RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 CCDC102AQ96A19 550 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 PUF60Q9UHX1 559 aaKnown RBP14.81□□□□□ -0.04
PTPN21-202ENST00000536337 NFE2L3Q9Y4A8 694 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 SIGLEC1Q9BZZ2 1709 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 KIF5CO60282 957 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 IFIT1BQ5T764 474 aaKnown RBP14.81□□□□□ -0.04
PTPN21-202ENST00000536337 CARD6Q9BX69 1037 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 KRT23Q9C075 422 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 V9GY48 417 aaPredicted RBP14.81□□□□□ -0.04
PTPN21-202ENST00000536337 NLRP12P59046 1061 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 LINC00301Q8NCQ3 95 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 NOC3LQ8WTT2 800 aaKnown RBP14.8□□□□□ -0.04
PTPN21-202ENST00000536337 ZHX3Q9H4I2 956 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 STX8Q9UNK0 236 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 CCDC66A2RUB6 948 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 DNA2P51530 1060 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 VWA3AA6NCI4 1184 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 TRIM75PA6NK02 468 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 CCT6AP40227 531 aaKnown RBP14.8□□□□□ -0.04
PTPN21-202ENST00000536337 USP5P45974 858 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 MCM6Q14566 821 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 ZNF397Q8NF99 534 aaPredicted RBP14.8□□□□□ -0.04
PTPN21-202ENST00000536337 TRIM34Q9BYJ4 488 aa14.8□□□□□ -0.04
PTPN21-202ENST00000536337 PDE6AP16499 860 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 RRAGBQ5VZM2 374 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 SDR42E1Q8WUS8 393 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 ESR2Q92731 530 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 BMS1Q14692 1282 aaKnown RBP14.79□□□□□ -0.04
PTPN21-202ENST00000536337 ENOX2Q16206 610 aaKnown RBP14.79□□□□□ -0.04
PTPN21-202ENST00000536337 GPIHBP1Q8IV16 184 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 MRFAP1L1Q96HT8 127 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 DESI2Q9BSY9 194 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 YEATS4O95619 227 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 GRAMD1CQ8IYS0 662 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 VPS54Q9P1Q0 977 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 WWC3Q9ULE0 1092 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 PCDHA5Q9Y5H7 936 aa14.79□□□□□ -0.04
PTPN21-202ENST00000536337 H7C1W4 665 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 PRKAB2O43741 272 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 MCM7P33993 719 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 BCAMP50895 628 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 SMAP1Q8IYB5 467 aaPredicted RBP14.78□□□□□ -0.04
PTPN21-202ENST00000536337 EEF2KMTQ96G04 330 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 BAG1Q99933 345 aaPredicted RBP14.78□□□□□ -0.04
PTPN21-202ENST00000536337 TANGO6Q9C0B7 1094 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 RTEL1Q9NZ71 1219 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 OGFRQ9NZT2 677 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 SERTAD1Q9UHV2 236 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 DZIP1Q86YF9 867 aaKnown RBP14.78□□□□□ -0.04
PTPN21-202ENST00000536337 CDK5RAP3Q96JB5 506 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 CNNM2Q9H8M5 875 aa14.78□□□□□ -0.04
PTPN21-202ENST00000536337 CEMIPQ8WUJ3 1361 aa14.77□□□□□ -0.04
PTPN21-202ENST00000536337 CCDC152Q4G0S7 254 aa14.77□□□□□ -0.04
PTPN21-202ENST00000536337 KIAA1328Q86T90 577 aa14.77□□□□□ -0.04
PTPN21-202ENST00000536337 SPATA5Q8NB90 893 aa14.77□□□□□ -0.04
PTPN21-202ENST00000536337 ZNHIT6Q9NWK9 470 aaKnown RBP14.77□□□□□ -0.04
PTPN21-202ENST00000536337 ANKIB1Q9P2G1 1089 aa14.77□□□□□ -0.04
PTPN21-202ENST00000536337 ERO1AQ96HE7 468 aa14.77□□□□□ -0.04
PTPN21-202ENST00000536337 USP42Q9H9J4 1324 aaKnown RBP14.77□□□□□ -0.05
PTPN21-202ENST00000536337 CCDC194A0A1B0GVG4 234 aa14.77□□□□□ -0.05
PTPN21-202ENST00000536337 ZNF609O15014 1411 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 MAGEB6P1A0A0J9YX57 407 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 PIP4K2BP78356 416 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 LONRF3Q496Y0 759 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 CCDC70Q6NSX1 233 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 VPS16Q9H269 839 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 DEF6Q9H4E7 631 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 KIF20BQ96Q89 1820 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 CMA1P23946 247 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 EVCP57679 992 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 NR5A1Q13285 461 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 STIM1Q13586 685 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 PUM3Q15397 648 aaKnown RBP14.76□□□□□ -0.05
PTPN21-202ENST00000536337 HLFQ16534 295 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 JAKMIP3Q5VZ66 844 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 APOA5Q6Q788 366 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 ATG9AQ7Z3C6 839 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 IFNL3Q8IZI9 196 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 PHACTR2O75167 634 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 UBA7P41226 1012 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 TMEM87BQ96K49 555 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 FEZ1Q99689 392 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 DENND2AQ9ULE3 1009 aa14.76□□□□□ -0.05
PTPN21-202ENST00000536337 FOXO4P98177 505 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 KIF23Q02241 960 aaPredicted RBP14.75□□□□□ -0.05
PTPN21-202ENST00000536337 AXDND1Q5T1B0 1012 aaPredicted RBP14.75□□□□□ -0.05
PTPN21-202ENST00000536337 ZBTB38Q8NAP3 1195 aaPredicted RBP14.75□□□□□ -0.05
PTPN21-202ENST00000536337 SEC31BQ9NQW1 1179 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 SH3TC1Q8TE82 1336 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 ERCC3P19447 782 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 ZBTB1Q9Y2K1 713 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 PDE8AO60658 829 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 RHOXF2BP0C7M4 288 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 MCAMP43121 646 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 ZNF569Q5MCW4 686 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 CDC5LQ99459 802 aaKnown RBP14.75□□□□□ -0.05
PTPN21-202ENST00000536337 RHOXF2Q9BQY4 288 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 BLZF1Q9H2G9 400 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 TMEM94Q12767 1356 aa14.75□□□□□ -0.05
PTPN21-202ENST00000536337 CTDNEP1O95476 244 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms