RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 LOC102724428A0A0B4J2F2 783 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 SIK1P57059 783 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 SIM2Q14190 667 aaPredicted RBP6.31□□□□□ -1.4
CKAP5-212ENST00000533413 ODR4Q5SWX8 454 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 LARP1BQ659C4 914 aaKnown RBP6.31□□□□□ -1.4
CKAP5-212ENST00000533413 PTF1AQ7RTS3 328 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 TTC5Q8N0Z6 440 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 TIGD1Q96MW7 591 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 ESYT1Q9BSJ8 1104 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 REPIN1Q9BWE0 567 aaKnown RBP6.31□□□□□ -1.4
CKAP5-212ENST00000533413 IP6K2Q9UHH9 426 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 GNEQ9Y223 722 aaKnown RBP6.31□□□□□ -1.4
CKAP5-212ENST00000533413 SCN7AQ01118 1682 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 BCORQ6W2J9 1755 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 CCDC66A2RUB6 948 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 GNAI2P04899 355 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 CCT4P50991 539 aaKnown RBP6.3□□□□□ -1.4
CKAP5-212ENST00000533413 ZBED6P86452 979 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 RAD51AP2Q09MP3 1159 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 CUL4AQ13619 759 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 IER2Q9BTL4 223 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 OSBPL3Q9H4L5 887 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 INTUQ9ULD6 942 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 KIF3AQ9Y496 699 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 TIMM44O43615 452 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 SERPINB4P48594 390 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 CHAF1AQ13111 956 aaPredicted RBP6.3□□□□□ -1.4
CKAP5-212ENST00000533413 UBE4AQ14139 1066 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 CCDC92Q53HC0 331 aaPredicted RBP6.3□□□□□ -1.4
CKAP5-212ENST00000533413 USP48Q86UV5 1035 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 PAF1Q8N7H5 531 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 NFATC2IPQ8NCF5 419 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 AGBL1Q96MI9 1066 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.3□□□□□ -1.4
CKAP5-212ENST00000533413 PPCSQ9HAB8 311 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 SPTLC3Q9NUV7 552 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 POLR3EQ9NVU0 708 aa6.3□□□□□ -1.4
CKAP5-212ENST00000533413 CBFA2T2O43439 604 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 ATG7O95352 703 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 TAF7Q15545 349 aaPredicted RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 KRT24Q2M2I5 525 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 CCDC93Q567U6 631 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 CCDC183Q5T5S1 534 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 PHLDB3Q6NSJ2 640 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 DRC7Q8IY82 874 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 IL17REQ8NFR9 667 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 CCDC47Q96A33 483 aaKnown RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 NAP1L4Q99733 375 aaKnown RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 LRRCC1Q9C099 1032 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 HEG1Q9ULI3 1381 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 CHL1O00533 1208 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 MPHOSPH10O00566 681 aaKnown RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 PPP1R12AO14974 1030 aaPredicted RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 DNAJA1P31689 397 aaKnown RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 ATP6V1AP38606 617 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 NOP2P46087 812 aaKnown RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 NOLC1Q14978 699 aaKnown RBP eCLIP6.29□□□□□ -1.41e-323■■■□□ 18.1
CKAP5-212ENST00000533413 FMNL2Q96PY5 1086 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 EPAS1Q99814 870 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 STK31Q9BXU1 1019 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 LGR6Q9HBX8 967 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 LRRC4BQ9NT99 713 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 USP25Q9UHP3 1055 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 ASAP1Q9ULH1 1129 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 EXOC6BQ9Y2D4 811 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 ATP6V1DQ9Y5K8 247 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 SOS1Q07889 1333 aaPredicted RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 BTBD11A6QL63 1104 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 ADCY5O95622 1261 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 MX1P20591 662 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 KCNJ4P48050 445 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 ZNF790Q6PG37 636 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 POTEHQ6S545 545 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 MCM10Q7L590 875 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 PIBF1Q8WXW3 757 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 SLC39A13Q96H72 371 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 UPF3BQ9BZI7 483 aaKnown RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 SRCIN1Q9C0H9 1055 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 CD248Q9HCU0 757 aa6.29□□□□□ -1.4
CKAP5-212ENST00000533413 CWC25Q9NXE8 425 aaPredicted RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 MORC2Q9Y6X9 1032 aaPredicted RBP6.29□□□□□ -1.4
CKAP5-212ENST00000533413 ATP10DQ9P241 1426 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 GADD45BO75293 160 aaPredicted RBP6.28□□□□□ -1.4
CKAP5-212ENST00000533413 GNAI3P08754 354 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 CHMLP26374 656 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 MARSP56192 900 aaKnown RBP6.28□□□□□ -1.4
CKAP5-212ENST00000533413 AMPD3Q01432 767 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 R3HDM1Q15032 1099 aaKnown RBP6.28□□□□□ -1.4
CKAP5-212ENST00000533413 TSHZ3Q63HK5 1081 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 PCGF5Q86SE9 256 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 TSC1Q92574 1164 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 MTFR1LQ9H019 292 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 IFT122Q9HBG6 1241 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 KIF13BQ9NQT8 1826 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 A0A087WZG4 1122 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 GOLGA6L6A8MZA4 724 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 STARD3NLO95772 234 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 TPM3P06753 285 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 MECOMQ03112 1051 aa6.28□□□□□ -1.4
CKAP5-212ENST00000533413 C16orf87Q6PH81 154 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms