RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ANKRD13AQ8IZ07 590 aa37.26■■■■□ 3.56
SSSCA1-207ENST00000533115 ZBTB40Q9NUA8 1239 aa37.26■■■■□ 3.56
SSSCA1-207ENST00000533115 ZBTB4Q9P1Z0 1013 aaPredicted RBP37.26■■■■□ 3.56
SSSCA1-207ENST00000533115 PI16Q6UXB8 463 aa37.25■■■■□ 3.55
SSSCA1-207ENST00000533115 GOLGA6L2Q8N9W4 650 aaPredicted RBP37.25■■■■□ 3.55
SSSCA1-207ENST00000533115 DBNDD2Q9BQY9 259 aa37.25■■■■□ 3.55
SSSCA1-207ENST00000533115 MCAMP43121 646 aa37.24■■■■□ 3.55
SSSCA1-207ENST00000533115 TM4SF4P48230 202 aa37.24■■■■□ 3.55
SSSCA1-207ENST00000533115 ERICH6Q7L0X2 663 aa37.24■■■■□ 3.55
SSSCA1-207ENST00000533115 SLF2Q8IX21 1173 aa37.24■■■■□ 3.55
SSSCA1-207ENST00000533115 CHMP4BQ9H444 224 aaKnown RBP37.24■■■■□ 3.55
SSSCA1-207ENST00000533115 USP40Q9NVE5 1235 aa37.24■■■■□ 3.55
SSSCA1-207ENST00000533115 GAKO14976 1311 aa37.24■■■■□ 3.55
SSSCA1-207ENST00000533115 MYH2Q9UKX2 1941 aa37.24■■■■□ 3.55
SSSCA1-207ENST00000533115 CCDC158Q5M9N0 1113 aa37.23■■■■□ 3.55
SSSCA1-207ENST00000533115 RPAP2Q8IXW5 612 aaPredicted RBP37.23■■■■□ 3.55
SSSCA1-207ENST00000533115 RPAP1Q9BWH6 1393 aaPredicted RBP37.22■■■■□ 3.55
SSSCA1-207ENST00000533115 SREBF2Q12772 1141 aa37.22■■■■□ 3.55
SSSCA1-207ENST00000533115 PDE3AQ14432 1141 aa37.22■■■■□ 3.55
SSSCA1-207ENST00000533115 TTC39AQ5SRH9 613 aa37.22■■■■□ 3.55
SSSCA1-207ENST00000533115 FAM151AQ8WW52 585 aa37.22■■■■□ 3.55
SSSCA1-207ENST00000533115 FAM163AQ96GL9 167 aaPredicted RBP37.22■■■■□ 3.55
SSSCA1-207ENST00000533115 WNK4Q96J92 1243 aa37.22■■■■□ 3.55
SSSCA1-207ENST00000533115 EXOC6BQ9Y2D4 811 aa37.22■■■■□ 3.55
SSSCA1-207ENST00000533115 ZBTB48P10074 688 aaPredicted RBP37.21■■■■□ 3.55
SSSCA1-207ENST00000533115 HOOK2Q96ED9 719 aa37.21■■■■□ 3.55
SSSCA1-207ENST00000533115 MECOMQ03112 1051 aa37.2■■■■□ 3.55
SSSCA1-207ENST00000533115 NFIAQ12857 509 aa37.2■■■■□ 3.55
SSSCA1-207ENST00000533115 C20orf194Q5TEA3 1177 aa37.2■■■■□ 3.55
SSSCA1-207ENST00000533115 TBC1D9Q6ZT07 1266 aa37.2■■■■□ 3.55
SSSCA1-207ENST00000533115 ERC1Q8IUD2 1116 aa37.2■■■■□ 3.55
SSSCA1-207ENST00000533115 OTOFQ9HC10 1997 aa37.2■■■■□ 3.55
SSSCA1-207ENST00000533115 MAP3K9P80192 1104 aa37.18■■■■□ 3.54
SSSCA1-207ENST00000533115 TCP10Q12799 353 aa37.18■■■■□ 3.54
SSSCA1-207ENST00000533115 HSP90AB4PQ58FF6 505 aa37.18■■■■□ 3.54
SSSCA1-207ENST00000533115 PPP1R3FQ6ZSY5 799 aaPredicted RBP37.18■■■■□ 3.54
SSSCA1-207ENST00000533115 DDX55Q8NHQ9 600 aaKnown RBP eCLIP37.18■■■■□ 3.54
SSSCA1-207ENST00000533115 EAF2Q96CJ1 260 aaPredicted RBP37.18■■■■□ 3.54
SSSCA1-207ENST00000533115 DBNLQ9UJU6 430 aaKnown RBP37.18■■■■□ 3.54
SSSCA1-207ENST00000533115 CASP8AP2Q9UKL3 1982 aa37.18■■■■□ 3.54
SSSCA1-207ENST00000533115 MROH7-TTC4A0A0A0MT08 1334 aa37.17■■■■□ 3.54
SSSCA1-207ENST00000533115 ZNF384Q8TF68 577 aa37.17■■■■□ 3.54
SSSCA1-207ENST00000533115 ZNF512BQ96KM6 892 aaPredicted RBP37.17■■■■□ 3.54
SSSCA1-207ENST00000533115 CCDC8Q9H0W5 538 aaPredicted RBP37.17■■■■□ 3.54
SSSCA1-207ENST00000533115 ELP3Q9H9T3 547 aa37.17■■■■□ 3.54
SSSCA1-207ENST00000533115 FAM198AQ9UFP1 575 aa37.17■■■■□ 3.54
SSSCA1-207ENST00000533115 MANSC4A6NHS7 340 aaPredicted RBP37.16■■■■□ 3.54
SSSCA1-207ENST00000533115 HMMRO75330 724 aa37.16■■■■□ 3.54
SSSCA1-207ENST00000533115 NSUN4Q96CB9 384 aaKnown RBP37.16■■■■□ 3.54
SSSCA1-207ENST00000533115 SNRKQ9NRH2 765 aa37.16■■■■□ 3.54
SSSCA1-207ENST00000533115 TLR7Q9NYK1 1049 aaKnown RBP37.16■■■■□ 3.54
SSSCA1-207ENST00000533115 BTDP43251 543 aa37.15■■■■□ 3.54
SSSCA1-207ENST00000533115 GSTO1P78417 241 aa37.15■■■■□ 3.54
SSSCA1-207ENST00000533115 DCAF15Q66K64 600 aa37.15■■■■□ 3.54
SSSCA1-207ENST00000533115 SIRT2Q8IXJ6 389 aa37.15■■■■□ 3.54
SSSCA1-207ENST00000533115 IDI2Q9BXS1 227 aa37.15■■■■□ 3.54
SSSCA1-207ENST00000533115 RAI14Q9P0K7 980 aa37.15■■■■□ 3.54
SSSCA1-207ENST00000533115 GJA5P36382 358 aa37.14■■■■□ 3.54
SSSCA1-207ENST00000533115 INHBEP58166 350 aa37.14■■■■□ 3.54
SSSCA1-207ENST00000533115 VGLL4Q14135 290 aa37.14■■■■□ 3.54
SSSCA1-207ENST00000533115 LRP2BPQ9P2M1 347 aa37.14■■■■□ 3.54
SSSCA1-207ENST00000533115 CSADQ9Y600 493 aa37.14■■■■□ 3.54
SSSCA1-207ENST00000533115 GPR75-ASB3A0A0A6YYF3 556 aa37.13■■■■□ 3.53
SSSCA1-207ENST00000533115 LDHCP07864 332 aa37.13■■■■□ 3.53
SSSCA1-207ENST00000533115 OPTNQ96CV9 577 aa37.12■■■■□ 3.53
SSSCA1-207ENST00000533115 ENTPD3O75355 529 aa37.11■■■■□ 3.53
SSSCA1-207ENST00000533115 RGS3P49796 1198 aa37.11■■■■□ 3.53
SSSCA1-207ENST00000533115 MIGA2Q7L4E1 593 aa37.11■■■■□ 3.53
SSSCA1-207ENST00000533115 ZFPM1Q8IX07 1006 aa37.11■■■■□ 3.53
SSSCA1-207ENST00000533115 RHPN1Q8TCX5 695 aa37.11■■■■□ 3.53
SSSCA1-207ENST00000533115 WRNIP1Q96S55 665 aa37.11■■■■□ 3.53
SSSCA1-207ENST00000533115 ZNF341Q9BYN7 854 aa37.11■■■■□ 3.53
SSSCA1-207ENST00000533115 LAMB1P07942 1786 aa37.11■■■■□ 3.53
SSSCA1-207ENST00000533115 RFX7Q2KHR2 1363 aa37.1■■■■□ 3.53
SSSCA1-207ENST00000533115 AACSQ86V21 672 aa37.1■■■■□ 3.53
SSSCA1-207ENST00000533115 AK9Q5TCS8 1911 aa37.09■■■■□ 3.53
SSSCA1-207ENST00000533115 CAPN15O75808 1086 aa37.09■■■■□ 3.53
SSSCA1-207ENST00000533115 TBC1D8O95759 1140 aa37.09■■■■□ 3.53
SSSCA1-207ENST00000533115 CYP2E1P05181 493 aaPredicted RBP37.09■■■■□ 3.53
SSSCA1-207ENST00000533115 WDHD1O75717 1129 aaPredicted RBP37.08■■■■□ 3.53
SSSCA1-207ENST00000533115 ZAP70P43403 619 aa37.08■■■■□ 3.53
SSSCA1-207ENST00000533115 IFNL1Q8IU54 200 aa37.08■■■■□ 3.53
SSSCA1-207ENST00000533115 IL1RAPL2Q9NP60 686 aa37.08■■■■□ 3.53
SSSCA1-207ENST00000533115 ALDH1A1P00352 501 aa37.07■■■■□ 3.52
SSSCA1-207ENST00000533115 RHBDL3P58872 404 aa37.07■■■■□ 3.52
SSSCA1-207ENST00000533115 CNKSR2Q8WXI2 1034 aa37.07■■■■□ 3.52
SSSCA1-207ENST00000533115 ZKSCAN4Q969J2 545 aaPredicted RBP37.07■■■■□ 3.52
SSSCA1-207ENST00000533115 KIF1BPQ96EK5 621 aa37.07■■■■□ 3.52
SSSCA1-207ENST00000533115 SNCAIPQ9Y6H5 919 aa37.07■■■■□ 3.52
SSSCA1-207ENST00000533115 CFHR5Q9BXR6 569 aa37.06■■■■□ 3.52
SSSCA1-207ENST00000533115 DDX4Q9NQI0 724 aaKnown RBP37.06■■■■□ 3.52
SSSCA1-207ENST00000533115 APBB1O00213 710 aa37.05■■■■□ 3.52
SSSCA1-207ENST00000533115 MAP4K4O95819 1239 aaPredicted RBP37.05■■■■□ 3.52
SSSCA1-207ENST00000533115 RAB11FIP3O75154 756 aa37.04■■■■□ 3.52
SSSCA1-207ENST00000533115 PICALMQ13492 652 aa37.04■■■■□ 3.52
SSSCA1-207ENST00000533115 ZNF112Q9UJU3 913 aa37.04■■■■□ 3.52
SSSCA1-207ENST00000533115 TESPA1A2RU30 521 aaPredicted RBP37.03■■■■□ 3.52
SSSCA1-207ENST00000533115 SPDYE5A6NIY4 337 aa37.03■■■■□ 3.52
SSSCA1-207ENST00000533115 IGF2BP3O00425 579 aaKnown RBP eCLIP37.03■■■■□ 3.52
SSSCA1-207ENST00000533115 IGSF3O75054 1194 aa37.03■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms