RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 IFIT1P09914 478 aaKnown RBP15.46■□□□□ 0.07
PRKDC-207ENST00000536483 FAM43AQ8N2R8 423 aa15.46■□□□□ 0.07
PRKDC-207ENST00000536483 ZDHHC15Q96MV8 337 aa15.46■□□□□ 0.07
PRKDC-207ENST00000536483 MRIQ9BWK5 157 aa15.46■□□□□ 0.07
PRKDC-207ENST00000536483 ZFYVE28Q9HCC9 887 aa15.46■□□□□ 0.07
PRKDC-207ENST00000536483 SPDYE5A6NIY4 337 aa15.45■□□□□ 0.06
PRKDC-207ENST00000536483 ZBTB7BO15156 539 aaPredicted RBP15.45■□□□□ 0.06
PRKDC-207ENST00000536483 APOBEC3HQ6NTF7 200 aaKnown RBP15.45■□□□□ 0.06
PRKDC-207ENST00000536483 CLUAP1Q96AJ1 413 aa15.45■□□□□ 0.06
PRKDC-207ENST00000536483 ARMC5Q96C12 935 aa15.45■□□□□ 0.06
PRKDC-207ENST00000536483 WRNIP1Q96S55 665 aa15.45■□□□□ 0.06
PRKDC-207ENST00000536483 TMOD2Q9NZR1 351 aa15.45■□□□□ 0.06
PRKDC-207ENST00000536483 CEP126Q9P2H0 1117 aa15.45■□□□□ 0.06
PRKDC-207ENST00000536483 SUGT1Q9Y2Z0 365 aa15.45■□□□□ 0.06
PRKDC-207ENST00000536483 SNCAIPQ9Y6H5 919 aa15.45■□□□□ 0.06
PRKDC-207ENST00000536483 SRGAP3O43295 1099 aa15.44■□□□□ 0.06
PRKDC-207ENST00000536483 EN2P19622 333 aaPredicted RBP15.44■□□□□ 0.06
PRKDC-207ENST00000536483 FAM83AQ86UY5 434 aa15.44■□□□□ 0.06
PRKDC-207ENST00000536483 ZKSCAN4Q969J2 545 aaPredicted RBP15.44■□□□□ 0.06
PRKDC-207ENST00000536483 RLBP1P12271 317 aa15.43■□□□□ 0.06
PRKDC-207ENST00000536483 SLC5A1P13866 664 aa15.43■□□□□ 0.06
PRKDC-207ENST00000536483 POLA2Q14181 598 aa15.43■□□□□ 0.06
PRKDC-207ENST00000536483 HHIPL2Q6UWX4 724 aa15.43■□□□□ 0.06
PRKDC-207ENST00000536483 ERO1BQ86YB8 467 aa15.43■□□□□ 0.06
PRKDC-207ENST00000536483 PA2G4Q9UQ80 394 aaKnown RBP15.43■□□□□ 0.06
PRKDC-207ENST00000536483 PTCH2Q9Y6C5 1203 aa15.43■□□□□ 0.06
PRKDC-207ENST00000536483 MAST3O60307 1309 aa15.43■□□□□ 0.06
PRKDC-207ENST00000536483 IRF6O14896 467 aa15.42■□□□□ 0.06
PRKDC-207ENST00000536483 CETPP11597 493 aa15.42■□□□□ 0.06
PRKDC-207ENST00000536483 MS4A1P11836 297 aa15.42■□□□□ 0.06
PRKDC-207ENST00000536483 ARHGEF6Q15052 776 aa15.42■□□□□ 0.06
PRKDC-207ENST00000536483 FKBP1CQ5VVH2 108 aa15.42■□□□□ 0.06
PRKDC-207ENST00000536483 MIGA2Q7L4E1 593 aa15.42■□□□□ 0.06
PRKDC-207ENST00000536483 SSH3Q8TE77 659 aa15.42■□□□□ 0.06
PRKDC-207ENST00000536483 HOOK2Q96ED9 719 aa15.42■□□□□ 0.06
PRKDC-207ENST00000536483 BTBD19C9JJ37 291 aa15.41■□□□□ 0.06
PRKDC-207ENST00000536483 SEMA3EO15041 775 aa15.41■□□□□ 0.06
PRKDC-207ENST00000536483 TLR2O60603 784 aa15.41■□□□□ 0.06
PRKDC-207ENST00000536483 WDHD1O75717 1129 aaPredicted RBP15.41■□□□□ 0.06
PRKDC-207ENST00000536483 ATP8B2P98198 1209 aa15.41■□□□□ 0.06
PRKDC-207ENST00000536483 SNAPC2Q13487 334 aa15.41■□□□□ 0.06
PRKDC-207ENST00000536483 ATP2B3Q16720 1220 aa15.41■□□□□ 0.06
PRKDC-207ENST00000536483 FTSJ3Q8IY81 847 aaKnown RBP15.41■□□□□ 0.06
PRKDC-207ENST00000536483 WDR66Q8TBY9 1149 aa15.41■□□□□ 0.06
PRKDC-207ENST00000536483 ZNF333Q96JL9 665 aa15.41■□□□□ 0.06
PRKDC-207ENST00000536483 TMEM106CQ9BVX2 250 aa15.41■□□□□ 0.06
PRKDC-207ENST00000536483 SIL1Q9H173 461 aa15.41■□□□□ 0.06
PRKDC-207ENST00000536483 PNMA6EA0A0J9YXQ4 647 aa15.4■□□□□ 0.06
PRKDC-207ENST00000536483 INPP5BP32019 993 aa15.4■□□□□ 0.06
PRKDC-207ENST00000536483 PPIL2Q13356 520 aa15.4■□□□□ 0.06
PRKDC-207ENST00000536483 SLC9C1Q4G0N8 1177 aa15.4■□□□□ 0.06
PRKDC-207ENST00000536483 DCAF15Q66K64 600 aa15.4■□□□□ 0.06
PRKDC-207ENST00000536483 NBPF11Q86T75 865 aa15.4■□□□□ 0.06
PRKDC-207ENST00000536483 GCC1Q96CN9 775 aa15.4■□□□□ 0.06
PRKDC-207ENST00000536483 ZNF341Q9BYN7 854 aa15.4■□□□□ 0.06
PRKDC-207ENST00000536483 ARHGAP39Q9C0H5 1083 aa15.4■□□□□ 0.06
PRKDC-207ENST00000536483 AKAP2Q9Y2D5 859 aa15.4■□□□□ 0.06
PRKDC-207ENST00000536483 PDS5AQ29RF7 1337 aaKnown RBP15.4■□□□□ 0.06
PRKDC-207ENST00000536483 MYCP01106 439 aaPredicted RBP15.39■□□□□ 0.05
PRKDC-207ENST00000536483 TCP10Q12799 353 aa15.39■□□□□ 0.05
PRKDC-207ENST00000536483 DIXDC1Q155Q3 683 aa15.39■□□□□ 0.05
PRKDC-207ENST00000536483 FAM151AQ8WW52 585 aa15.39■□□□□ 0.05
PRKDC-207ENST00000536483 ZCCHC17Q9NP64 241 aaKnown RBP15.39■□□□□ 0.05
PRKDC-207ENST00000536483 NOP58Q9Y2X3 529 aaKnown RBP15.39■□□□□ 0.05
PRKDC-207ENST00000536483 DAGLAQ9Y4D2 1042 aa15.39■□□□□ 0.05
PRKDC-207ENST00000536483 SALL1Q9NSC2 1324 aa15.39■□□□□ 0.05
PRKDC-207ENST00000536483 RPAP1Q9BWH6 1393 aaPredicted RBP15.38■□□□□ 0.05
PRKDC-207ENST00000536483 ECM2O94769 699 aaPredicted RBP15.38■□□□□ 0.05
PRKDC-207ENST00000536483 PRDX5P30044 214 aa15.38■□□□□ 0.05
PRKDC-207ENST00000536483 LACTBP83111 547 aaPredicted RBP15.38■□□□□ 0.05
PRKDC-207ENST00000536483 PPATQ06203 517 aa15.38■□□□□ 0.05
PRKDC-207ENST00000536483 NFIAQ12857 509 aa15.38■□□□□ 0.05
PRKDC-207ENST00000536483 KIF22Q14807 665 aa15.38■□□□□ 0.05
PRKDC-207ENST00000536483 SLC4A8Q2Y0W8 1093 aa15.38■□□□□ 0.05
PRKDC-207ENST00000536483 CDC42EP5Q6NZY7 148 aa15.38■□□□□ 0.05
PRKDC-207ENST00000536483 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.38■□□□□ 0.05
PRKDC-207ENST00000536483 GPR108Q9NPR9 543 aa15.38■□□□□ 0.05
PRKDC-207ENST00000536483 GNL3LQ9NVN8 582 aaKnown RBP15.38■□□□□ 0.05
PRKDC-207ENST00000536483 RBBP6Q7Z6E9 1792 aaKnown RBP15.38■□□□□ 0.05
PRKDC-207ENST00000536483 TFCP2Q12800 502 aa15.37■□□□□ 0.05
PRKDC-207ENST00000536483 CCDC102BQ68D86 513 aa15.37■□□□□ 0.05
PRKDC-207ENST00000536483 ITPRIPQ8IWB1 547 aa15.37■□□□□ 0.05
PRKDC-207ENST00000536483 SH3TC2Q8TF17 1288 aa15.37■□□□□ 0.05
PRKDC-207ENST00000536483 RCAN3Q9UKA8 241 aa15.37■□□□□ 0.05
PRKDC-207ENST00000536483 DENND2AQ9ULE3 1009 aa15.37■□□□□ 0.05
PRKDC-207ENST00000536483 A0A1B0GUL7 405 aa15.36■□□□□ 0.05
PRKDC-207ENST00000536483 TIMM10P62072 90 aa15.36■□□□□ 0.05
PRKDC-207ENST00000536483 G3BP1Q13283 466 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRKDC-207ENST00000536483 HABP4Q5JVS0 413 aaKnown RBP15.36■□□□□ 0.05
PRKDC-207ENST00000536483 C17orf99Q6UX52 265 aa15.36■□□□□ 0.05
PRKDC-207ENST00000536483 USP40Q9NVE5 1235 aa15.36■□□□□ 0.05
PRKDC-207ENST00000536483 CPA4Q9UI42 421 aa15.36■□□□□ 0.05
PRKDC-207ENST00000536483 ZNF112Q9UJU3 913 aa15.36■□□□□ 0.05
PRKDC-207ENST00000536483 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.36■□□□□ 0.05
PRKDC-207ENST00000536483 PDHXO00330 501 aa15.35■□□□□ 0.05
PRKDC-207ENST00000536483 LDHBP07195 334 aaKnown RBP15.35■□□□□ 0.05
PRKDC-207ENST00000536483 CTGFP29279 349 aa15.35■□□□□ 0.05
PRKDC-207ENST00000536483 PHKA1P46020 1223 aa15.35■□□□□ 0.05
PRKDC-207ENST00000536483 MVPQ14764 893 aaKnown RBP15.35■□□□□ 0.05
PRKDC-207ENST00000536483 ANKRD23Q86SG2 305 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms