RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 MAP3K9P80192 1104 aa14.03□□□□□ -0.16
CLCF1-202ENST00000533438 VGLL4Q14135 290 aa14.03□□□□□ -0.16
CLCF1-202ENST00000533438 CLUAP1Q96AJ1 413 aa14.03□□□□□ -0.16
CLCF1-202ENST00000533438 OPTNQ96CV9 577 aa14.03□□□□□ -0.16
CLCF1-202ENST00000533438 MS4A4AQ96JQ5 239 aa14.03□□□□□ -0.16
CLCF1-202ENST00000533438 PTPN18Q99952 460 aa14.03□□□□□ -0.16
CLCF1-202ENST00000533438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.03□□□□□ -0.16
CLCF1-202ENST00000533438 AK9Q5TCS8 1911 aa14.03□□□□□ -0.16
CLCF1-202ENST00000533438 PDS5AQ29RF7 1337 aaKnown RBP14.02□□□□□ -0.17
CLCF1-202ENST00000533438 A0A1B0GUL7 405 aa14.02□□□□□ -0.17
CLCF1-202ENST00000533438 GNAI2P04899 355 aa14.02□□□□□ -0.17
CLCF1-202ENST00000533438 LDHBP07195 334 aaKnown RBP14.02□□□□□ -0.17
CLCF1-202ENST00000533438 TFCP2Q12800 502 aa14.02□□□□□ -0.17
CLCF1-202ENST00000533438 DIXDC1Q155Q3 683 aa14.02□□□□□ -0.17
CLCF1-202ENST00000533438 ZKSCAN2Q63HK3 967 aa14.02□□□□□ -0.17
CLCF1-202ENST00000533438 CNKSR2Q8WXI2 1034 aa14.02□□□□□ -0.17
CLCF1-202ENST00000533438 MKI67P46013 3256 aaKnown RBP14.02□□□□□ -0.17
CLCF1-202ENST00000533438 DOCK2Q92608 1830 aa14.01□□□□□ -0.17
CLCF1-202ENST00000533438 PNMA6EA0A0J9YXQ4 647 aa14.01□□□□□ -0.17
CLCF1-202ENST00000533438 RASGRF1Q13972 1273 aa14.01□□□□□ -0.17
CLCF1-202ENST00000533438 CDC42EP5Q6NZY7 148 aa14.01□□□□□ -0.17
CLCF1-202ENST00000533438 TMEM57Q8N5G2 664 aa14.01□□□□□ -0.17
CLCF1-202ENST00000533438 FAM151AQ8WW52 585 aa14.01□□□□□ -0.17
CLCF1-202ENST00000533438 GCC1Q96CN9 775 aa14.01□□□□□ -0.17
CLCF1-202ENST00000533438 HOOK2Q96ED9 719 aa14.01□□□□□ -0.17
CLCF1-202ENST00000533438 AKAP2Q9Y2D5 859 aa14.01□□□□□ -0.17
CLCF1-202ENST00000533438 SNCAIPQ9Y6H5 919 aa14.01□□□□□ -0.17
CLCF1-202ENST00000533438 OTUD7BQ6GQQ9 843 aa14□□□□□ -0.17
CLCF1-202ENST00000533438 ZGPATQ8N5A5 531 aaKnown RBP14□□□□□ -0.17
CLCF1-202ENST00000533438 XAGE2Q96GT9 111 aa14□□□□□ -0.17
CLCF1-202ENST00000533438 CSADQ9Y600 493 aa14□□□□□ -0.17
CLCF1-202ENST00000533438 RFX7Q2KHR2 1363 aa13.99□□□□□ -0.17
CLCF1-202ENST00000533438 GAKO14976 1311 aa13.99□□□□□ -0.17
CLCF1-202ENST00000533438 SPDYE5A6NIY4 337 aa13.99□□□□□ -0.17
CLCF1-202ENST00000533438 GTF2A2P52657 109 aa13.99□□□□□ -0.17
CLCF1-202ENST00000533438 NFIAQ12857 509 aa13.99□□□□□ -0.17
CLCF1-202ENST00000533438 CRHR2Q13324 411 aa13.99□□□□□ -0.17
CLCF1-202ENST00000533438 MVPQ14764 893 aaKnown RBP13.99□□□□□ -0.17
CLCF1-202ENST00000533438 OTUD5Q96G74 571 aa13.99□□□□□ -0.17
CLCF1-202ENST00000533438 WRNIP1Q96S55 665 aa13.99□□□□□ -0.17
CLCF1-202ENST00000533438 FAM198AQ9UFP1 575 aa13.99□□□□□ -0.17
CLCF1-202ENST00000533438 POLA2Q14181 598 aa13.98□□□□□ -0.17
CLCF1-202ENST00000533438 DCAF15Q66K64 600 aa13.98□□□□□ -0.17
CLCF1-202ENST00000533438 ERO1BQ86YB8 467 aa13.98□□□□□ -0.17
CLCF1-202ENST00000533438 BRI3BPQ8WY22 251 aa13.98□□□□□ -0.17
CLCF1-202ENST00000533438 ZKSCAN4Q969J2 545 aaPredicted RBP13.98□□□□□ -0.17
CLCF1-202ENST00000533438 FAM163AQ96GL9 167 aaPredicted RBP13.98□□□□□ -0.17
CLCF1-202ENST00000533438 ZNF341Q9BYN7 854 aa13.98□□□□□ -0.17
CLCF1-202ENST00000533438 USP40Q9NVE5 1235 aa13.98□□□□□ -0.17
CLCF1-202ENST00000533438 ZNF112Q9UJU3 913 aa13.98□□□□□ -0.17
CLCF1-202ENST00000533438 CENPFP49454 3210 aa13.97□□□□□ -0.17
CLCF1-202ENST00000533438 CCL15-CCL14A0A0B4J2E2 113 aa13.97□□□□□ -0.17
CLCF1-202ENST00000533438 CENPBP07199 599 aaPredicted RBP13.97□□□□□ -0.17
CLCF1-202ENST00000533438 ARID4AP29374 1257 aaPredicted RBP13.97□□□□□ -0.17
CLCF1-202ENST00000533438 TCP10Q12799 353 aa13.97□□□□□ -0.17
CLCF1-202ENST00000533438 CCL15Q16663 113 aa13.97□□□□□ -0.17
CLCF1-202ENST00000533438 MIGA2Q7L4E1 593 aa13.97□□□□□ -0.17
CLCF1-202ENST00000533438 IDI2Q9BXS1 227 aa13.97□□□□□ -0.17
CLCF1-202ENST00000533438 ATRNL1Q5VV63 1379 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 IRF6O14896 467 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 RLBP1P12271 317 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 INPP5BP32019 993 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 ATP8B2P98198 1209 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 G3BP1Q13283 466 aaKnown RBP eCLIP13.96□□□□□ -0.17
CLCF1-202ENST00000533438 SPTY2D1Q68D10 685 aaPredicted RBP13.96□□□□□ -0.17
CLCF1-202ENST00000533438 OTOP1Q7RTM1 612 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 DZIP1Q86YF9 867 aaKnown RBP13.96□□□□□ -0.17
CLCF1-202ENST00000533438 ZFPM1Q8IX07 1006 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 FAM43AQ8N2R8 423 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 SSH3Q8TE77 659 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 ZNF384Q8TF68 577 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 NEUROD6Q96NK8 337 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 HMG20BQ9P0W2 317 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 ABCF2Q9UG63 623 aa13.96□□□□□ -0.17
CLCF1-202ENST00000533438 MROH7-TTC4A0A0A0MT08 1334 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
CLCF1-202ENST00000533438 ENTPD3O75355 529 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 CAP1Q01518 475 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 SP3Q02447 781 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 MECOMQ03112 1051 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 PPATQ06203 517 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 PPIL2Q13356 520 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 NOL9Q5SY16 702 aaKnown RBP13.95□□□□□ -0.18
CLCF1-202ENST00000533438 PI16Q6UXB8 463 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 SLF2Q8IX21 1173 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 SPATA5Q8NB90 893 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 CD99L2Q8TCZ2 262 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 ARMC5Q96C12 935 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 ERO1AQ96HE7 468 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 TRIM17Q9Y577 477 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 MAST2Q6P0Q8 1798 aa13.95□□□□□ -0.18
CLCF1-202ENST00000533438 MYO5AQ9Y4I1 1855 aaKnown RBP13.95□□□□□ -0.18
CLCF1-202ENST00000533438 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 WDHD1O75717 1129 aaPredicted RBP13.94□□□□□ -0.18
CLCF1-202ENST00000533438 CETPP11597 493 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 MCAMP43121 646 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 BTDP43251 543 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 RGS3P49796 1198 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 SNAPC2Q13487 334 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms