RNA–Protein interactions for RNA: ENST00000531939.5

IFT46-209, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-209ENST00000531939 COG6Q9Y2V7 657 aa9.34□□□□□ -0.91
IFT46-209ENST00000531939 RBM19Q9Y4C8 960 aaKnown RBP9.34□□□□□ -0.91
IFT46-209ENST00000531939 CPDO75976 1380 aa9.34□□□□□ -0.91
IFT46-209ENST00000531939 RREB1Q92766 1687 aa9.33□□□□□ -0.92
IFT46-209ENST00000531939 CCINQ13939 588 aa9.33□□□□□ -0.92
IFT46-209ENST00000531939 EZH2Q15910 746 aaKnown RBP9.33□□□□□ -0.92
IFT46-209ENST00000531939 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
IFT46-209ENST00000531939 CAMKK2Q96RR4 588 aa9.33□□□□□ -0.92
IFT46-209ENST00000531939 ZMYND15Q9H091 742 aa9.33□□□□□ -0.92
IFT46-209ENST00000531939 KIAA1024Q9UPX6 916 aa9.33□□□□□ -0.92
IFT46-209ENST00000531939 NUP188Q5SRE5 1749 aa9.32□□□□□ -0.92
IFT46-209ENST00000531939 CLDN10P78369 228 aa9.32□□□□□ -0.92
IFT46-209ENST00000531939 IER5Q5VY09 327 aa9.32□□□□□ -0.92
IFT46-209ENST00000531939 FAM196AQ6ZSG2 479 aa9.32□□□□□ -0.92
IFT46-209ENST00000531939 FRRS1LQ9P0K9 344 aa9.32□□□□□ -0.92
IFT46-209ENST00000531939 NAGPAQ9UK23 515 aa9.32□□□□□ -0.92
IFT46-209ENST00000531939 PARP4Q9UKK3 1724 aaKnown RBP9.31□□□□□ -0.92
IFT46-209ENST00000531939 TRIM37O94972 964 aa9.31□□□□□ -0.92
IFT46-209ENST00000531939 R3HDM1Q15032 1099 aaKnown RBP9.31□□□□□ -0.92
IFT46-209ENST00000531939 LARP1Q6PKG0 1096 aaKnown RBP9.31□□□□□ -0.92
IFT46-209ENST00000531939 IGF2-ASQ6U949 168 aa9.31□□□□□ -0.92
IFT46-209ENST00000531939 FAM35AQ86V20 835 aa9.31□□□□□ -0.92
IFT46-209ENST00000531939 QRICH2Q9H0J4 1663 aa9.31□□□□□ -0.92
IFT46-209ENST00000531939 PPIP5K1Q6PFW1 1433 aa9.31□□□□□ -0.92
IFT46-209ENST00000531939 COL5A2P05997 1499 aaPredicted RBP9.3□□□□□ -0.92
IFT46-209ENST00000531939 PARD3Q8TEW0 1356 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 USP17L3A6NCW0 530 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 USP17L4A6NCW7 530 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 NFKB1P19838 968 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 IREB2P48200 963 aaKnown RBP9.3□□□□□ -0.92
IFT46-209ENST00000531939 DIEXFQ68CQ4 756 aaKnown RBP9.3□□□□□ -0.92
IFT46-209ENST00000531939 USP17L2Q6R6M4 530 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 USP17L1Q7RTZ2 530 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 OGFOD1Q8N543 542 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 ABTB2Q8N961 1025 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 C2orf49Q9BVC5 232 aaPredicted RBP9.3□□□□□ -0.92
IFT46-209ENST00000531939 USP35Q9P2H5 1018 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 PEAK1Q9H792 1746 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 SLIT3O75094 1523 aa9.3□□□□□ -0.92
IFT46-209ENST00000531939 COL18A1P39060 1754 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 BRD4O60885 1362 aaPredicted RBP9.29□□□□□ -0.92
IFT46-209ENST00000531939 MAP3K6O95382 1288 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 GCP02774 474 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 EPB42P16452 691 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 MCTP1Q6DN14 999 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 WFDC8Q8IUA0 241 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 KRTAP19-1Q8IUB9 90 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 SIX5Q8N196 739 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 TCP11L2Q8N4U5 519 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 TSEN2Q8NCE0 465 aaKnown RBP9.29□□□□□ -0.92
IFT46-209ENST00000531939 CCER1Q8TC90 406 aaPredicted RBP9.29□□□□□ -0.92
IFT46-209ENST00000531939 CLUAP1Q96AJ1 413 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
IFT46-209ENST00000531939 CENPJQ9HC77 1338 aaPredicted RBP9.29□□□□□ -0.92
IFT46-209ENST00000531939 SBF2Q86WG5 1849 aa9.28□□□□□ -0.92
IFT46-209ENST00000531939 C21orf2O43822 256 aa9.28□□□□□ -0.92
IFT46-209ENST00000531939 NOS3P29474 1203 aa9.28□□□□□ -0.92
IFT46-209ENST00000531939 EVA1CP58658 441 aa9.28□□□□□ -0.92
IFT46-209ENST00000531939 TTC9Q92623 222 aa9.28□□□□□ -0.92
IFT46-209ENST00000531939 THRAP3Q9Y2W1 955 aaKnown RBP9.28□□□□□ -0.92
IFT46-209ENST00000531939 USP6P35125 1406 aa9.28□□□□□ -0.92
IFT46-209ENST00000531939 WNK3Q9BYP7 1800 aa9.28□□□□□ -0.92
IFT46-209ENST00000531939 LRRC37A3O60309 1634 aa9.27□□□□□ -0.92
IFT46-209ENST00000531939 TGFBR3LH3BV60 316 aa9.27□□□□□ -0.93
IFT46-209ENST00000531939 SRPK2P78362 688 aaKnown RBP9.27□□□□□ -0.93
IFT46-209ENST00000531939 PDE3BQ13370 1112 aa9.27□□□□□ -0.93
IFT46-209ENST00000531939 PRR23CQ6ZRP0 262 aa9.27□□□□□ -0.93
IFT46-209ENST00000531939 NLRP13Q86W25 1043 aa9.27□□□□□ -0.93
IFT46-209ENST00000531939 KRTAP9-9Q9BYP9 154 aa9.27□□□□□ -0.93
IFT46-209ENST00000531939 KRTAP9-4Q9BYQ2 154 aa9.27□□□□□ -0.93
IFT46-209ENST00000531939 C11orf16Q9NQ32 467 aa9.27□□□□□ -0.93
IFT46-209ENST00000531939 MKRN1Q9UHC7 482 aaKnown RBP9.27□□□□□ -0.93
IFT46-209ENST00000531939 CRB1P82279 1406 aa9.27□□□□□ -0.93
IFT46-209ENST00000531939 RGPD3A6NKT7 1758 aaPredicted RBP9.27□□□□□ -0.93
IFT46-209ENST00000531939 RGPD4Q7Z3J3 1758 aa9.27□□□□□ -0.93
IFT46-209ENST00000531939 AATKQ6ZMQ8 1374 aa9.26□□□□□ -0.93
IFT46-209ENST00000531939 PAX4O43316 350 aa9.26□□□□□ -0.93
IFT46-209ENST00000531939 CPB1P15086 417 aa9.26□□□□□ -0.93
IFT46-209ENST00000531939 GRIK5Q16478 980 aa9.26□□□□□ -0.93
IFT46-209ENST00000531939 RTN1Q16799 776 aa9.26□□□□□ -0.93
IFT46-209ENST00000531939 ELMSAN1Q6PJG2 1045 aa9.26□□□□□ -0.93
IFT46-209ENST00000531939 LPIN3Q9BQK8 851 aa9.26□□□□□ -0.93
IFT46-209ENST00000531939 PCMTD2Q9NV79 361 aa9.26□□□□□ -0.93
IFT46-209ENST00000531939 AKAP12Q02952 1782 aa9.26□□□□□ -0.93
IFT46-209ENST00000531939 TRPM1Q7Z4N2 1603 aa9.26□□□□□ -0.93
IFT46-209ENST00000531939 RGPD5Q99666 1765 aa9.25□□□□□ -0.93
IFT46-209ENST00000531939 ATP9BO43861 1147 aa9.25□□□□□ -0.93
IFT46-209ENST00000531939 TRPM4Q8TD43 1214 aa9.25□□□□□ -0.93
IFT46-209ENST00000531939 SCG3Q8WXD2 468 aaKnown RBP9.25□□□□□ -0.93
IFT46-209ENST00000531939 POM121Q96HA1 1249 aa9.25□□□□□ -0.93
IFT46-209ENST00000531939 OVOS2A0A0G2JMS6 1433 aa9.24□□□□□ -0.93
IFT46-209ENST00000531939 OVOS2A0A0J9YW53 1432 aa9.24□□□□□ -0.93
IFT46-209ENST00000531939 OVOS2Q6IE36 1432 aa9.24□□□□□ -0.93
IFT46-209ENST00000531939 RAD21O60216 631 aa9.24□□□□□ -0.93
IFT46-209ENST00000531939 ARID4AP29374 1257 aaPredicted RBP9.24□□□□□ -0.93
IFT46-209ENST00000531939 TXKP42681 527 aa9.24□□□□□ -0.93
IFT46-209ENST00000531939 PERM1Q5SV97 790 aa9.24□□□□□ -0.93
IFT46-209ENST00000531939 MEGF10Q96KG7 1140 aa9.24□□□□□ -0.93
IFT46-209ENST00000531939 DMGDHQ9UI17 866 aaKnown RBP9.24□□□□□ -0.93
IFT46-209ENST00000531939 CPSF1Q10570 1443 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms