RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 RGL1Q9NZL6 768 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 ZCCHC11Q5TAX3 1644 aaKnown RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 A0A087WWV3 80 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 MAP4K4O95819 1239 aaPredicted RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 PDHBP11177 359 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 KARSQ15046 597 aaKnown RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 DPCR1Q3MIW9 517 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 MYSM1Q5VVJ2 828 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 TAX1BP1Q86VP1 789 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 NCAPG2Q86XI2 1143 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 RBM12BQ8IXT5 1001 aaKnown RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 TRIM58Q8NG06 486 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 RIN2Q8WYP3 895 aaPredicted RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 RABEP2Q9H5N1 569 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 HOOK1Q9UJC3 728 aaKnown RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 CORO1CQ9ULV4 474 aaPredicted RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 CDK12Q9NYV4 1490 aaPredicted RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 EFCAB6Q5THR3 1501 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 HNRNPMP52272 730 aaKnown RBP eCLIP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 NLRP12P59046 1061 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 RESTQ13127 1097 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 THEMIS2Q5TEJ8 643 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 MIS18BP1Q6P0N0 1132 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 TOGARAM2Q6ZUX3 1019 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 SPATA21Q7Z572 469 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 FSIP1Q8NA03 581 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 RUFY2Q8WXA3 655 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 MEIS3Q99687 375 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 IL25Q9H293 177 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 KDM4CQ9H3R0 1056 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 TAOK2Q9UL54 1235 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 LIN7AO14910 233 aaPredicted RBP9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 PSMA5P28066 241 aa9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 AKAP17AQ02040 695 aaKnown RBP9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 NCAPHQ15003 741 aa9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 CCDC121Q6ZUS5 278 aa9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 ARHGEF25Q86VW2 580 aa9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 UNC5CLQ8IV45 518 aa9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 EHD4Q9H223 541 aa9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 MBIPQ9NS73 344 aa9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 TPX2Q9ULW0 747 aaKnown RBP9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 TRPC6Q9Y210 931 aa9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 MAP3K4Q9Y6R4 1608 aa9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 ZC3H4Q9UPT8 1303 aaKnown RBP9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 TUBGCP6Q96RT7 1819 aa9.65□□□□□ -0.86
SRGAP1-202ENST00000537556 TARSL2A2RTX5 802 aaKnown RBP9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 PLEKHD1A6NEE1 506 aa9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 H7C1W4 665 aa9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 DTNBO60941 627 aa9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 PYGLP06737 847 aa9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 FERP16591 822 aa9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 PAPOLAP51003 745 aaKnown RBP9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 ROR2Q01974 943 aaKnown RBP9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 SF3A1Q15459 793 aaKnown RBP9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 CWF19L1Q69YN2 538 aaKnown RBP9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 GOLPH3LQ9H4A5 285 aa9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 GOPCQ9HD26 462 aa9.65□□□□□ -0.87
SRGAP1-202ENST00000537556 ASXL2Q76L83 1435 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 ZNF569Q5MCW4 686 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 ARMC3Q5W041 872 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 BZW1Q7L1Q6 419 aaKnown RBP9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 FAM228AQ86W67 206 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 CCDC170Q8IYT3 715 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 CNTROBQ8N137 903 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 PDILTQ8N807 584 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 ZNF396Q96N95 335 aaPredicted RBP9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 ALS2CR12Q96Q35 445 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 NAPGQ99747 312 aaPredicted RBP9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 SLC39A2Q9NP94 309 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 LMCD1Q9NZU5 365 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 PCDHGA4Q9Y5G9 962 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 BUB1BO60566 1050 aaPredicted RBP9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 SDCCAG8Q86SQ7 713 aaPredicted RBP9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 B4GALNT2Q8NHY0 566 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 EPN3Q9H201 632 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 LZTFL1Q9NQ48 299 aa9.64□□□□□ -0.87
SRGAP1-202ENST00000537556 GOLGA6L10A6NI86 522 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 AGPSO00116 658 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 SMNDC1O75940 238 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 ME1P48163 572 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 USP14P54578 494 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 CEBPZQ03701 1054 aaKnown RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 NAA35Q5VZE5 725 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 RASSF8Q8NHQ8 419 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 FAM81AQ8TBF8 368 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 MRPS27Q92552 414 aaKnown RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 MKL1Q969V6 931 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 MMTAG2Q9BU76 263 aaKnown RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 IRX2Q9BZI1 471 aaPredicted RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 PAPOLBQ9NRJ5 636 aaKnown RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 MAP3K5Q99683 1374 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 ZC3H13Q5T200 1668 aaKnown RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 RAB11FIP3O75154 756 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 GNAI2P04899 355 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 SSBP05455 408 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 SLC3A2P08195 630 aaKnown RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 FAM163BP0C2L3 166 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 GCLCP48506 637 aaPredicted RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 CD151P48509 253 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms