RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 RAI14Q9P0K7 980 aa22.94■■□□□ 1.26
GMDS-208ENST00000530927 ANGEL1Q9UNK9 670 aaKnown RBP22.94■■□□□ 1.26
GMDS-208ENST00000530927 SUPT16HQ9Y5B9 1047 aaKnown RBP22.94■■□□□ 1.26
GMDS-208ENST00000530927 RAB11FIP3O75154 756 aa22.93■■□□□ 1.26
GMDS-208ENST00000530927 SPTY2D1Q68D10 685 aaPredicted RBP22.93■■□□□ 1.26
GMDS-208ENST00000530927 NSUN4Q96CB9 384 aaKnown RBP22.93■■□□□ 1.26
GMDS-208ENST00000530927 USP40Q9NVE5 1235 aa22.93■■□□□ 1.26
GMDS-208ENST00000530927 MROH7-TTC4A0A0A0MT08 1334 aa22.93■■□□□ 1.26
GMDS-208ENST00000530927 FKBP1BP68106 108 aa22.92■■□□□ 1.26
GMDS-208ENST00000530927 TCP10Q12799 353 aa22.92■■□□□ 1.26
GMDS-208ENST00000530927 TNFAIP1Q13829 316 aa22.92■■□□□ 1.26
GMDS-208ENST00000530927 RASAL3Q86YV0 1011 aa22.92■■□□□ 1.26
GMDS-208ENST00000530927 ZFPM1Q8IX07 1006 aa22.92■■□□□ 1.26
GMDS-208ENST00000530927 CLASRPQ8N2M8 674 aaKnown RBP22.92■■□□□ 1.26
GMDS-208ENST00000530927 ZNF512BQ96KM6 892 aaPredicted RBP22.92■■□□□ 1.26
GMDS-208ENST00000530927 ANTXR1Q9H6X2 564 aa22.92■■□□□ 1.26
GMDS-208ENST00000530927 LRP2BPQ9P2M1 347 aa22.92■■□□□ 1.26
GMDS-208ENST00000530927 BTDP43251 543 aa22.91■■□□□ 1.26
GMDS-208ENST00000530927 MKRN3Q13064 507 aaKnown RBP22.91■■□□□ 1.26
GMDS-208ENST00000530927 CLMNQ96JQ2 1002 aa22.91■■□□□ 1.26
GMDS-208ENST00000530927 TMOD2Q9NZR1 351 aa22.91■■□□□ 1.26
GMDS-208ENST00000530927 FAM198AQ9UFP1 575 aa22.91■■□□□ 1.26
GMDS-208ENST00000530927 MAST2Q6P0Q8 1798 aa22.91■■□□□ 1.26
GMDS-208ENST00000530927 SLC10A3P09131 477 aa22.91■■□□□ 1.26
GMDS-208ENST00000530927 IFIT2P09913 472 aaKnown RBP22.91■■□□□ 1.26
GMDS-208ENST00000530927 TNNI2P48788 182 aa22.91■■□□□ 1.26
GMDS-208ENST00000530927 DCTPP1Q9H773 170 aa22.91■■□□□ 1.26
GMDS-208ENST00000530927 WBP1LQ9NX94 342 aa22.91■■□□□ 1.26
GMDS-208ENST00000530927 OTOFQ9HC10 1997 aa22.9■■□□□ 1.26
GMDS-208ENST00000530927 FOXN1O15353 648 aa22.9■■□□□ 1.26
GMDS-208ENST00000530927 USP2O75604 605 aaPredicted RBP22.9■■□□□ 1.26
GMDS-208ENST00000530927 SUPT20HL1Q3ZLR7 823 aa22.9■■□□□ 1.26
GMDS-208ENST00000530927 ARMC9Q7Z3E5 817 aa22.9■■□□□ 1.26
GMDS-208ENST00000530927 ADGRA1Q86SQ6 560 aa22.9■■□□□ 1.26
GMDS-208ENST00000530927 LRRCC1Q9C099 1032 aa22.9■■□□□ 1.26
GMDS-208ENST00000530927 CENPBP07199 599 aaPredicted RBP22.89■■□□□ 1.25
GMDS-208ENST00000530927 LDLRAD1Q5T700 205 aa22.89■■□□□ 1.25
GMDS-208ENST00000530927 EXOC6Q8TAG9 804 aa22.89■■□□□ 1.25
GMDS-208ENST00000530927 FAM163AQ96GL9 167 aaPredicted RBP22.89■■□□□ 1.25
GMDS-208ENST00000530927 RFX7Q2KHR2 1363 aa22.88■■□□□ 1.25
GMDS-208ENST00000530927 RHBDL3P58872 404 aa22.88■■□□□ 1.25
GMDS-208ENST00000530927 KIF23Q02241 960 aaPredicted RBP22.88■■□□□ 1.25
GMDS-208ENST00000530927 FAM83AQ86UY5 434 aa22.88■■□□□ 1.25
GMDS-208ENST00000530927 EDC3Q96F86 508 aaKnown RBP22.88■■□□□ 1.25
GMDS-208ENST00000530927 DDX4Q9NQI0 724 aaKnown RBP22.88■■□□□ 1.25
GMDS-208ENST00000530927 GPR75-ASB3A0A0A6YYF3 556 aa22.87■■□□□ 1.25
GMDS-208ENST00000530927 SLURP2P0DP57 97 aa22.87■■□□□ 1.25
GMDS-208ENST00000530927 MAP2K2P36507 400 aa22.87■■□□□ 1.25
GMDS-208ENST00000530927 IRX6P78412 446 aaPredicted RBP22.87■■□□□ 1.25
GMDS-208ENST00000530927 NOGQ13253 232 aa22.87■■□□□ 1.25
GMDS-208ENST00000530927 FKBP1CQ5VVH2 108 aa22.87■■□□□ 1.25
GMDS-208ENST00000530927 CCDC102AQ96A19 550 aa22.87■■□□□ 1.25
GMDS-208ENST00000530927 TSKSQ9UJT2 592 aa22.87■■□□□ 1.25
GMDS-208ENST00000530927 PPP1R12BO60237 982 aaPredicted RBP22.86■■□□□ 1.25
GMDS-208ENST00000530927 WDHD1O75717 1129 aaPredicted RBP22.86■■□□□ 1.25
GMDS-208ENST00000530927 IDH1O75874 414 aaKnown RBP22.86■■□□□ 1.25
GMDS-208ENST00000530927 RGS3P49796 1198 aa22.86■■□□□ 1.25
GMDS-208ENST00000530927 PICALMQ13492 652 aa22.86■■□□□ 1.25
GMDS-208ENST00000530927 MAP3K11Q16584 847 aa22.86■■□□□ 1.25
GMDS-208ENST00000530927 NAA16Q6N069 864 aaPredicted RBP22.86■■□□□ 1.25
GMDS-208ENST00000530927 MIGA2Q7L4E1 593 aa22.86■■□□□ 1.25
GMDS-208ENST00000530927 SLF2Q8IX21 1173 aa22.86■■□□□ 1.25
GMDS-208ENST00000530927 DNAJC2Q99543 621 aaKnown RBP22.86■■□□□ 1.25
GMDS-208ENST00000530927 DOCK2Q92608 1830 aa22.86■■□□□ 1.25
GMDS-208ENST00000530927 TSHZ3Q63HK5 1081 aa22.85■■□□□ 1.25
GMDS-208ENST00000530927 FAM151AQ8WW52 585 aa22.85■■□□□ 1.25
GMDS-208ENST00000530927 GSTO1P78417 241 aa22.84■■□□□ 1.25
GMDS-208ENST00000530927 MAP2K1Q02750 393 aaPredicted RBP22.84■■□□□ 1.25
GMDS-208ENST00000530927 SH3BP5LQ7L8J4 393 aa22.84■■□□□ 1.25
GMDS-208ENST00000530927 SH3RF3Q8TEJ3 882 aaPredicted RBP22.84■■□□□ 1.25
GMDS-208ENST00000530927 BOLA2Q9H3K6 86 aa22.84■■□□□ 1.25
GMDS-208ENST00000530927 AATFQ9NY61 560 aaKnown RBP eCLIP22.84■■□□□ 1.25
GMDS-208ENST00000530927 IDI2Q9BXS1 227 aa22.83■■□□□ 1.25
GMDS-208ENST00000530927 RPAP1Q9BWH6 1393 aaPredicted RBP22.83■■□□□ 1.25
GMDS-208ENST00000530927 GOLIM4O00461 696 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 LDHCP07864 332 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 GJA5P36382 358 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 IREB2P48200 963 aaKnown RBP22.82■■□□□ 1.24
GMDS-208ENST00000530927 DYNLL1P63167 89 aaKnown RBP22.82■■□□□ 1.24
GMDS-208ENST00000530927 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.82■■□□□ 1.24
GMDS-208ENST00000530927 MAGEB6Q8N7X4 407 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 CNKSR2Q8WXI2 1034 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 AIDAQ96BJ3 306 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 CSRNP1Q96S65 589 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 ELP3Q9H9T3 547 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 AK9Q5TCS8 1911 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 DDTLA6NHG4 134 aaPredicted RBP22.82■■□□□ 1.24
GMDS-208ENST00000530927 CYP7A1P22680 504 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 SLFNL1Q499Z3 407 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 OTUD7AQ8TE49 926 aaPredicted RBP22.82■■□□□ 1.24
GMDS-208ENST00000530927 SLC10A4Q96EP9 437 aa22.82■■□□□ 1.24
GMDS-208ENST00000530927 CHGBP05060 677 aa22.81■■□□□ 1.24
GMDS-208ENST00000530927 MIGA1Q8NAN2 632 aa22.81■■□□□ 1.24
GMDS-208ENST00000530927 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.81■■□□□ 1.247e-6■■■□□ 14.8
GMDS-208ENST00000530927 ATRNL1Q5VV63 1379 aa22.8■■□□□ 1.24
GMDS-208ENST00000530927 HSPA8P11142 646 aaKnown RBP22.8■■□□□ 1.24
GMDS-208ENST00000530927 ATP5JP18859 108 aa22.8■■□□□ 1.24
GMDS-208ENST00000530927 VGLL4Q14135 290 aa22.8■■□□□ 1.24
GMDS-208ENST00000530927 COL13A1Q5TAT6 717 aaPredicted RBP22.8■■□□□ 1.24
GMDS-208ENST00000530927 SPRYD7Q5W111 196 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms