RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 FANCIQ9NVI1 1328 aa15.7■□□□□ 0.1
CAPN1-223ENST00000533079 LAMA3Q16787 3333 aa15.7■□□□□ 0.1
CAPN1-223ENST00000533079 TRIOBPQ9H2D6 2365 aa15.7■□□□□ 0.1
CAPN1-223ENST00000533079 COL6A3P12111 3177 aa15.7■□□□□ 0.1
CAPN1-223ENST00000533079 PDHXO00330 501 aa15.7■□□□□ 0.1
CAPN1-223ENST00000533079 FMNL1O95466 1100 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-223ENST00000533079 CTGFP29279 349 aa15.7■□□□□ 0.1
CAPN1-223ENST00000533079 EPHA10Q5JZY3 1008 aa15.7■□□□□ 0.1
CAPN1-223ENST00000533079 FBXO33Q7Z6M2 555 aa15.7■□□□□ 0.1
CAPN1-223ENST00000533079 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-223ENST00000533079 RNF208Q9H0X6 261 aa15.7■□□□□ 0.1
CAPN1-223ENST00000533079 CPA4Q9UI42 421 aa15.7■□□□□ 0.1
CAPN1-223ENST00000533079 DLL1O00548 723 aa15.69■□□□□ 0.1
CAPN1-223ENST00000533079 ZBTB7BO15156 539 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-223ENST00000533079 FRAT2O75474 233 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-223ENST00000533079 FARP2O94887 1054 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-223ENST00000533079 CACNB3P54284 484 aa15.69■□□□□ 0.1
CAPN1-223ENST00000533079 FCGRTP55899 365 aa15.69■□□□□ 0.1
CAPN1-223ENST00000533079 SLC17A8Q8NDX2 589 aa15.69■□□□□ 0.1
CAPN1-223ENST00000533079 U2AF1L4Q8WU68 220 aaKnown RBP15.69■□□□□ 0.1
CAPN1-223ENST00000533079 C9orf78Q9NZ63 289 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-223ENST00000533079 ALDH1L1O75891 902 aa15.68■□□□□ 0.1
CAPN1-223ENST00000533079 NOL9Q5SY16 702 aaKnown RBP15.68■□□□□ 0.1
CAPN1-223ENST00000533079 APOBEC3HQ6NTF7 200 aaKnown RBP15.68■□□□□ 0.1
CAPN1-223ENST00000533079 HHIPL2Q6UWX4 724 aa15.68■□□□□ 0.1
CAPN1-223ENST00000533079 ZNF112Q9UJU3 913 aa15.68■□□□□ 0.1
CAPN1-223ENST00000533079 CEP290O15078 2479 aa15.68■□□□□ 0.1
CAPN1-223ENST00000533079 MGAMO43451 1857 aa15.67■□□□□ 0.1
CAPN1-223ENST00000533079 F6X3S4 739 aa15.67■□□□□ 0.1
CAPN1-223ENST00000533079 VAMP4O75379 141 aa15.67■□□□□ 0.1
CAPN1-223ENST00000533079 PRKCZQ05513 592 aa15.67■□□□□ 0.1
CAPN1-223ENST00000533079 CHAF1AQ13111 956 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-223ENST00000533079 GRIK5Q16478 980 aa15.67■□□□□ 0.1
CAPN1-223ENST00000533079 FAM151AQ8WW52 585 aa15.67■□□□□ 0.1
CAPN1-223ENST00000533079 BIN2Q9UBW5 565 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-223ENST00000533079 BCRP11274 1271 aa15.66■□□□□ 0.1
CAPN1-223ENST00000533079 INPP5BP32019 993 aa15.66■□□□□ 0.1
CAPN1-223ENST00000533079 GPR153Q6NV75 609 aa15.66■□□□□ 0.1
CAPN1-223ENST00000533079 MYH13Q9UKX3 1938 aa15.66■□□□□ 0.1
CAPN1-223ENST00000533079 CXCL11O14625 94 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 EVI5O60447 810 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 PDE8BO95263 885 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 SGPL1O95470 568 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 MOGSQ13724 837 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 VGLL2Q8N8G2 317 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 PXYLP1Q8TE99 480 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 PUS3Q9BZE2 481 aaKnown RBP15.65■□□□□ 0.1
CAPN1-223ENST00000533079 SRCIN1Q9C0H9 1055 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 IQSEC3Q9UPP2 1182 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-223ENST00000533079 SLC45A1Q9Y2W3 748 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 DOCK2Q92608 1830 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 UTYO14607 1347 aa15.65■□□□□ 0.1
CAPN1-223ENST00000533079 MNX1P50219 401 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-223ENST00000533079 IRF5Q13568 498 aa15.64■□□□□ 0.09
CAPN1-223ENST00000533079 RABL6Q3YEC7 729 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-223ENST00000533079 METTL24Q5JXM2 366 aa15.64■□□□□ 0.09
CAPN1-223ENST00000533079 MIGA2Q7L4E1 593 aa15.64■□□□□ 0.09
CAPN1-223ENST00000533079 ECM2O94769 699 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-223ENST00000533079 FASTKD5Q7L8L6 764 aaKnown RBP15.63■□□□□ 0.09
CAPN1-223ENST00000533079 WDR63Q8IWG1 891 aa15.63■□□□□ 0.09
CAPN1-223ENST00000533079 WDR66Q8TBY9 1149 aa15.63■□□□□ 0.09
CAPN1-223ENST00000533079 SUCLG2Q96I99 432 aa15.63■□□□□ 0.09
CAPN1-223ENST00000533079 UNC93B1Q9H1C4 597 aa15.63■□□□□ 0.09
CAPN1-223ENST00000533079 A0A0G2JLL6 359 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-223ENST00000533079 ADCY3O60266 1144 aa15.62■□□□□ 0.09
CAPN1-223ENST00000533079 IFIT1P09914 478 aaKnown RBP15.62■□□□□ 0.09
CAPN1-223ENST00000533079 EXOSC9Q06265 439 aaKnown RBP15.62■□□□□ 0.09
CAPN1-223ENST00000533079 PUM3Q15397 648 aaKnown RBP15.62■□□□□ 0.09
CAPN1-223ENST00000533079 GPAT2Q6NUI2 795 aa15.62■□□□□ 0.09
CAPN1-223ENST00000533079 PRRT2Q7Z6L0 340 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-223ENST00000533079 KAZALD1Q96I82 304 aa15.62■□□□□ 0.09
CAPN1-223ENST00000533079 PAK6Q9NQU5 681 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-223ENST00000533079 INHAP05111 366 aa15.61■□□□□ 0.09
CAPN1-223ENST00000533079 CYP2C8P10632 490 aa15.61■□□□□ 0.09
CAPN1-223ENST00000533079 BMP8BP34820 402 aa15.61■□□□□ 0.09
CAPN1-223ENST00000533079 CRISPLD2Q9H0B8 497 aa15.61■□□□□ 0.09
CAPN1-223ENST00000533079 DOCK1Q14185 1865 aa15.61■□□□□ 0.09
CAPN1-223ENST00000533079 ATRNL1Q5VV63 1379 aa15.61■□□□□ 0.09
CAPN1-223ENST00000533079 SOX1O00570 391 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-223ENST00000533079 FLT3LGP49771 235 aa15.6■□□□□ 0.09
CAPN1-223ENST00000533079 BCAMP50895 628 aa15.6■□□□□ 0.09
CAPN1-223ENST00000533079 LRRC24Q50LG9 513 aa15.6■□□□□ 0.09
CAPN1-223ENST00000533079 SLC4A10Q6U841 1118 aa15.6■□□□□ 0.09
CAPN1-223ENST00000533079 SCYL3Q8IZE3 742 aa15.6■□□□□ 0.09
CAPN1-223ENST00000533079 ANKLE1Q8NAG6 615 aa15.6■□□□□ 0.09
CAPN1-223ENST00000533079 BICC1Q9H694 974 aaKnown RBP15.6■□□□□ 0.09
CAPN1-223ENST00000533079 PICK1Q9NRD5 415 aa15.6■□□□□ 0.09
CAPN1-223ENST00000533079 GABRQQ9UN88 632 aa15.6■□□□□ 0.09
CAPN1-223ENST00000533079 DAGLAQ9Y4D2 1042 aa15.6■□□□□ 0.09
CAPN1-223ENST00000533079 TNPO2O14787 897 aaKnown RBP15.59■□□□□ 0.09
CAPN1-223ENST00000533079 TFRCP02786 760 aaKnown RBP15.59■□□□□ 0.09
CAPN1-223ENST00000533079 NBPF7P0C2Y1 421 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-223ENST00000533079 FGFR2P21802 821 aa15.59■□□□□ 0.09
CAPN1-223ENST00000533079 TCP10Q12799 353 aa15.59■□□□□ 0.09
CAPN1-223ENST00000533079 SMCR8Q8TEV9 937 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-223ENST00000533079 LRCH3Q96II8 777 aa15.59■□□□□ 0.09
CAPN1-223ENST00000533079 DEFB118Q96PH6 123 aa15.59■□□□□ 0.09
CAPN1-223ENST00000533079 PTPRFP10586 1907 aa15.58■□□□□ 0.09
CAPN1-223ENST00000533079 CDC42EP5Q6NZY7 148 aa15.58■□□□□ 0.08
CAPN1-223ENST00000533079 NECAB2Q7Z6G3 386 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms