RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 NEFMP07197 916 aa9.17□□□□□ -0.94
TRIM53CP-201ENST00000531490 WDR43Q15061 677 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRIM53CP-201ENST00000531490 TAF7Q15545 349 aaPredicted RBP9.17□□□□□ -0.94
TRIM53CP-201ENST00000531490 JDP2Q8WYK2 163 aa9.17□□□□□ -0.94
TRIM53CP-201ENST00000531490 ZIC5Q96T25 663 aa9.17□□□□□ -0.94
TRIM53CP-201ENST00000531490 PNNQ9H307 717 aaKnown RBP9.17□□□□□ -0.94
TRIM53CP-201ENST00000531490 UBR2Q8IWV8 1755 aa9.17□□□□□ -0.94
TRIM53CP-201ENST00000531490 MAPK8IP3Q9UPT6 1336 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 EIF6P56537 245 aaKnown RBP9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 CBLBQ13191 982 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 IRF5Q13568 498 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 SCARF1Q14162 830 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 CLEC4GQ6UXB4 293 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 TPTE2Q6XPS3 522 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 RUNDC1Q96C34 613 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 PRM3Q9NNZ6 103 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 TMPRSS4Q9NRS4 437 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 ABCC12Q96J65 1359 aa9.16□□□□□ -0.94
TRIM53CP-201ENST00000531490 ERVH48-1M5A8F1 160 aa9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 ANP32CO43423 234 aa9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 CELF2O95319 508 aaKnown RBP9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 LMOD1P29536 600 aaPredicted RBP9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 ECE1P42892 770 aa9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 C6orf118Q5T5N4 469 aa9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 DLK2Q6UY11 383 aa9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 NGEFQ8N5V2 710 aa9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 GLIS2Q9BZE0 524 aaPredicted RBP9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 ADAMTSL1Q8N6G6 1762 aa9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 SNED1Q8TER0 1413 aa9.15□□□□□ -0.94
TRIM53CP-201ENST00000531490 SCN7AQ01118 1682 aa9.15□□□□□ -0.95
TRIM53CP-201ENST00000531490 APAF1O14727 1248 aa9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 GTF2E1P29083 439 aaPredicted RBP9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 ALDH1B1P30837 517 aa9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 DGKZQ13574 1117 aa9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 CIAPIN1Q6FI81 312 aa9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 Q6ZVU0 165 aa9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 SAPCD2Q86UD0 394 aa9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 LINC00528Q8N1L1 170 aa9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 PNISRQ8TF01 805 aaKnown RBP9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 PSMD1Q99460 953 aa9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 ZNF652Q9Y2D9 606 aa9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 TNRC18O15417 2968 aaPredicted RBP9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 DICER1Q9UPY3 1922 aaKnown RBP9.14□□□□□ -0.95
TRIM53CP-201ENST00000531490 SHTN1A0MZ66 631 aa9.13□□□□□ -0.95
TRIM53CP-201ENST00000531490 SNRPA1P09661 255 aaKnown RBP9.13□□□□□ -0.95
TRIM53CP-201ENST00000531490 GPTP24298 496 aa9.13□□□□□ -0.95
TRIM53CP-201ENST00000531490 MAP2K2P36507 400 aa9.13□□□□□ -0.95
TRIM53CP-201ENST00000531490 MCCD1P59942 119 aaPredicted RBP9.13□□□□□ -0.95
TRIM53CP-201ENST00000531490 ZNF408Q9H9D4 720 aa9.13□□□□□ -0.95
TRIM53CP-201ENST00000531490 PDE4DIPQ5VU43 2346 aa9.13□□□□□ -0.95
TRIM53CP-201ENST00000531490 LTBP1Q14766 1721 aa9.13□□□□□ -0.95
TRIM53CP-201ENST00000531490 SCN4AP35499 1836 aa9.13□□□□□ -0.95
TRIM53CP-201ENST00000531490 UPP2O95045 317 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 BMP2P12643 396 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 ABL2P42684 1182 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 HIRAP54198 1017 aaPredicted RBP9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 SOX10P56693 466 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 EIF4A1P60842 406 aaKnown RBP9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 AOC3Q16853 763 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 CRY2Q49AN0 593 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 USP50Q70EL3 339 aaPredicted RBP9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 TSEN34Q9BSV6 310 aaKnown RBP9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 MRS2Q9HD23 443 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 PPIP5K2O43314 1243 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 LILRA1O75019 489 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 GMPSP49915 693 aaPredicted RBP9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 KRT24Q2M2I5 525 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 TTLL7Q6ZT98 887 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 NIM1KQ8IY84 436 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 TRPM4Q8TD43 1214 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 GPRC5DQ9NZD1 345 aa9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 LAS1LQ9Y4W2 734 aaKnown RBP9.12□□□□□ -0.95
TRIM53CP-201ENST00000531490 ADD1P35611 737 aaKnown RBP9.11□□□□□ -0.95
TRIM53CP-201ENST00000531490 CXCL9Q07325 125 aa9.11□□□□□ -0.95
TRIM53CP-201ENST00000531490 SUSD4Q5VX71 490 aa9.11□□□□□ -0.95
TRIM53CP-201ENST00000531490 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
TRIM53CP-201ENST00000531490 ADARB2Q9NS39 739 aaKnown RBP9.11□□□□□ -0.95
TRIM53CP-201ENST00000531490 TSPYL4Q9UJ04 414 aa9.11□□□□□ -0.95
TRIM53CP-201ENST00000531490 KDM3BQ7LBC6 1761 aa9.11□□□□□ -0.95
TRIM53CP-201ENST00000531490 CACNA1SQ13698 1873 aa9.11□□□□□ -0.95
TRIM53CP-201ENST00000531490 UBN2Q6ZU65 1347 aa9.1□□□□□ -0.95
TRIM53CP-201ENST00000531490 CHL1O00533 1208 aa9.1□□□□□ -0.95
TRIM53CP-201ENST00000531490 RAD17O75943 681 aa9.1□□□□□ -0.95
TRIM53CP-201ENST00000531490 HOXA10P31260 410 aaPredicted RBP9.1□□□□□ -0.95
TRIM53CP-201ENST00000531490 USP48Q86UV5 1035 aa9.1□□□□□ -0.95
TRIM53CP-201ENST00000531490 ZNF592Q92610 1267 aa9.1□□□□□ -0.95
TRIM53CP-201ENST00000531490 AGBL1Q96MI9 1066 aa9.1□□□□□ -0.95
TRIM53CP-201ENST00000531490 COG6Q9Y2V7 657 aa9.1□□□□□ -0.95
TRIM53CP-201ENST00000531490 SOBPA7XYQ1 873 aa9.09□□□□□ -0.95
TRIM53CP-201ENST00000531490 CA12O43570 354 aa9.09□□□□□ -0.95
TRIM53CP-201ENST00000531490 VAC14Q08AM6 782 aa9.09□□□□□ -0.95
TRIM53CP-201ENST00000531490 RNF20Q5VTR2 975 aa9.09□□□□□ -0.95
TRIM53CP-201ENST00000531490 CC2D2BQ6DHV5 1058 aa9.09□□□□□ -0.95
TRIM53CP-201ENST00000531490 FAM9BQ8IZU0 186 aa9.09□□□□□ -0.95
TRIM53CP-201ENST00000531490 RBM17Q96I25 401 aaKnown RBP9.09□□□□□ -0.95
TRIM53CP-201ENST00000531490 CYLDQ9NQC7 956 aa9.09□□□□□ -0.95
TRIM53CP-201ENST00000531490 CEP126Q9P2H0 1117 aa9.09□□□□□ -0.95
TRIM53CP-201ENST00000531490 ZNRF3Q9ULT6 936 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms