RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 FKBP1CQ5VVH2 108 aa17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 CDC42EP5Q6NZY7 148 aa17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 CTU1Q7Z7A3 348 aaKnown RBP17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 CSADQ9Y600 493 aa17.66■□□□□ 0.42
RTN3P1-201ENST00000536295 IGF2BP3O00425 579 aaKnown RBP eCLIP17.65■□□□□ 0.42
RTN3P1-201ENST00000536295 ALDH1A1P00352 501 aa17.65■□□□□ 0.42
RTN3P1-201ENST00000536295 DZIP1Q86YF9 867 aaKnown RBP17.65■□□□□ 0.42
RTN3P1-201ENST00000536295 ZGPATQ8N5A5 531 aaKnown RBP17.65■□□□□ 0.42
RTN3P1-201ENST00000536295 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.65■□□□□ 0.42
RTN3P1-201ENST00000536295 USP40Q9NVE5 1235 aa17.65■□□□□ 0.42
RTN3P1-201ENST00000536295 NFIAQ12857 509 aa17.64■□□□□ 0.41
RTN3P1-201ENST00000536295 OS9Q13438 667 aaPredicted RBP17.64■□□□□ 0.41
RTN3P1-201ENST00000536295 MIGA2Q7L4E1 593 aa17.64■□□□□ 0.41
RTN3P1-201ENST00000536295 FAM151AQ8WW52 585 aa17.64■□□□□ 0.41
RTN3P1-201ENST00000536295 HOOK2Q96ED9 719 aa17.64■□□□□ 0.41
RTN3P1-201ENST00000536295 WRNIP1Q96S55 665 aa17.64■□□□□ 0.41
RTN3P1-201ENST00000536295 ATP8B2P98198 1209 aa17.63■□□□□ 0.41
RTN3P1-201ENST00000536295 POLA2Q14181 598 aa17.63■□□□□ 0.41
RTN3P1-201ENST00000536295 DCAF15Q66K64 600 aa17.63■□□□□ 0.41
RTN3P1-201ENST00000536295 PI16Q6UXB8 463 aa17.63■□□□□ 0.41
RTN3P1-201ENST00000536295 ZKSCAN4Q969J2 545 aaPredicted RBP17.63■□□□□ 0.41
RTN3P1-201ENST00000536295 OTUD5Q96G74 571 aa17.63■□□□□ 0.41
RTN3P1-201ENST00000536295 CFHR5Q9BXR6 569 aa17.63■□□□□ 0.41
RTN3P1-201ENST00000536295 ZBTB7BO15156 539 aaPredicted RBP17.62■□□□□ 0.41
RTN3P1-201ENST00000536295 FKTNO75072 461 aa17.62■□□□□ 0.41
RTN3P1-201ENST00000536295 SPTY2D1Q68D10 685 aaPredicted RBP17.62■□□□□ 0.41
RTN3P1-201ENST00000536295 OTUD7BQ6GQQ9 843 aa17.62■□□□□ 0.41
RTN3P1-201ENST00000536295 PTPN18Q99952 460 aa17.62■□□□□ 0.41
RTN3P1-201ENST00000536295 HMG20BQ9P0W2 317 aa17.62■□□□□ 0.41
RTN3P1-201ENST00000536295 FAM198AQ9UFP1 575 aa17.62■□□□□ 0.41
RTN3P1-201ENST00000536295 SNCAIPQ9Y6H5 919 aa17.62■□□□□ 0.41
RTN3P1-201ENST00000536295 PDS5AQ29RF7 1337 aaKnown RBP17.62■□□□□ 0.41
RTN3P1-201ENST00000536295 RPAP1Q9BWH6 1393 aaPredicted RBP17.62■□□□□ 0.41
RTN3P1-201ENST00000536295 ZBTB22O15209 634 aa17.61■□□□□ 0.41
RTN3P1-201ENST00000536295 SURF6O75683 361 aaKnown RBP17.61■□□□□ 0.41
RTN3P1-201ENST00000536295 NOM1Q5C9Z4 860 aaKnown RBP17.61■□□□□ 0.41
RTN3P1-201ENST00000536295 ERICH6Q7L0X2 663 aa17.61■□□□□ 0.41
RTN3P1-201ENST00000536295 SPATA5Q8NB90 893 aa17.61■□□□□ 0.41
RTN3P1-201ENST00000536295 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
RTN3P1-201ENST00000536295 SSH3Q8TE77 659 aa17.61■□□□□ 0.41
RTN3P1-201ENST00000536295 ZNF341Q9BYN7 854 aa17.61■□□□□ 0.41
RTN3P1-201ENST00000536295 CCL15-CCL14A0A0B4J2E2 113 aa17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 TESPA1A2RU30 521 aaPredicted RBP17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 BTDP43251 543 aa17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 MECOMQ03112 1051 aa17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 CCL15Q16663 113 aa17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 TBC1D9Q6ZT07 1266 aa17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 ZFPM1Q8IX07 1006 aa17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 SLF2Q8IX21 1173 aa17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 BRI3BPQ8WY22 251 aa17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 MS4A4AQ96JQ5 239 aa17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 GAKO14976 1311 aa17.6■□□□□ 0.41
RTN3P1-201ENST00000536295 MYH2Q9UKX2 1941 aa17.59■□□□□ 0.41
RTN3P1-201ENST00000536295 SPDYE5A6NIY4 337 aa17.59■□□□□ 0.41
RTN3P1-201ENST00000536295 ARID4AP29374 1257 aaPredicted RBP17.59■□□□□ 0.41
RTN3P1-201ENST00000536295 INPP5BP32019 993 aa17.59■□□□□ 0.41
RTN3P1-201ENST00000536295 RGS3P49796 1198 aa17.59■□□□□ 0.41
RTN3P1-201ENST00000536295 GTF2A2P52657 109 aa17.59■□□□□ 0.41
RTN3P1-201ENST00000536295 CRHR2Q13324 411 aa17.59■□□□□ 0.41
RTN3P1-201ENST00000536295 TNNI3KQ59H18 835 aa17.59■□□□□ 0.41
RTN3P1-201ENST00000536295 FPGT-TNNI3KV9GXZ4 949 aa17.59■□□□□ 0.41
RTN3P1-201ENST00000536295 LAMB1P07942 1786 aa17.58■□□□□ 0.41
RTN3P1-201ENST00000536295 MROH7-TTC4A0A0A0MT08 1334 aa17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 MCAMP43121 646 aa17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 PICALMQ13492 652 aa17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 PKN2Q16513 984 aaKnown RBP17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 TTC39AQ5SRH9 613 aa17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 ERO1BQ86YB8 467 aa17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 ZSCAN29Q8IWY8 852 aaPredicted RBP17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 DBNDD2Q9BQY9 259 aa17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 RAI14Q9P0K7 980 aa17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 HPS5Q9UPZ3 1129 aa17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 AK9Q5TCS8 1911 aa17.58■□□□□ 0.4
RTN3P1-201ENST00000536295 IRF6O14896 467 aa17.57■□□□□ 0.4
RTN3P1-201ENST00000536295 UQCRFS1P1P0C7P4 283 aa17.57■□□□□ 0.4
RTN3P1-201ENST00000536295 SOX10P56693 466 aa17.57■□□□□ 0.4
RTN3P1-201ENST00000536295 ZNF384Q8TF68 577 aa17.57■□□□□ 0.4
RTN3P1-201ENST00000536295 FAM163AQ96GL9 167 aaPredicted RBP17.57■□□□□ 0.4
RTN3P1-201ENST00000536295 IDI2Q9BXS1 227 aa17.57■□□□□ 0.4
RTN3P1-201ENST00000536295 GPR108Q9NPR9 543 aa17.57■□□□□ 0.4
RTN3P1-201ENST00000536295 SNRKQ9NRH2 765 aa17.57■□□□□ 0.4
RTN3P1-201ENST00000536295 ENTPD3O75355 529 aa17.56■□□□□ 0.4
RTN3P1-201ENST00000536295 TAF1CQ15572 869 aaPredicted RBP17.56■□□□□ 0.4
RTN3P1-201ENST00000536295 CCDC158Q5M9N0 1113 aa17.56■□□□□ 0.4
RTN3P1-201ENST00000536295 CEP85Q6P2H3 762 aa17.56■□□□□ 0.4
RTN3P1-201ENST00000536295 FAM43AQ8N2R8 423 aa17.56■□□□□ 0.4
RTN3P1-201ENST00000536295 NSUN4Q96CB9 384 aaKnown RBP17.56■□□□□ 0.4
RTN3P1-201ENST00000536295 DDX4Q9NQI0 724 aaKnown RBP17.56■□□□□ 0.4
RTN3P1-201ENST00000536295 LRP2BPQ9P2M1 347 aa17.56■□□□□ 0.4
RTN3P1-201ENST00000536295 NOP58Q9Y2X3 529 aaKnown RBP17.56■□□□□ 0.4
RTN3P1-201ENST00000536295 GPR75-ASB3A0A0A6YYF3 556 aa17.55■□□□□ 0.4
RTN3P1-201ENST00000536295 WDHD1O75717 1129 aaPredicted RBP17.55■□□□□ 0.4
RTN3P1-201ENST00000536295 CETPP11597 493 aa17.55■□□□□ 0.4
RTN3P1-201ENST00000536295 GSTO1P78417 241 aa17.55■□□□□ 0.4
RTN3P1-201ENST00000536295 MLLT1Q03111 559 aaPredicted RBP17.55■□□□□ 0.4
RTN3P1-201ENST00000536295 PPIL2Q13356 520 aa17.55■□□□□ 0.4
RTN3P1-201ENST00000536295 SNAPC2Q13487 334 aa17.55■□□□□ 0.4
RTN3P1-201ENST00000536295 SH3BP5LQ7L8J4 393 aa17.55■□□□□ 0.4
RTN3P1-201ENST00000536295 CD99L2Q8TCZ2 262 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms