RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 ADALQ6DHV7 355 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 FAM177A1Q8N128 213 aaPredicted RBP11.58□□□□□ -0.56
RFX4-204ENST00000536688 HOOK2Q96ED9 719 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 ACTR5Q9H9F9 607 aaPredicted RBP11.58□□□□□ -0.56
RFX4-204ENST00000536688 CPSF2Q9P2I0 782 aaKnown RBP11.58□□□□□ -0.56
RFX4-204ENST00000536688 MYO6Q9UM54 1294 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 KDM6AO15550 1401 aaPredicted RBP11.58□□□□□ -0.56
RFX4-204ENST00000536688 GOLGA8KD6RF30 607 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 PECAM1P16284 738 aaPredicted RBP11.57□□□□□ -0.56
RFX4-204ENST00000536688 SNCBQ16143 134 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 CDCA2Q69YH5 1023 aaPredicted RBP11.57□□□□□ -0.56
RFX4-204ENST00000536688 PRPF40BQ6NWY9 871 aaKnown RBP11.57□□□□□ -0.56
RFX4-204ENST00000536688 CCDC148Q8NFR7 591 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 HSD3B7Q9H2F3 369 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 UGGT1Q9NYU2 1555 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 CEMIPQ8WUJ3 1361 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 H3BQV1 296 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
RFX4-204ENST00000536688 EPB41P11171 864 aaKnown RBP11.57□□□□□ -0.56
RFX4-204ENST00000536688 RPS6KA3P51812 740 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 MYL5Q02045 173 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 IFFO2Q5TF58 517 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 RUBCNQ92622 972 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 RPGRIP1Q96KN7 1286 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 GGNBP2Q9H3C7 697 aa11.57□□□□□ -0.56
RFX4-204ENST00000536688 PUF60Q9UHX1 559 aaKnown RBP11.57□□□□□ -0.56
RFX4-204ENST00000536688 LMTK2Q8IWU2 1503 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 CLTCQ00610 1675 aaKnown RBP11.56□□□□□ -0.56
RFX4-204ENST00000536688 GOLGA6L7A0A1B0GV03 622 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 CHL1O00533 1208 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 COQ9O75208 318 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 SERPINC1P01008 464 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 RPS6KB1P23443 525 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 GCKP35557 465 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 CREB3L3Q68CJ9 461 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 BLOC1S2Q6QNY1 142 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 MICAL1Q8TDZ2 1067 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 BRF1Q92994 677 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 PANX2Q96RD6 677 aa11.56□□□□□ -0.56
RFX4-204ENST00000536688 DDX20Q9UHI6 824 aaKnown RBP11.56□□□□□ -0.56
RFX4-204ENST00000536688 SLC3A2P08195 630 aaKnown RBP11.55□□□□□ -0.56
RFX4-204ENST00000536688 CFAP100Q494V2 611 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 EMC10Q5UCC4 262 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 TOGARAM2Q6ZUX3 1019 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 TC2NQ8N9U0 490 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 SAAL1Q96ER3 474 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 RSRC1Q96IZ7 334 aaKnown RBP11.55□□□□□ -0.56
RFX4-204ENST00000536688 HMG20BQ9P0W2 317 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 NEDD4P46934 1319 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 NEXMIFQ5QGS0 1516 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 DIP2CQ9Y2E4 1556 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 HIP1O00291 1037 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 GLRX3O76003 335 aaKnown RBP11.55□□□□□ -0.56
RFX4-204ENST00000536688 RHOXF2BP0C7M4 288 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 LMOD1P29536 600 aaPredicted RBP11.55□□□□□ -0.56
RFX4-204ENST00000536688 USP14P54578 494 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 DRAXINQ8NBI3 349 aaPredicted RBP11.55□□□□□ -0.56
RFX4-204ENST00000536688 SMARCC2Q8TAQ2 1214 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 SSH3Q8TE77 659 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 MAP4K1Q92918 833 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 RHOXF2Q9BQY4 288 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 ZSWIM4Q9H7M6 989 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 SPG7Q9UQ90 795 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 KDRP35968 1356 aa11.55□□□□□ -0.56
RFX4-204ENST00000536688 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 NDUFAB1O14561 156 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 OPA1O60313 960 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 MAP4K4O95819 1239 aaPredicted RBP11.54□□□□□ -0.56
RFX4-204ENST00000536688 GGCXP38435 758 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 GNGT1P63211 74 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 PTH1RQ03431 593 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 TOB2Q14106 344 aaPredicted RBP11.54□□□□□ -0.56
RFX4-204ENST00000536688 SPECC1LQ69YQ0 1117 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 TTLL7Q6ZT98 887 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 C3orf20Q8ND61 904 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 NAPGQ99747 312 aaPredicted RBP11.54□□□□□ -0.56
RFX4-204ENST00000536688 RTEL1Q9NZ71 1219 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 PNMA6EA0A0J9YXQ4 647 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 LIN7AO14910 233 aaPredicted RBP11.54□□□□□ -0.56
RFX4-204ENST00000536688 ATP5JP18859 108 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 ME1P48163 572 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 KLHL23Q8NBE8 558 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 STK31Q9BXU1 1019 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 SLC40A1Q9NP59 571 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 TUBE1Q9UJT0 475 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 ADGRG1Q9Y653 693 aa11.54□□□□□ -0.56
RFX4-204ENST00000536688 MLH3Q9UHC1 1453 aa11.53□□□□□ -0.56
RFX4-204ENST00000536688 CACNA1FO60840 1977 aa11.53□□□□□ -0.56
RFX4-204ENST00000536688 MROH1Q8NDA8 1641 aa11.53□□□□□ -0.56
RFX4-204ENST00000536688 AGPSO00116 658 aa11.53□□□□□ -0.56
RFX4-204ENST00000536688 HSP90AB2PQ58FF8 381 aa11.53□□□□□ -0.56
RFX4-204ENST00000536688 CCDC13Q8IYE1 715 aa11.53□□□□□ -0.56
RFX4-204ENST00000536688 OR8K1Q8NGG5 319 aa11.53□□□□□ -0.56
RFX4-204ENST00000536688 MRPL44Q9H9J2 332 aaKnown RBP11.53□□□□□ -0.56
RFX4-204ENST00000536688 TTF2Q9UNY4 1162 aaKnown RBP11.53□□□□□ -0.56
RFX4-204ENST00000536688 RBM8AQ9Y5S9 174 aaKnown RBP11.53□□□□□ -0.56
RFX4-204ENST00000536688 ADAMTSL3P82987 1691 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms