RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PARP1P09874 1014 aaKnown RBP14.21□□□□□ -0.13
SPG11-203ENST00000535302 PLEKHM2Q8IWE5 1019 aa14.21□□□□□ -0.13
SPG11-203ENST00000535302 hCG_1642624A0A1W2PR95 340 aa14.21□□□□□ -0.13
SPG11-203ENST00000535302 TRAPPC3LQ5T215 181 aa14.21□□□□□ -0.13
SPG11-203ENST00000535302 LINS1Q8NG48 757 aa14.21□□□□□ -0.13
SPG11-203ENST00000535302 LRRC45Q96CN5 670 aa14.21□□□□□ -0.13
SPG11-203ENST00000535302 HSPA1LP34931 641 aa14.21□□□□□ -0.13
SPG11-203ENST00000535302 UVSSAQ2YD98 709 aa14.21□□□□□ -0.13
SPG11-203ENST00000535302 NOP9Q86U38 636 aaKnown RBP14.21□□□□□ -0.13
SPG11-203ENST00000535302 CARD14Q9BXL6 1004 aa14.21□□□□□ -0.13
SPG11-203ENST00000535302 PDE1CQ14123 709 aaPredicted RBP14.21□□□□□ -0.14
SPG11-203ENST00000535302 IMPG2Q9BZV3 1241 aa14.21□□□□□ -0.14
SPG11-203ENST00000535302 TCP10Q12799 353 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 LGR6Q9HBX8 967 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 AATFQ9NY61 560 aaKnown RBP eCLIP14.2□□□□□ -0.14
SPG11-203ENST00000535302 UHRF1BP1LA0JNW5 1464 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 PIK3AP1Q6ZUJ8 805 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 TEX11Q8IYF3 940 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 FAM200AQ8TCP9 573 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 CCT6BQ92526 530 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 RBM17Q96I25 401 aaKnown RBP14.2□□□□□ -0.14
SPG11-203ENST00000535302 CCDC172P0C7W6 258 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 CHMLP26374 656 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 GNAQP50148 359 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 KCNA6P17658 529 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 DTHD1Q6ZMT9 781 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 CPLX4Q7Z7G2 160 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 NEK11Q8NG66 645 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 CTAGE9A4FU28 777 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 GOLGA6L9A6NEM1 432 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 CCNT1O60563 726 aaKnown RBP14.2□□□□□ -0.14
SPG11-203ENST00000535302 ATP6V0A2Q9Y487 856 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 POLD1P28340 1107 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 FMNL3Q8IVF7 1028 aa14.2□□□□□ -0.14
SPG11-203ENST00000535302 TRIM6Q9C030 488 aaPredicted RBP14.2□□□□□ -0.14
SPG11-203ENST00000535302 NSRP1Q9H0G5 558 aaKnown RBP14.2□□□□□ -0.14
SPG11-203ENST00000535302 PTPRKQ15262 1439 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 A0A1B0GUL7 405 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 XRCC6P12956 609 aaKnown RBP eCLIP14.19□□□□□ -0.14
SPG11-203ENST00000535302 CAPN2P17655 700 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 FAM173BQ6P4H8 233 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 GPATCH8Q9UKJ3 1502 aaKnown RBP14.19□□□□□ -0.14
SPG11-203ENST00000535302 A1BGP04217 495 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 KIFC2Q96AC6 838 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 TBC1D7Q9P0N9 293 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
SPG11-203ENST00000535302 VIMP08670 466 aaKnown RBP14.19□□□□□ -0.14
SPG11-203ENST00000535302 RAD51AP2Q09MP3 1159 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 ANO3Q9BYT9 981 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 A0A1W2PP64 1363 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 FLT4P35916 1363 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 USH1GQ495M9 461 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 SYT10Q6XYQ8 523 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 FAM227BQ96M60 508 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 TRIM31Q9BZY9 425 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 CCDC121Q6ZUS5 278 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 NPATQ14207 1427 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 NOL3O60936 208 aaKnown RBP14.19□□□□□ -0.14
SPG11-203ENST00000535302 MYCLP12524 364 aaPredicted RBP14.19□□□□□ -0.14
SPG11-203ENST00000535302 C10orf67Q8IYJ2 551 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 EHBP1Q8NDI1 1231 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 GTF3C6Q969F1 213 aa14.19□□□□□ -0.14
SPG11-203ENST00000535302 CCNL1Q9UK58 526 aaPredicted RBP14.19□□□□□ -0.14
SPG11-203ENST00000535302 E7EVH7 732 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 CCDC170Q8IYT3 715 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 TRIM7Q9C029 511 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 TACC1O75410 805 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 FAM98CQ17RN3 349 aaKnown RBP14.18□□□□□ -0.14
SPG11-203ENST00000535302 DHX32Q7L7V1 743 aaKnown RBP14.18□□□□□ -0.14
SPG11-203ENST00000535302 CNBD1Q8NA66 436 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 CCDC42Q96M95 316 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 DBNDD2Q9BQY9 259 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 ARFGAP3Q9NP61 516 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 GNAT2P19087 354 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 NCBP1Q09161 790 aaKnown RBP14.18□□□□□ -0.14
SPG11-203ENST00000535302 PSMB7Q99436 277 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 CCDC169A6NNP5 214 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 DIXDC1Q155Q3 683 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 PAXBP1Q9Y5B6 917 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 PCDH11XQ9BZA7 1347 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 PCDH11YQ9BZA8 1340 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 ASXL2Q76L83 1435 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 ANKS4BQ8N8V4 417 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 DCAF5Q96JK2 942 aa14.18□□□□□ -0.14
SPG11-203ENST00000535302 SLU7O95391 586 aaKnown RBP14.17□□□□□ -0.14
SPG11-203ENST00000535302 XAGE2Q96GT9 111 aa14.17□□□□□ -0.14
SPG11-203ENST00000535302 USTQ9Y2C2 406 aa14.17□□□□□ -0.14
SPG11-203ENST00000535302 TTC41PQ6P2S7 1318 aa14.17□□□□□ -0.14
SPG11-203ENST00000535302 BMP15O95972 392 aa14.17□□□□□ -0.14
SPG11-203ENST00000535302 BIRC2Q13490 618 aa14.17□□□□□ -0.14
SPG11-203ENST00000535302 ORAI2Q96SN7 254 aa14.17□□□□□ -0.14
SPG11-203ENST00000535302 VPS16Q9H269 839 aa14.17□□□□□ -0.14
SPG11-203ENST00000535302 DCTPP1Q9H773 170 aa14.17□□□□□ -0.14
SPG11-203ENST00000535302 MAP3K19Q56UN5 1328 aa14.17□□□□□ -0.14
SPG11-203ENST00000535302 USP37Q86T82 979 aa14.17□□□□□ -0.14
SPG11-203ENST00000535302 DAPK3O43293 454 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 TXKP42681 527 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 BIRC3Q13489 604 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 CEP85LQ5SZL2 805 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 CEP83Q9Y592 693 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms