RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 ELP3Q9H9T3 547 aa23.37■■□□□ 1.33
LRRK1-210ENST00000534045 POLA2Q14181 598 aa23.36■■□□□ 1.33
LRRK1-210ENST00000534045 DCAF15Q66K64 600 aa23.36■■□□□ 1.33
LRRK1-210ENST00000534045 CDC42EP5Q6NZY7 148 aa23.36■■□□□ 1.33
LRRK1-210ENST00000534045 PANK1Q8TE04 598 aa23.36■■□□□ 1.33
LRRK1-210ENST00000534045 CCDC85CA6NKD9 419 aa23.35■■□□□ 1.33
LRRK1-210ENST00000534045 ZBTB22O15209 634 aa23.35■■□□□ 1.33
LRRK1-210ENST00000534045 UQCRFS1P1P0C7P4 283 aa23.35■■□□□ 1.33
LRRK1-210ENST00000534045 TCP10Q12799 353 aa23.35■■□□□ 1.33
LRRK1-210ENST00000534045 CCDC158Q5M9N0 1113 aa23.35■■□□□ 1.33
LRRK1-210ENST00000534045 CDAN1Q8IWY9 1227 aa23.35■■□□□ 1.33
LRRK1-210ENST00000534045 FAM151AQ8WW52 585 aa23.35■■□□□ 1.33
LRRK1-210ENST00000534045 MCOLN1Q9GZU1 580 aa23.35■■□□□ 1.33
LRRK1-210ENST00000534045 SSC5DA1L4H1 1573 aa23.35■■□□□ 1.33
LRRK1-210ENST00000534045 PDS5AQ29RF7 1337 aaKnown RBP23.34■■□□□ 1.33
LRRK1-210ENST00000534045 SPATA5Q8NB90 893 aa23.34■■□□□ 1.33
LRRK1-210ENST00000534045 TTC39AQ5SRH9 613 aa23.33■■□□□ 1.33
LRRK1-210ENST00000534045 OPTNQ96CV9 577 aa23.33■■□□□ 1.33
LRRK1-210ENST00000534045 GPR108Q9NPR9 543 aa23.33■■□□□ 1.33
LRRK1-210ENST00000534045 RCAN3Q9UKA8 241 aa23.33■■□□□ 1.33
LRRK1-210ENST00000534045 OTOFQ9HC10 1997 aa23.32■■□□□ 1.32
LRRK1-210ENST00000534045 CASP8AP2Q9UKL3 1982 aa23.32■■□□□ 1.32
LRRK1-210ENST00000534045 LDHCP07864 332 aa23.32■■□□□ 1.32
LRRK1-210ENST00000534045 GSTO1P78417 241 aa23.32■■□□□ 1.32
LRRK1-210ENST00000534045 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.32■■□□□ 1.32
LRRK1-210ENST00000534045 MIGA2Q7L4E1 593 aa23.32■■□□□ 1.32
LRRK1-210ENST00000534045 IFNL1Q8IU54 200 aa23.32■■□□□ 1.32
LRRK1-210ENST00000534045 WRNIP1Q96S55 665 aa23.32■■□□□ 1.32
LRRK1-210ENST00000534045 CHMP4BQ9H444 224 aaKnown RBP23.32■■□□□ 1.32
LRRK1-210ENST00000534045 RAI14Q9P0K7 980 aa23.32■■□□□ 1.32
LRRK1-210ENST00000534045 HMG20BQ9P0W2 317 aa23.32■■□□□ 1.32
LRRK1-210ENST00000534045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.32■■□□□ 1.32
LRRK1-210ENST00000534045 VGLL4Q14135 290 aa23.31■■□□□ 1.32
LRRK1-210ENST00000534045 TNNI3KQ59H18 835 aa23.31■■□□□ 1.32
LRRK1-210ENST00000534045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.31■■□□□ 1.32
LRRK1-210ENST00000534045 ZNF341Q9BYN7 854 aa23.31■■□□□ 1.32
LRRK1-210ENST00000534045 LRP2BPQ9P2M1 347 aa23.31■■□□□ 1.32
LRRK1-210ENST00000534045 FPGT-TNNI3KV9GXZ4 949 aa23.31■■□□□ 1.32
LRRK1-210ENST00000534045 AK9Q5TCS8 1911 aa23.31■■□□□ 1.32
LRRK1-210ENST00000534045 MYH2Q9UKX2 1941 aa23.3■■□□□ 1.32
LRRK1-210ENST00000534045 GPR25O00155 361 aa23.3■■□□□ 1.32
LRRK1-210ENST00000534045 ZSCAN29Q8IWY8 852 aaPredicted RBP23.3■■□□□ 1.32
LRRK1-210ENST00000534045 NOP58Q9Y2X3 529 aaKnown RBP23.3■■□□□ 1.32
LRRK1-210ENST00000534045 ARID4AP29374 1257 aaPredicted RBP23.29■■□□□ 1.32
LRRK1-210ENST00000534045 GTF2A2P52657 109 aa23.29■■□□□ 1.32
LRRK1-210ENST00000534045 MECOMQ03112 1051 aa23.29■■□□□ 1.32
LRRK1-210ENST00000534045 NFIAQ12857 509 aa23.29■■□□□ 1.32
LRRK1-210ENST00000534045 CEP85Q6P2H3 762 aa23.29■■□□□ 1.32
LRRK1-210ENST00000534045 CTU1Q7Z7A3 348 aaKnown RBP23.29■■□□□ 1.32
LRRK1-210ENST00000534045 ZNF296Q8WUU4 475 aaPredicted RBP23.29■■□□□ 1.32
LRRK1-210ENST00000534045 OTUD5Q96G74 571 aa23.29■■□□□ 1.32
LRRK1-210ENST00000534045 FAM163AQ96GL9 167 aaPredicted RBP23.29■■□□□ 1.32
LRRK1-210ENST00000534045 NOL10Q9BSC4 688 aaKnown RBP23.29■■□□□ 1.32
LRRK1-210ENST00000534045 DDX19BQ9UMR2 479 aa23.29■■□□□ 1.32
LRRK1-210ENST00000534045 LAMB1P07942 1786 aa23.29■■□□□ 1.32
LRRK1-210ENST00000534045 FKTNO75072 461 aa23.28■■□□□ 1.32
LRRK1-210ENST00000534045 BTDP43251 543 aa23.28■■□□□ 1.32
LRRK1-210ENST00000534045 HSP90AB4PQ58FF6 505 aa23.28■■□□□ 1.32
LRRK1-210ENST00000534045 TBC1D9Q6ZT07 1266 aa23.28■■□□□ 1.32
LRRK1-210ENST00000534045 ERC1Q8IUD2 1116 aa23.28■■□□□ 1.32
LRRK1-210ENST00000534045 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.28■■□□□ 1.32
LRRK1-210ENST00000534045 ZKSCAN4Q969J2 545 aaPredicted RBP23.28■■□□□ 1.32
LRRK1-210ENST00000534045 WDHD1O75717 1129 aaPredicted RBP23.27■■□□□ 1.32
LRRK1-210ENST00000534045 GJA5P36382 358 aa23.27■■□□□ 1.32
LRRK1-210ENST00000534045 PI16Q6UXB8 463 aa23.27■■□□□ 1.32
LRRK1-210ENST00000534045 ERO1BQ86YB8 467 aa23.27■■□□□ 1.32
LRRK1-210ENST00000534045 DBNDD2Q9BQY9 259 aa23.27■■□□□ 1.32
LRRK1-210ENST00000534045 FAM198AQ9UFP1 575 aa23.27■■□□□ 1.32
LRRK1-210ENST00000534045 COG6Q9Y2V7 657 aa23.27■■□□□ 1.32
LRRK1-210ENST00000534045 GAKO14976 1311 aa23.27■■□□□ 1.32
LRRK1-210ENST00000534045 RPAP1Q9BWH6 1393 aaPredicted RBP23.27■■□□□ 1.31
LRRK1-210ENST00000534045 ENTPD3O75355 529 aa23.26■■□□□ 1.31
LRRK1-210ENST00000534045 MCAMP43121 646 aa23.26■■□□□ 1.31
LRRK1-210ENST00000534045 RGS3P49796 1198 aa23.26■■□□□ 1.31
LRRK1-210ENST00000534045 NOM1Q5C9Z4 860 aaKnown RBP23.26■■□□□ 1.31
LRRK1-210ENST00000534045 CFHR5Q9BXR6 569 aa23.26■■□□□ 1.31
LRRK1-210ENST00000534045 SNRKQ9NRH2 765 aa23.26■■□□□ 1.31
LRRK1-210ENST00000534045 MROH7-TTC4A0A0A0MT08 1334 aa23.26■■□□□ 1.31
LRRK1-210ENST00000534045 CCL15-CCL14A0A0B4J2E2 113 aa23.25■■□□□ 1.31
LRRK1-210ENST00000534045 IGF2BP3O00425 579 aaKnown RBP eCLIP23.25■■□□□ 1.31
LRRK1-210ENST00000534045 HMMRO75330 724 aa23.25■■□□□ 1.31
LRRK1-210ENST00000534045 PICALMQ13492 652 aa23.25■■□□□ 1.31
LRRK1-210ENST00000534045 PKN2Q16513 984 aaKnown RBP23.25■■□□□ 1.31
LRRK1-210ENST00000534045 CCL15Q16663 113 aa23.25■■□□□ 1.31
LRRK1-210ENST00000534045 RPAP2Q8IXW5 612 aaPredicted RBP23.25■■□□□ 1.31
LRRK1-210ENST00000534045 CNKSR2Q8WXI2 1034 aa23.25■■□□□ 1.31
LRRK1-210ENST00000534045 IDI2Q9BXS1 227 aa23.25■■□□□ 1.31
LRRK1-210ENST00000534045 CCDC8Q9H0W5 538 aaPredicted RBP23.25■■□□□ 1.31
LRRK1-210ENST00000534045 GPR75-ASB3A0A0A6YYF3 556 aa23.24■■□□□ 1.31
LRRK1-210ENST00000534045 SPDYE5A6NIY4 337 aa23.24■■□□□ 1.31
LRRK1-210ENST00000534045 EXOC6BQ9Y2D4 811 aa23.24■■□□□ 1.31
LRRK1-210ENST00000534045 TESPA1A2RU30 521 aaPredicted RBP23.23■■□□□ 1.31
LRRK1-210ENST00000534045 CETPP11597 493 aa23.23■■□□□ 1.31
LRRK1-210ENST00000534045 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
LRRK1-210ENST00000534045 NSUN4Q96CB9 384 aaKnown RBP23.23■■□□□ 1.31
LRRK1-210ENST00000534045 SNCAIPQ9Y6H5 919 aa23.23■■□□□ 1.31
LRRK1-210ENST00000534045 BAG3O95817 575 aa23.22■■□□□ 1.31
LRRK1-210ENST00000534045 MAP4K4O95819 1239 aaPredicted RBP23.22■■□□□ 1.31
LRRK1-210ENST00000534045 INPP5BP32019 993 aa23.22■■□□□ 1.31
LRRK1-210ENST00000534045 SNAPC2Q13487 334 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms