RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 CDC37L1Q7L3B6 337 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 DHX37Q8IY37 1157 aaKnown RBP13.9□□□□□ -0.18
CIT-208ENST00000537607 PALD1Q9ULE6 856 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 GOLGA6L7A0A1B0GV03 622 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 E7EWF7 191 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 CTSWP56202 376 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 MYL5Q02045 173 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 USP21Q9UK80 565 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 IGSF1Q8N6C5 1336 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 hCG_1642624A0A1W2PR95 340 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 MRPL12P52815 198 aaKnown RBP13.9□□□□□ -0.18
CIT-208ENST00000537607 LRRC24Q50LG9 513 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 ZBTB21Q9ULJ3 1066 aa13.9□□□□□ -0.18
CIT-208ENST00000537607 UBXN1Q04323 297 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 NBPF14Q5TI25 921 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 KCNH3Q9ULD8 1083 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 CCDC172P0C7W6 258 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 SP4Q02446 784 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 HS2ST1Q7LGA3 356 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 FCHSD1Q86WN1 690 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 LEO1Q8WVC0 666 aaPredicted RBP13.89□□□□□ -0.19
CIT-208ENST00000537607 MPHOSPH6Q99547 160 aaKnown RBP13.89□□□□□ -0.19
CIT-208ENST00000537607 PLEKHG1Q9ULL1 1385 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 CCDC175P0C221 793 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 KRT40Q6A162 431 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 DPP8Q6V1X1 898 aaPredicted RBP13.89□□□□□ -0.19
CIT-208ENST00000537607 MAPKAPK5Q8IW41 473 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 TM6SF1Q9BZW5 370 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 TTC37Q6PGP7 1564 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 FAM13AO94988 1023 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 TBC1D5Q92609 795 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 CCDC42Q96M95 316 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.89□□□□□ -0.19
CIT-208ENST00000537607 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
CIT-208ENST00000537607 V9GYY5 206 aaPredicted RBP13.89□□□□□ -0.19
CIT-208ENST00000537607 MYOM2P54296 1465 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 GADD45BO75293 160 aaPredicted RBP13.88□□□□□ -0.19
CIT-208ENST00000537607 ME3Q16798 604 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 DSCC1Q9BVC3 393 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 BICDL2A1A5D9 508 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 PHACTR2O75167 634 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 USP37Q86T82 979 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 HOOK3Q86VS8 718 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 ASAP1Q9ULH1 1129 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 ZNF521Q96K83 1311 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 MLH3Q9UHC1 1453 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 DYNC1I1O14576 645 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 PKD2L1Q9P0L9 805 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 KCNJ14Q9UNX9 436 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 MAPK8IP1Q9UQF2 711 aa13.88□□□□□ -0.19
CIT-208ENST00000537607 IBTKQ9P2D0 1353 aaPredicted RBP13.87□□□□□ -0.19
CIT-208ENST00000537607 PRAMEF22A3QJZ6 481 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 KARSQ15046 597 aaKnown RBP13.87□□□□□ -0.19
CIT-208ENST00000537607 ZBTB38Q8NAP3 1195 aaPredicted RBP13.87□□□□□ -0.19
CIT-208ENST00000537607 FERMT2Q96AC1 680 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 TAOK3Q9H2K8 898 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 LZTFL1Q9NQ48 299 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 POLR2DO15514 142 aaKnown RBP13.87□□□□□ -0.19
CIT-208ENST00000537607 ECM2O94769 699 aaPredicted RBP13.87□□□□□ -0.19
CIT-208ENST00000537607 EZRP15311 586 aaKnown RBP13.87□□□□□ -0.19
CIT-208ENST00000537607 GYG1P46976 350 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 IFI16Q16666 785 aaKnown RBP13.87□□□□□ -0.19
CIT-208ENST00000537607 STK32BQ9NY57 414 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 CTAGE15A4D2H0 777 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 CTAGE8P0CG41 777 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 KIF5AQ12840 1032 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 AKNAD1Q5T1N1 836 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 CTAGE6Q86UF2 777 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 CTAGE4Q8IX94 777 aa13.87□□□□□ -0.19
CIT-208ENST00000537607 ZYXQ15942 572 aaKnown RBP13.86□□□□□ -0.19
CIT-208ENST00000537607 LUC7L2Q9Y383 392 aaKnown RBP13.86□□□□□ -0.19
CIT-208ENST00000537607 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
CIT-208ENST00000537607 KDM5CP41229 1560 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 USP17L12C9JPN9 530 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 USP17L21D6R901 530 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 CCT6AP40227 531 aaKnown RBP13.86□□□□□ -0.19
CIT-208ENST00000537607 TFAP4Q01664 338 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 TGFBRAP1Q8WUH2 860 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 USP6P35125 1406 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 SHTN1A0MZ66 631 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 PCCAP05165 728 aaPredicted RBP13.86□□□□□ -0.19
CIT-208ENST00000537607 TCP10Q12799 353 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 MRVI1Q9Y6F6 885 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 GJA3Q9Y6H8 435 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 ERBB4Q15303 1308 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 TACC1O75410 805 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 TXKP42681 527 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 FAM47AQ5JRC9 791 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 SV2BQ7L1I2 683 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.192e-6■■■■■ 32.6
CIT-208ENST00000537607 GUCA1BQ9UMX6 200 aa13.86□□□□□ -0.19
CIT-208ENST00000537607 TTC38Q5R3I4 469 aa13.85□□□□□ -0.19
CIT-208ENST00000537607 NEK11Q8NG66 645 aa13.85□□□□□ -0.19
CIT-208ENST00000537607 PLA2R1Q13018 1463 aa13.85□□□□□ -0.19
CIT-208ENST00000537607 BRD1O95696 1058 aa13.85□□□□□ -0.19
CIT-208ENST00000537607 PDE6AP16499 860 aa13.85□□□□□ -0.19
CIT-208ENST00000537607 BCAMP50895 628 aa13.85□□□□□ -0.19
CIT-208ENST00000537607 GRM1Q13255 1194 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms