RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 ANGEL2Q5VTE6 544 aaKnown RBP2.44□□□□□ -2.02
KNL1-211ENST00000533001 Q7L0L9 218 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 DBNDD1Q9H9R9 158 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 GBA2Q9HCG7 927 aaPredicted RBP2.44□□□□□ -2.02
KNL1-211ENST00000533001 FAM198AQ9UFP1 575 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 STAB1Q9NY15 2570 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 DOCK5Q9H7D0 1870 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 MEGF8Q7Z7M0 2845 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 ZBTB7BO15156 539 aaPredicted RBP2.44□□□□□ -2.02
KNL1-211ENST00000533001 CHRDL2Q6WN34 429 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 AGBL3Q8NEM8 1001 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 GREM2Q9H772 168 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 DDX4Q9NQI0 724 aaKnown RBP2.44□□□□□ -2.02
KNL1-211ENST00000533001 GABRQQ9UN88 632 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 PTCH2Q9Y6C5 1203 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 NID2Q14112 1375 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 SPDYE5A6NIY4 337 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 UBE2Q2LH0YL09 131 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 HOXB7P09629 217 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 FXR2P51116 673 aaKnown RBP eCLIP2.44□□□□□ -2.022e-7■■■■■ 31.4
KNL1-211ENST00000533001 RSBN1LQ6PCB5 846 aaPredicted RBP2.44□□□□□ -2.02
KNL1-211ENST00000533001 SDK1Q7Z5N4 2213 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 PLXNA4Q9HCM2 1894 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 UNCXA6NJT0 531 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 TMPOP42166 694 aaKnown RBP2.44□□□□□ -2.02
KNL1-211ENST00000533001 FKBP1BP68106 108 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 NEUROD1Q13562 356 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 ATG9AQ7Z3C6 839 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 FBXO33Q7Z6M2 555 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 IL16Q14005 1332 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 WDHD1O75717 1129 aaPredicted RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 TAF7Q15545 349 aaPredicted RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 TBC1D10BQ4KMP7 808 aaPredicted RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 XAGE3Q8WTP9 111 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.43□□□□□ -2.02
KNL1-211ENST00000533001 MYOZ2Q9NPC6 264 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 KIF26AQ9ULI4 1882 aaPredicted RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 TGP01266 2768 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 GRIN2DO15399 1336 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 IRF6O14896 467 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 TNNT2P45379 298 aaPredicted RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 HUNKP57058 714 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 DGKZQ13574 1117 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 MAMSTRQ6ZN01 415 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 ZBTB3Q9H5J0 574 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 FLRT1Q9NZU1 646 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 GAKO14976 1311 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 A0A1W2PPC1 479 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 PPEF1O14829 653 aaPredicted RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 CNMDO75829 334 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 NKX3-2P78367 333 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 NFE2L2Q16236 605 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 KIAA1755Q5JYT7 1200 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 BEND3Q5T5X7 828 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 ZBTB38Q8NAP3 1195 aaPredicted RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 FAM84BQ96KN1 310 aaPredicted RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 MRIQ9BWK5 157 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 PRDM6Q9NQX0 595 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 ARID1BQ8NFD5 2236 aaPredicted RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 DOPEY1Q5JWR5 2465 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 ZBTB7CA1YPR0 619 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 ECE2O60344 883 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 TLR2O60603 784 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 LPXNO60711 386 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 GUCY1A2P33402 732 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 SETDB2Q96T68 719 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 MBIPQ9NS73 344 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 CHPF2Q9P2E5 772 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 STXBP5LQ9Y2K9 1186 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 TACC3Q9Y6A5 838 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 SPTBN1Q01082 2364 aaKnown RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 SH3TC1Q8TE82 1336 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 ROBO3Q96MS0 1386 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 MYH8P13535 1937 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 BTBD19C9JJ37 291 aa2.43□□□□□ -2.02
KNL1-211ENST00000533001 PCCAP05165 728 aaPredicted RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 RPS12P25398 132 aaKnown RBP2.43□□□□□ -2.02
KNL1-211ENST00000533001 SPAG17Q6Q759 2223 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 VAMP4O75379 141 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 ZBTB48P10074 688 aaPredicted RBP2.42□□□□□ -2.02
KNL1-211ENST00000533001 BMP1P13497 986 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 GPTP24298 496 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 TPTE2Q6XPS3 522 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 SPDYE1Q8NFV5 336 aaPredicted RBP2.42□□□□□ -2.02
KNL1-211ENST00000533001 FAM163AQ96GL9 167 aaPredicted RBP2.42□□□□□ -2.02
KNL1-211ENST00000533001 WNK4Q96J92 1243 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 MYH4Q9Y623 1939 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 FNDC1Q4ZHG4 1894 aaPredicted RBP2.42□□□□□ -2.02
KNL1-211ENST00000533001 NAV3Q8IVL0 2385 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 GJB1P08034 283 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 INPP5BP32019 993 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 KLHL34Q8N239 644 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 DEFB129Q9H1M3 183 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 OGDHLQ9ULD0 1010 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 PATJQ8NI35 1801 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 ATRQ13535 2644 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 COL6A6A6NMZ7 2263 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 NEURL1BA8MQ27 555 aa2.42□□□□□ -2.02
KNL1-211ENST00000533001 DIAPH1O60610 1272 aaKnown RBP2.42□□□□□ -2.02
KNL1-211ENST00000533001 NOVP48745 357 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms