RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 WDR66Q8TBY9 1149 aa15.33■□□□□ 0.05
CDK5RAP3-202ENST00000536708 MAP4K1Q92918 833 aa15.33■□□□□ 0.05
CDK5RAP3-202ENST00000536708 ARMT1Q9H993 441 aa15.33■□□□□ 0.05
CDK5RAP3-202ENST00000536708 WDR33Q9C0J8 1336 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-202ENST00000536708 SALL1Q9NSC2 1324 aa15.33■□□□□ 0.04
CDK5RAP3-202ENST00000536708 LAMB1P07942 1786 aa15.33■□□□□ 0.04
CDK5RAP3-202ENST00000536708 G3V3G9 751 aa15.33■□□□□ 0.04
CDK5RAP3-202ENST00000536708 NFKBIEO00221 500 aa15.33■□□□□ 0.04
CDK5RAP3-202ENST00000536708 HSPD1P10809 573 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-202ENST00000536708 COL9A3Q14050 684 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-202ENST00000536708 DCAF8Q5TAQ9 597 aa15.33■□□□□ 0.04
CDK5RAP3-202ENST00000536708 NAA16Q6N069 864 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-202ENST00000536708 NAV1Q8NEY1 1877 aa15.33■□□□□ 0.04
CDK5RAP3-202ENST00000536708 ECM29Q5VYK3 1845 aa15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 YDJCA8MPS7 323 aa15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 LDHBP07195 334 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 NCLP19338 710 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 RASSF7Q02833 373 aa15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 DZIP1Q86YF9 867 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 RTKN2Q8IZC4 609 aa15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 AIDAQ96BJ3 306 aa15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 PSMD1Q99460 953 aa15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 LIMCH1Q9UPQ0 1083 aa15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 FAM205AQ6ZU69 1335 aa15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 FOCADQ5VW36 1801 aa15.32■□□□□ 0.04
CDK5RAP3-202ENST00000536708 F8W031 263 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 ZBTB22O15209 634 aa15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 RRP9O43818 475 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 DYNLL1P63167 89 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 TTLL5Q6EMB2 1281 aa15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 TICAM2Q86XR7 235 aa15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 TRIM44Q96DX7 344 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 SBF1O95248 1867 aa15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 PRKAB2O43741 272 aa15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 GLIPR1L2Q4G1C9 344 aa15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 LRSAM1Q6UWE0 723 aa15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 EPB41L4AQ9HCS5 686 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 TMEM63CQ9P1W3 806 aa15.31■□□□□ 0.04
CDK5RAP3-202ENST00000536708 AK2P54819 239 aa15.3■□□□□ 0.04
CDK5RAP3-202ENST00000536708 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
CDK5RAP3-202ENST00000536708 CREB3L3Q68CJ9 461 aa15.3■□□□□ 0.04
CDK5RAP3-202ENST00000536708 LARGE2Q8N3Y3 721 aa15.3■□□□□ 0.04
CDK5RAP3-202ENST00000536708 TMEM87AQ8NBN3 555 aa15.3■□□□□ 0.04
CDK5RAP3-202ENST00000536708 SUPT20HQ8NEM7 779 aa15.3■□□□□ 0.04
CDK5RAP3-202ENST00000536708 ANP32BQ92688 251 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-202ENST00000536708 STRBPQ96SI9 672 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-202ENST00000536708 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-202ENST00000536708 DDX60LQ5H9U9 1706 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-202ENST00000536708 RPAP1Q9BWH6 1393 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 SLC27A2O14975 620 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 PRELPP51888 382 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 ADCK5Q3MIX3 580 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 RUFY3Q7L099 469 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 RIOK1Q9BRS2 568 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 TAOK3Q9H2K8 898 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 ZSWIM6Q9HCJ5 1215 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 AATFQ9NY61 560 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 DICER1Q9UPY3 1922 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 CPA1P15085 419 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 HS1BP3Q53T59 392 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 SOGA3Q5TF21 947 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 NOL8Q76FK4 1167 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 PODNQ7Z5L7 613 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 SDR42E1Q8WUS8 393 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 ZSCAN31Q96LW9 406 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 DSCC1Q9BVC3 393 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 RBSNQ9H1K0 784 aa15.29■□□□□ 0.04
CDK5RAP3-202ENST00000536708 TIAM2Q8IVF5 1701 aa15.28■□□□□ 0.04
CDK5RAP3-202ENST00000536708 MAGEB6P1A0A0J9YX57 407 aa15.28■□□□□ 0.04
CDK5RAP3-202ENST00000536708 CYP21A2P08686 494 aa15.28■□□□□ 0.04
CDK5RAP3-202ENST00000536708 SPTY2D1Q68D10 685 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-202ENST00000536708 SYT17Q9BSW7 474 aa15.28■□□□□ 0.04
CDK5RAP3-202ENST00000536708 RBM27Q9P2N5 1060 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-202ENST00000536708 IARSP41252 1262 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-202ENST00000536708 SCNN1DP51172 638 aa15.27■□□□□ 0.04
CDK5RAP3-202ENST00000536708 HAND2P61296 217 aa15.27■□□□□ 0.04
CDK5RAP3-202ENST00000536708 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-202ENST00000536708 DACT2Q5SW24 774 aa15.27■□□□□ 0.04
CDK5RAP3-202ENST00000536708 TBC1D22AQ8WUA7 517 aa15.27■□□□□ 0.04
CDK5RAP3-202ENST00000536708 CHAMP1Q96JM3 812 aa15.27■□□□□ 0.04
CDK5RAP3-202ENST00000536708 PDLIM2Q96JY6 352 aa15.27■□□□□ 0.04
CDK5RAP3-202ENST00000536708 SH2B1Q9NRF2 756 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-202ENST00000536708 MROH7-TTC4A0A0A0MT08 1334 aa15.27■□□□□ 0.03
CDK5RAP3-202ENST00000536708 MYH1P12882 1939 aa15.27■□□□□ 0.03
CDK5RAP3-202ENST00000536708 RAD17O75943 681 aa15.27■□□□□ 0.03
CDK5RAP3-202ENST00000536708 APPP05067 770 aa15.27■□□□□ 0.03
CDK5RAP3-202ENST00000536708 TPM2P07951 284 aa15.27■□□□□ 0.03
CDK5RAP3-202ENST00000536708 GRIPAP1Q4V328 841 aa15.27■□□□□ 0.03
CDK5RAP3-202ENST00000536708 SLC4A4Q9Y6R1 1079 aa15.27■□□□□ 0.03
CDK5RAP3-202ENST00000536708 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.03
CDK5RAP3-202ENST00000536708 GSG1L2A8MUP6 293 aa15.26■□□□□ 0.03
CDK5RAP3-202ENST00000536708 FGAP02671 866 aa15.26■□□□□ 0.03
CDK5RAP3-202ENST00000536708 CASTP20810 708 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-202ENST00000536708 FOXD4L5Q5VV16 416 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-202ENST00000536708 STOX1Q6ZVD7 989 aa15.26■□□□□ 0.03
CDK5RAP3-202ENST00000536708 KIAA0825Q8IV33 1275 aa15.26■□□□□ 0.03
CDK5RAP3-202ENST00000536708 FOXD4L4Q8WXT5 416 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-202ENST00000536708 SYAP1Q96A49 352 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-202ENST00000536708 PCDHAC2Q9Y5I4 1007 aa15.26■□□□□ 0.03
CDK5RAP3-202ENST00000536708 SMIM22K7EJ46 135 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms