RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 TESPA1A2RU30 521 aaPredicted RBP11.04□□□□□ -0.64
COPB1-211ENST00000534234 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
COPB1-211ENST00000534234 CDC42EP5Q6NZY7 148 aa11.04□□□□□ -0.64
COPB1-211ENST00000534234 MS4A4AQ96JQ5 239 aa11.04□□□□□ -0.64
COPB1-211ENST00000534234 NEUROD6Q96NK8 337 aa11.04□□□□□ -0.64
COPB1-211ENST00000534234 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
COPB1-211ENST00000534234 SALL1Q9NSC2 1324 aa11.04□□□□□ -0.64
COPB1-211ENST00000534234 A0A1B0GUL7 405 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 TCP10Q12799 353 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 MIGA2Q7L4E1 593 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 ZGPATQ8N5A5 531 aaKnown RBP11.03□□□□□ -0.64
COPB1-211ENST00000534234 FAM151AQ8WW52 585 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 ZKSCAN4Q969J2 545 aaPredicted RBP11.03□□□□□ -0.64
COPB1-211ENST00000534234 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 XAGE2Q96GT9 111 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 USP40Q9NVE5 1235 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 ZBTB22O15209 634 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 GTF2A2P52657 109 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 SOX10P56693 466 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 G3BP1Q13283 466 aaKnown RBP eCLIP11.03□□□□□ -0.642e-7■■■□□ 16.7
COPB1-211ENST00000534234 CRHR2Q13324 411 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 RASGRF1Q13972 1273 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 MVPQ14764 893 aaKnown RBP11.03□□□□□ -0.64
COPB1-211ENST00000534234 DCAF15Q66K64 600 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 FBXO46Q6PJ61 603 aaPredicted RBP11.03□□□□□ -0.64
COPB1-211ENST00000534234 TMEM57Q8N5G2 664 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 WRNIP1Q96S55 665 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 ABCF2Q9UG63 623 aa11.03□□□□□ -0.64
COPB1-211ENST00000534234 CCL15-CCL14A0A0B4J2E2 113 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 PNMA6EA0A0J9YXQ4 647 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 SPDYE5A6NIY4 337 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 NFIAQ12857 509 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 CCL15Q16663 113 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 GORABQ5T7V8 394 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 ERO1BQ86YB8 467 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 BRI3BPQ8WY22 251 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 ZNF341Q9BYN7 854 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 FAM198AQ9UFP1 575 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 SNCAIPQ9Y6H5 919 aa11.02□□□□□ -0.65
COPB1-211ENST00000534234 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.02□□□□□ -0.65
COPB1-211ENST00000534234 SPTY2D1Q68D10 685 aaPredicted RBP11.01□□□□□ -0.65
COPB1-211ENST00000534234 DZIP1Q86YF9 867 aaKnown RBP11.01□□□□□ -0.65
COPB1-211ENST00000534234 SLF2Q8IX21 1173 aa11.01□□□□□ -0.65
COPB1-211ENST00000534234 TRIM17Q9Y577 477 aa11.01□□□□□ -0.65
COPB1-211ENST00000534234 AKAP11Q9UKA4 1901 aa11□□□□□ -0.65
COPB1-211ENST00000534234 IRF6O14896 467 aa11□□□□□ -0.65
COPB1-211ENST00000534234 CETPP11597 493 aa11□□□□□ -0.65
COPB1-211ENST00000534234 INPP5BP32019 993 aa11□□□□□ -0.65
COPB1-211ENST00000534234 SP3Q02447 781 aa11□□□□□ -0.65
COPB1-211ENST00000534234 ZFPM1Q8IX07 1006 aa11□□□□□ -0.65
COPB1-211ENST00000534234 FAM163AQ96GL9 167 aaPredicted RBP11□□□□□ -0.65
COPB1-211ENST00000534234 ERO1AQ96HE7 468 aa11□□□□□ -0.65
COPB1-211ENST00000534234 ZFYVE28Q9HCC9 887 aa11□□□□□ -0.65
COPB1-211ENST00000534234 PDS5AQ29RF7 1337 aaKnown RBP11□□□□□ -0.65
COPB1-211ENST00000534234 RPAP1Q9BWH6 1393 aaPredicted RBP11□□□□□ -0.65
COPB1-211ENST00000534234 ATP8B2P98198 1209 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 PPATQ06203 517 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 PPIL2Q13356 520 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 SNAPC2Q13487 334 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 TAF1CQ15572 869 aaPredicted RBP10.99□□□□□ -0.65
COPB1-211ENST00000534234 ERICH6Q7L0X2 663 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 OTOP1Q7RTM1 612 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 FTSJ3Q8IY81 847 aaKnown RBP10.99□□□□□ -0.65
COPB1-211ENST00000534234 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 CD99L2Q8TCZ2 262 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 IDI2Q9BXS1 227 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 HMG20BQ9P0W2 317 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 ZNF112Q9UJU3 913 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 GAKO14976 1311 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 ENTPD3O75355 529 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 WDHD1O75717 1129 aaPredicted RBP10.99□□□□□ -0.65
COPB1-211ENST00000534234 RGS3P49796 1198 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 MECOMQ03112 1051 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 POLA2Q14181 598 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 TBC1D9Q6ZT07 1266 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 SPATA5Q8NB90 893 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 EFCC1Q9HA90 598 aa10.99□□□□□ -0.65
COPB1-211ENST00000534234 ECM29Q5VYK3 1845 aa10.98□□□□□ -0.65
COPB1-211ENST00000534234 ZBTB7BO15156 539 aaPredicted RBP10.98□□□□□ -0.65
COPB1-211ENST00000534234 SURF6O75683 361 aaKnown RBP10.98□□□□□ -0.65
COPB1-211ENST00000534234 LDHCP07864 332 aa10.98□□□□□ -0.65
COPB1-211ENST00000534234 BTDP43251 543 aa10.98□□□□□ -0.65
COPB1-211ENST00000534234 OS9Q13438 667 aaPredicted RBP10.98□□□□□ -0.65
COPB1-211ENST00000534234 PI16Q6UXB8 463 aa10.98□□□□□ -0.65
COPB1-211ENST00000534234 ITPRIPQ8IWB1 547 aa10.98□□□□□ -0.65
COPB1-211ENST00000534234 ZSCAN29Q8IWY8 852 aaPredicted RBP10.98□□□□□ -0.65
COPB1-211ENST00000534234 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.98□□□□□ -0.65
COPB1-211ENST00000534234 SSH3Q8TE77 659 aa10.98□□□□□ -0.65
COPB1-211ENST00000534234 C1orf115Q9H7X2 142 aa10.98□□□□□ -0.65
COPB1-211ENST00000534234 GPR75-ASB3A0A0A6YYF3 556 aa10.97□□□□□ -0.65
COPB1-211ENST00000534234 BTBD19C9JJ37 291 aa10.97□□□□□ -0.65
COPB1-211ENST00000534234 UQCRFS1P1P0C7P4 283 aa10.97□□□□□ -0.65
COPB1-211ENST00000534234 RLBP1P12271 317 aa10.97□□□□□ -0.65
COPB1-211ENST00000534234 ARID4AP29374 1257 aaPredicted RBP10.97□□□□□ -0.65
COPB1-211ENST00000534234 ARHGEF6Q15052 776 aa10.97□□□□□ -0.65
COPB1-211ENST00000534234 GPR108Q9NPR9 543 aa10.97□□□□□ -0.65
COPB1-211ENST00000534234 RAI14Q9P0K7 980 aa10.97□□□□□ -0.65
COPB1-211ENST00000534234 PTPN22Q9Y2R2 807 aa10.97□□□□□ -0.65
COPB1-211ENST00000534234 MROH7-TTC4A0A0A0MT08 1334 aa10.97□□□□□ -0.65
COPB1-211ENST00000534234 ARAP2Q8WZ64 1704 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms