86VW2 580 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 GJD3Q8N144 294 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 TSR2Q969E8 191 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 ABHD17AQ96GS6 310 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 CRBNQ96SW2 442 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 STRN4Q9NRL3 753 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 FAM13BQ9NYF5 915 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 ATXN7L1Q9ULK2 861 aaPredicted RBP7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 POLIQ9UNA4 740 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 USP20Q9Y2K6 914 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 RTCBQ9Y3I0 505 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 KCNMB2Q9Y691 235 aa7.03□□□□□ -1.28
NPIPB3-208ENST00000537983 KHNYNO15037 678 aaKnown RBP7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 NDUFB5O43674 189 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 HTATSF1O43719 755 aaKnown RBP7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 BCAR3O75815 825 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 GCP02774 474 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 VSIG8P0DPA2 414 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 DNM1Q05193 864 aaKnown RBP7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 LAMC2Q13753 1193 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 TRIP4Q15650 581 aaPredicted RBP7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 ALDH1L2Q3SY69 923 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 RGL4Q8IZJ4 473 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 FAM129BQ96TA1 746 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 CFHR5Q9BXR6 569 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 BRPF3Q9ULD4 1205 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 MAP3K5Q99683 1374 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 COL18A1P39060 1754 aa7.02□□□□□ -1.29
NPIPB3-208ENST00000537983 SPATA31A3Q5VYP0 1347 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 OVOS2A0A0G2JMS6 1433 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 CRB1P82279 1406 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 RGPD2P0DJD1 1756 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 CPDO75976 1380 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 KIAA0232Q92628 1395 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 GPR25O00155 361 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 TERTO14746 1132 aaKnown RBP7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 EPB42P16452 691 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 MAPK1P28482 360 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 XPCQ01831 940 aaPredicted RBP7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 EXOSC9Q06265 439 aaKnown RBP7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 C20orf194Q5TEA3 1177 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 BRINP3Q76B58 766 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 PIK3R5Q8WYR1 880 aa7.01□□□□□ -1.29
NPIPB3-208ENST00000537983 ASB16Q96NS5 453 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms