RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 NFIAQ12857 509 aa16.68■□□□□ 0.26
HIF3A-214ENST00000531043 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
HIF3A-214ENST00000531043 HHIPL2Q6UWX4 724 aa16.68■□□□□ 0.26
HIF3A-214ENST00000531043 ATG9AQ7Z3C6 839 aa16.68■□□□□ 0.26
HIF3A-214ENST00000531043 ZFPM1Q8IX07 1006 aa16.68■□□□□ 0.26
HIF3A-214ENST00000531043 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-214ENST00000531043 CPA4Q9UI42 421 aa16.68■□□□□ 0.26
HIF3A-214ENST00000531043 DAGLAQ9Y4D2 1042 aa16.68■□□□□ 0.26
HIF3A-214ENST00000531043 RPAP1Q9BWH6 1393 aaPredicted RBP16.67■□□□□ 0.26
HIF3A-214ENST00000531043 EYA2O00167 538 aa16.67■□□□□ 0.26
HIF3A-214ENST00000531043 IFIT1P09914 478 aaKnown RBP16.67■□□□□ 0.26
HIF3A-214ENST00000531043 MOGSQ13724 837 aa16.67■□□□□ 0.26
HIF3A-214ENST00000531043 CDC42EP5Q6NZY7 148 aa16.67■□□□□ 0.26
HIF3A-214ENST00000531043 C17orf99Q6UX52 265 aa16.67■□□□□ 0.26
HIF3A-214ENST00000531043 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
HIF3A-214ENST00000531043 SUGT1Q9Y2Z0 365 aa16.67■□□□□ 0.26
HIF3A-214ENST00000531043 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
HIF3A-214ENST00000531043 PRDX5P30044 214 aa16.66■□□□□ 0.26
HIF3A-214ENST00000531043 FXR1P51114 621 aaKnown RBP eCLIP16.66■□□□□ 0.26
HIF3A-214ENST00000531043 ARHGEF6Q15052 776 aa16.66■□□□□ 0.26
HIF3A-214ENST00000531043 MTFR1Q15390 333 aa16.66■□□□□ 0.26
HIF3A-214ENST00000531043 NBPF11Q86T75 865 aa16.66■□□□□ 0.26
HIF3A-214ENST00000531043 ZCCHC17Q9NP64 241 aaKnown RBP16.66■□□□□ 0.26
HIF3A-214ENST00000531043 FAM198AQ9UFP1 575 aa16.66■□□□□ 0.26
HIF3A-214ENST00000531043 ZNF112Q9UJU3 913 aa16.66■□□□□ 0.26
HIF3A-214ENST00000531043 COLQQ9Y215 455 aaPredicted RBP16.66■□□□□ 0.26
HIF3A-214ENST00000531043 MAST3O60307 1309 aa16.66■□□□□ 0.26
HIF3A-214ENST00000531043 PTPRCP08575 1304 aa16.66■□□□□ 0.26
HIF3A-214ENST00000531043 ADGRA2Q96PE1 1338 aa16.66■□□□□ 0.26
HIF3A-214ENST00000531043 DOCK3Q8IZD9 2030 aa16.65■□□□□ 0.26
HIF3A-214ENST00000531043 MYH2Q9UKX2 1941 aa16.65■□□□□ 0.26
HIF3A-214ENST00000531043 SLURP2P0DP57 97 aa16.65■□□□□ 0.26
HIF3A-214ENST00000531043 SLC5A1P13866 664 aa16.65■□□□□ 0.26
HIF3A-214ENST00000531043 DCAF15Q66K64 600 aa16.65■□□□□ 0.26
HIF3A-214ENST00000531043 FAM151AQ8WW52 585 aa16.65■□□□□ 0.26
HIF3A-214ENST00000531043 SHISA4Q96DD7 197 aa16.65■□□□□ 0.26
HIF3A-214ENST00000531043 TRIM47Q96LD4 638 aa16.65■□□□□ 0.26
HIF3A-214ENST00000531043 SIL1Q9H173 461 aa16.65■□□□□ 0.26
HIF3A-214ENST00000531043 H0YGN5 161 aa16.64■□□□□ 0.25
HIF3A-214ENST00000531043 PDHXO00330 501 aa16.64■□□□□ 0.25
HIF3A-214ENST00000531043 PSMC4P43686 418 aa16.64■□□□□ 0.25
HIF3A-214ENST00000531043 PPATQ06203 517 aa16.64■□□□□ 0.25
HIF3A-214ENST00000531043 KIF22Q14807 665 aa16.64■□□□□ 0.25
HIF3A-214ENST00000531043 WDR66Q8TBY9 1149 aa16.64■□□□□ 0.25
HIF3A-214ENST00000531043 LPIN2Q92539 896 aa16.64■□□□□ 0.25
HIF3A-214ENST00000531043 KCNH4Q9UQ05 1017 aa16.64■□□□□ 0.25
HIF3A-214ENST00000531043 MGAMO43451 1857 aa16.63■□□□□ 0.25
HIF3A-214ENST00000531043 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
HIF3A-214ENST00000531043 OSBPP22059 807 aa16.63■□□□□ 0.25
HIF3A-214ENST00000531043 PHKA1P46020 1223 aa16.63■□□□□ 0.25
HIF3A-214ENST00000531043 ANKRD23Q86SG2 305 aa16.63■□□□□ 0.25
HIF3A-214ENST00000531043 HOOK2Q96ED9 719 aa16.63■□□□□ 0.25
HIF3A-214ENST00000531043 USP40Q9NVE5 1235 aa16.63■□□□□ 0.25
HIF3A-214ENST00000531043 WDHD1O75717 1129 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-214ENST00000531043 ADORA1P30542 326 aa16.62■□□□□ 0.25
HIF3A-214ENST00000531043 GPAT2Q6NUI2 795 aa16.62■□□□□ 0.25
HIF3A-214ENST00000531043 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
HIF3A-214ENST00000531043 SRRDQ9UH36 339 aa16.62■□□□□ 0.25
HIF3A-214ENST00000531043 PA2G4Q9UQ80 394 aaKnown RBP16.62■□□□□ 0.25
HIF3A-214ENST00000531043 RANBP2P49792 3224 aaKnown RBP16.61■□□□□ 0.25
HIF3A-214ENST00000531043 PTPRFP10586 1907 aa16.61■□□□□ 0.25
HIF3A-214ENST00000531043 SZT2Q5T011 3432 aa16.61■□□□□ 0.25
HIF3A-214ENST00000531043 SLFN5Q08AF3 891 aa16.61■□□□□ 0.25
HIF3A-214ENST00000531043 ATP2B3Q16720 1220 aa16.61■□□□□ 0.25
HIF3A-214ENST00000531043 NOL9Q5SY16 702 aaKnown RBP16.61■□□□□ 0.25
HIF3A-214ENST00000531043 SH3BP5LQ7L8J4 393 aa16.61■□□□□ 0.25
HIF3A-214ENST00000531043 ATRNL1Q5VV63 1379 aa16.61■□□□□ 0.25
HIF3A-214ENST00000531043 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
HIF3A-214ENST00000531043 PHF20L1A8MW92 1017 aa16.6■□□□□ 0.25
HIF3A-214ENST00000531043 E9PSI1 815 aa16.6■□□□□ 0.25
HIF3A-214ENST00000531043 FMNL1O95466 1100 aaPredicted RBP16.6■□□□□ 0.25
HIF3A-214ENST00000531043 LDHBP07195 334 aaKnown RBP16.6■□□□□ 0.25
HIF3A-214ENST00000531043 CYP2C8P10632 490 aa16.6■□□□□ 0.25
HIF3A-214ENST00000531043 ZEB1P37275 1124 aaPredicted RBP16.6■□□□□ 0.25
HIF3A-214ENST00000531043 GNRH1P01148 92 aa16.59■□□□□ 0.25
HIF3A-214ENST00000531043 RGS3P49796 1198 aa16.59■□□□□ 0.25
HIF3A-214ENST00000531043 PRMT2P55345 433 aa16.59■□□□□ 0.25
HIF3A-214ENST00000531043 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
HIF3A-214ENST00000531043 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.59■□□□□ 0.25
HIF3A-214ENST00000531043 GABRQQ9UN88 632 aa16.59■□□□□ 0.25
HIF3A-214ENST00000531043 PHIPQ8WWQ0 1821 aa16.59■□□□□ 0.25
HIF3A-214ENST00000531043 CIAO1O76071 339 aa16.58■□□□□ 0.24
HIF3A-214ENST00000531043 UBTFL1P0CB47 393 aaPredicted RBP16.58■□□□□ 0.24
HIF3A-214ENST00000531043 BCRP11274 1271 aa16.58■□□□□ 0.24
HIF3A-214ENST00000531043 GRK4P32298 578 aa16.58■□□□□ 0.24
HIF3A-214ENST00000531043 PRKCZQ05513 592 aa16.58■□□□□ 0.24
HIF3A-214ENST00000531043 RAET1EQ8TD07 263 aa16.58■□□□□ 0.24
HIF3A-214ENST00000531043 DDX4Q9NQI0 724 aaKnown RBP16.58■□□□□ 0.24
HIF3A-214ENST00000531043 SMC4Q9NTJ3 1288 aa16.58■□□□□ 0.24
HIF3A-214ENST00000531043 MYPNQ86TC9 1320 aa16.58■□□□□ 0.24
HIF3A-214ENST00000531043 RFX7Q2KHR2 1363 aa16.58■□□□□ 0.24
HIF3A-214ENST00000531043 SALL1Q9NSC2 1324 aa16.57■□□□□ 0.24
HIF3A-214ENST00000531043 CCL5P13501 91 aa16.57■□□□□ 0.24
HIF3A-214ENST00000531043 UBE2Q1Q7Z7E8 422 aa16.57■□□□□ 0.24
HIF3A-214ENST00000531043 CCDC84Q86UT8 332 aaPredicted RBP16.57■□□□□ 0.24
HIF3A-214ENST00000531043 LRRFIP2Q9Y608 721 aaKnown RBP16.57■□□□□ 0.24
HIF3A-214ENST00000531043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.57■□□□□ 0.24
HIF3A-214ENST00000531043 GAKO14976 1311 aa16.56■□□□□ 0.24
HIF3A-214ENST00000531043 DDTLA6NHG4 134 aaPredicted RBP16.56■□□□□ 0.24
HIF3A-214ENST00000531043 CXCL11O14625 94 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms