RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 UBXN2AP68543 259 aa14.48□□□□□ -0.09
CMTM1-216ENST00000533078 ANKRD23Q86SG2 305 aa14.48□□□□□ -0.09
CMTM1-216ENST00000533078 WDR66Q8TBY9 1149 aa14.48□□□□□ -0.09
CMTM1-216ENST00000533078 TRIM47Q96LD4 638 aa14.48□□□□□ -0.09
CMTM1-216ENST00000533078 HTATIP2Q9BUP3 242 aa14.48□□□□□ -0.09
CMTM1-216ENST00000533078 ARHGAP39Q9C0H5 1083 aa14.48□□□□□ -0.09
CMTM1-216ENST00000533078 SRRDQ9UH36 339 aa14.48□□□□□ -0.09
CMTM1-216ENST00000533078 H0YGN5 161 aa14.47□□□□□ -0.09
CMTM1-216ENST00000533078 ANP32CO43423 234 aa14.47□□□□□ -0.09
CMTM1-216ENST00000533078 ECM2O94769 699 aaPredicted RBP14.47□□□□□ -0.09
CMTM1-216ENST00000533078 SLC5A1P13866 664 aa14.47□□□□□ -0.09
CMTM1-216ENST00000533078 BCAMP50895 628 aa14.47□□□□□ -0.09
CMTM1-216ENST00000533078 GRIK5Q16478 980 aa14.47□□□□□ -0.09
CMTM1-216ENST00000533078 RABL6Q3YEC7 729 aaPredicted RBP14.47□□□□□ -0.09
CMTM1-216ENST00000533078 LRRC24Q50LG9 513 aa14.47□□□□□ -0.09
CMTM1-216ENST00000533078 APOBEC3HQ6NTF7 200 aaKnown RBP14.47□□□□□ -0.09
CMTM1-216ENST00000533078 MIGA2Q7L4E1 593 aa14.47□□□□□ -0.09
CMTM1-216ENST00000533078 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.47□□□□□ -0.09
CMTM1-216ENST00000533078 FAM151AQ8WW52 585 aa14.47□□□□□ -0.09
CMTM1-216ENST00000533078 PARK7Q99497 189 aaKnown RBP14.47□□□□□ -0.09
CMTM1-216ENST00000533078 CPA4Q9UI42 421 aa14.47□□□□□ -0.09
CMTM1-216ENST00000533078 UTYO14607 1347 aa14.46□□□□□ -0.09
CMTM1-216ENST00000533078 MYPNQ86TC9 1320 aa14.46□□□□□ -0.09
CMTM1-216ENST00000533078 PDHXO00330 501 aa14.46□□□□□ -0.09
CMTM1-216ENST00000533078 GRK4P32298 578 aa14.46□□□□□ -0.09
CMTM1-216ENST00000533078 C17orf99Q6UX52 265 aa14.46□□□□□ -0.09
CMTM1-216ENST00000533078 GNL3LQ9NVN8 582 aaKnown RBP14.46□□□□□ -0.09
CMTM1-216ENST00000533078 TRIOBPQ9H2D6 2365 aa14.46□□□□□ -0.1
CMTM1-216ENST00000533078 MYH13Q9UKX3 1938 aa14.45□□□□□ -0.1
CMTM1-216ENST00000533078 RANBP2P49792 3224 aaKnown RBP14.45□□□□□ -0.1
CMTM1-216ENST00000533078 FCGRTP55899 365 aa14.45□□□□□ -0.1
CMTM1-216ENST00000533078 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
CMTM1-216ENST00000533078 LPIN2Q92539 896 aa14.45□□□□□ -0.1
CMTM1-216ENST00000533078 KAZALD1Q96I82 304 aa14.45□□□□□ -0.1
CMTM1-216ENST00000533078 NR2E3Q9Y5X4 410 aa14.45□□□□□ -0.1
CMTM1-216ENST00000533078 PTPRCP08575 1304 aa14.44□□□□□ -0.1
CMTM1-216ENST00000533078 OSBPP22059 807 aa14.44□□□□□ -0.1
CMTM1-216ENST00000533078 INPP5BP32019 993 aa14.44□□□□□ -0.1
CMTM1-216ENST00000533078 TCP10Q12799 353 aa14.44□□□□□ -0.1
CMTM1-216ENST00000533078 VGLL2Q8N8G2 317 aa14.44□□□□□ -0.1
CMTM1-216ENST00000533078 SLAIN1Q8ND83 568 aa14.44□□□□□ -0.1
CMTM1-216ENST00000533078 RNF208Q9H0X6 261 aa14.44□□□□□ -0.1
CMTM1-216ENST00000533078 PICK1Q9NRD5 415 aa14.44□□□□□ -0.1
CMTM1-216ENST00000533078 KCNH4Q9UQ05 1017 aa14.44□□□□□ -0.1
CMTM1-216ENST00000533078 CXCL11O14625 94 aa14.43□□□□□ -0.1
CMTM1-216ENST00000533078 LDHBP07195 334 aaKnown RBP14.43□□□□□ -0.1
CMTM1-216ENST00000533078 GJB1P08034 283 aa14.43□□□□□ -0.1
CMTM1-216ENST00000533078 CCL5P13501 91 aa14.43□□□□□ -0.1
CMTM1-216ENST00000533078 GJA8P48165 433 aa14.43□□□□□ -0.1
CMTM1-216ENST00000533078 MTFR1Q15390 333 aa14.43□□□□□ -0.1
CMTM1-216ENST00000533078 FASTKD5Q7L8L6 764 aaKnown RBP14.43□□□□□ -0.1
CMTM1-216ENST00000533078 ZSWIM8A7E2V4 1837 aa14.43□□□□□ -0.1
CMTM1-216ENST00000533078 CAPN2P17655 700 aa14.42□□□□□ -0.1
CMTM1-216ENST00000533078 NOL9Q5SY16 702 aaKnown RBP14.42□□□□□ -0.1
CMTM1-216ENST00000533078 ZGPATQ8N5A5 531 aaKnown RBP14.42□□□□□ -0.1
CMTM1-216ENST00000533078 ANKRD44Q8N8A2 993 aa14.42□□□□□ -0.1
CMTM1-216ENST00000533078 KLHDC4Q8TBB5 520 aa14.42□□□□□ -0.1
CMTM1-216ENST00000533078 SPINK5Q9NQ38 1064 aaPredicted RBP14.42□□□□□ -0.1
CMTM1-216ENST00000533078 ZNF112Q9UJU3 913 aa14.42□□□□□ -0.1
CMTM1-216ENST00000533078 EYA2O00167 538 aa14.41□□□□□ -0.1
CMTM1-216ENST00000533078 FGFR2P21802 821 aa14.41□□□□□ -0.1
CMTM1-216ENST00000533078 CDC42EP5Q6NZY7 148 aa14.41□□□□□ -0.1
CMTM1-216ENST00000533078 ZSCAN29Q8IWY8 852 aaPredicted RBP14.41□□□□□ -0.1
CMTM1-216ENST00000533078 SLF2Q8IX21 1173 aa14.41□□□□□ -0.1
CMTM1-216ENST00000533078 USP40Q9NVE5 1235 aa14.41□□□□□ -0.1
CMTM1-216ENST00000533078 DAGLAQ9Y4D2 1042 aa14.41□□□□□ -0.1
CMTM1-216ENST00000533078 LRRFIP2Q9Y608 721 aaKnown RBP14.41□□□□□ -0.1
CMTM1-216ENST00000533078 FARP2O94887 1054 aaPredicted RBP14.4□□□□□ -0.1
CMTM1-216ENST00000533078 PRKCZQ05513 592 aa14.4□□□□□ -0.1
CMTM1-216ENST00000533078 DIXDC1Q155Q3 683 aa14.4□□□□□ -0.1
CMTM1-216ENST00000533078 FAM9BQ8IZU0 186 aa14.4□□□□□ -0.1
CMTM1-216ENST00000533078 SMCR8Q8TEV9 937 aaPredicted RBP14.4□□□□□ -0.1
CMTM1-216ENST00000533078 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
CMTM1-216ENST00000533078 CEP126Q9P2H0 1117 aa14.4□□□□□ -0.1
CMTM1-216ENST00000533078 DENND2AQ9ULE3 1009 aa14.4□□□□□ -0.1
CMTM1-216ENST00000533078 HDAC5Q9UQL6 1122 aa14.4□□□□□ -0.1
CMTM1-216ENST00000533078 SEMA3EO15041 775 aa14.39□□□□□ -0.11
CMTM1-216ENST00000533078 NFIAQ12857 509 aa14.39□□□□□ -0.11
CMTM1-216ENST00000533078 ATP2B3Q16720 1220 aa14.39□□□□□ -0.11
CMTM1-216ENST00000533078 GADL1Q6ZQY3 521 aa14.39□□□□□ -0.11
CMTM1-216ENST00000533078 MRPL50Q8N5N7 158 aaKnown RBP14.39□□□□□ -0.11
CMTM1-216ENST00000533078 U2AF1L4Q8WU68 220 aaKnown RBP14.39□□□□□ -0.11
CMTM1-216ENST00000533078 RBM27Q9P2N5 1060 aaKnown RBP14.39□□□□□ -0.11
CMTM1-216ENST00000533078 FBXO3Q9UK99 471 aa14.39□□□□□ -0.11
CMTM1-216ENST00000533078 ZHX2Q9Y6X8 837 aa14.39□□□□□ -0.11
CMTM1-216ENST00000533078 ADGRA2Q96PE1 1338 aa14.39□□□□□ -0.11
CMTM1-216ENST00000533078 TNPO2O14787 897 aaKnown RBP14.38□□□□□ -0.11
CMTM1-216ENST00000533078 ADCY3O60266 1144 aa14.38□□□□□ -0.11
CMTM1-216ENST00000533078 EVI5O60447 810 aa14.38□□□□□ -0.11
CMTM1-216ENST00000533078 CYP2C8P10632 490 aa14.38□□□□□ -0.11
CMTM1-216ENST00000533078 BCRP11274 1271 aa14.38□□□□□ -0.11
CMTM1-216ENST00000533078 CTGFP29279 349 aa14.38□□□□□ -0.11
CMTM1-216ENST00000533078 PRDX5P30044 214 aa14.38□□□□□ -0.11
CMTM1-216ENST00000533078 DZIP1Q86YF9 867 aaKnown RBP14.38□□□□□ -0.11
CMTM1-216ENST00000533078 SCYL3Q8IZE3 742 aa14.38□□□□□ -0.11
CMTM1-216ENST00000533078 SLC45A1Q9Y2W3 748 aa14.38□□□□□ -0.11
CMTM1-216ENST00000533078 A0A0G2JLL6 359 aaPredicted RBP14.37□□□□□ -0.11
CMTM1-216ENST00000533078 ENTPD3O75355 529 aa14.37□□□□□ -0.11
CMTM1-216ENST00000533078 TFRCP02786 760 aaKnown RBP14.37□□□□□ -0.11
CMTM1-216ENST00000533078 PRRT2Q7Z6L0 340 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms