RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 VCPKMTQ9H867 229 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 SUGCTQ9HAC7 445 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 CD248Q9HCU0 757 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 KLC4Q9NSK0 619 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 SLC4A2P04920 1241 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 SLC5A9Q2M3M2 681 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 ARHGEF25Q86VW2 580 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 TCP11Q8WWU5 503 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 PSMD1Q99460 953 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 KDRP35968 1356 aa9.27□□□□□ -0.92
CSDE1-214ENST00000530886 SRRM3A6NNA2 597 aaPredicted RBP9.27□□□□□ -0.93
CSDE1-214ENST00000530886 MPHOSPH10O00566 681 aaKnown RBP9.27□□□□□ -0.93
CSDE1-214ENST00000530886 FBLN2P98095 1184 aa9.27□□□□□ -0.93
CSDE1-214ENST00000530886 DPCR1Q3MIW9 517 aa9.27□□□□□ -0.93
CSDE1-214ENST00000530886 CCDC12Q8WUD4 166 aaPredicted RBP9.27□□□□□ -0.93
CSDE1-214ENST00000530886 MAP4K1Q92918 833 aa9.27□□□□□ -0.93
CSDE1-214ENST00000530886 NUCKS1Q9H1E3 243 aaKnown RBP9.27□□□□□ -0.93
CSDE1-214ENST00000530886 MYO5AQ9Y4I1 1855 aaKnown RBP9.27□□□□□ -0.93
CSDE1-214ENST00000530886 TARSL2A2RTX5 802 aaKnown RBP9.27□□□□□ -0.93
CSDE1-214ENST00000530886 ACTN3Q08043 901 aaPredicted RBP9.27□□□□□ -0.93
CSDE1-214ENST00000530886 A0A087WWV3 80 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 PFKFB2O60825 505 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 MYBL2P10244 700 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 PRPHP41219 470 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 PDCD2Q16342 344 aaPredicted RBP9.26□□□□□ -0.93
CSDE1-214ENST00000530886 MICALCLQ6ZW33 695 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 COG1Q8WTW3 980 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 CDK19Q9BWU1 502 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 CAPS2Q9BXY5 557 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 SPG7Q9UQ90 795 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 SALL1Q9NSC2 1324 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 MYO1FO00160 1098 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 COQ9O75208 318 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 ZKSCAN1P17029 563 aaPredicted RBP9.26□□□□□ -0.93
CSDE1-214ENST00000530886 WWC2Q6AWC2 1192 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 TAX1BP1Q86VP1 789 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 ZRANB1Q9UGI0 708 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 EPB41P11171 864 aaKnown RBP9.26□□□□□ -0.93
CSDE1-214ENST00000530886 TOP1P11387 765 aaKnown RBP9.26□□□□□ -0.93
CSDE1-214ENST00000530886 EMC10Q5UCC4 262 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 SMARCC2Q8TAQ2 1214 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 BCAS4Q8TDM0 211 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 MRPS27Q92552 414 aaKnown RBP9.26□□□□□ -0.93
CSDE1-214ENST00000530886 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
CSDE1-214ENST00000530886 CCDC9Q9Y3X0 531 aaKnown RBP9.26□□□□□ -0.93
CSDE1-214ENST00000530886 PHACTR2O75167 634 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 SNUPNO95149 360 aaKnown RBP9.25□□□□□ -0.93
CSDE1-214ENST00000530886 UBASH3AP57075 661 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 CEP85LQ5SZL2 805 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 ADALQ6DHV7 355 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 TTLL7Q6ZT98 887 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 TOGARAM2Q6ZUX3 1019 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 ZNF396Q96N95 335 aaPredicted RBP9.25□□□□□ -0.93
CSDE1-214ENST00000530886 LLPHQ9BRT6 129 aaKnown RBP9.25□□□□□ -0.93
CSDE1-214ENST00000530886 MYO1AQ9UBC5 1043 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 DDX20Q9UHI6 824 aaKnown RBP9.25□□□□□ -0.93
CSDE1-214ENST00000530886 CTAGE15A4D2H0 777 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 AGPSO00116 658 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 KIAA0754O94854 1291 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 CCDC175P0C221 793 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 CTAGE8P0CG41 777 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 PECAM1P16284 738 aaPredicted RBP9.25□□□□□ -0.93
CSDE1-214ENST00000530886 RPS6KB1P23443 525 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 RBBP5Q15291 538 aaKnown RBP9.25□□□□□ -0.93
CSDE1-214ENST00000530886 MCM10Q7L590 875 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 CTAGE6Q86UF2 777 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 CTAGE4Q8IX94 777 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 TC2NQ8N9U0 490 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 NAA15Q9BXJ9 866 aaKnown RBP9.25□□□□□ -0.93
CSDE1-214ENST00000530886 NCAPD2Q15021 1401 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.25□□□□□ -0.93
CSDE1-214ENST00000530886 GOLGA8KD6RF30 607 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 SLC8A1P32418 973 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 MICAL1Q8TDZ2 1067 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 RUBCNQ92622 972 aa9.25□□□□□ -0.93
CSDE1-214ENST00000530886 OVOS2A0A0G2JMS6 1433 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 NBPF7P0C2Y1 421 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 RPS6KA3P51812 740 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 CLNS1AP54105 237 aaKnown RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 STIM1Q13586 685 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 CCDC40Q4G0X9 1142 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 FILIP1LQ4L180 1135 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 USPL1Q5W0Q7 1092 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 CREB3L3Q68CJ9 461 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 PRPF40BQ6NWY9 871 aaKnown RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 KIAA1328Q86T90 577 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 FSIP1Q8NA03 581 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 HOOK2Q96ED9 719 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 ACTR5Q9H9F9 607 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 LMO7Q8WWI1 1683 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 FER1L4A9Z1Z3 1794 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 GOLGA6CA6NDK9 693 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 MAP4K4O95819 1239 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 GOLGA6DP0CG33 693 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 EZRP15311 586 aaKnown RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 IFFO1Q0D2I5 559 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 SNCBQ16143 134 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 RHPN1Q8TCX5 695 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 BRF1Q92994 677 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 PANX2Q96RD6 677 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms