RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 Q6ZUG5 572 aa8.7□□□□□ -1.02
BDNF-214ENST00000530786 TMX3Q96JJ7 454 aa8.7□□□□□ -1.02
BDNF-214ENST00000530786 ARPP21Q9UBL0 812 aaPredicted RBP8.7□□□□□ -1.02
BDNF-214ENST00000530786 MTMR7Q9Y216 660 aa8.7□□□□□ -1.02
BDNF-214ENST00000530786 SUGT1Q9Y2Z0 365 aa8.7□□□□□ -1.02
BDNF-214ENST00000530786 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.7□□□□□ -1.02
BDNF-214ENST00000530786 RPAP1Q9BWH6 1393 aaPredicted RBP8.7□□□□□ -1.02
BDNF-214ENST00000530786 MPHOSPH10O00566 681 aaKnown RBP8.69□□□□□ -1.02
BDNF-214ENST00000530786 RPS6KB1P23443 525 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 PRDX5P30044 214 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 BTDP43251 543 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 WTAPQ15007 396 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 DLGAP5Q15398 846 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 PPP4R3BQ5MIZ7 849 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 TDRD7Q8NHU6 1098 aaKnown RBP8.69□□□□□ -1.02
BDNF-214ENST00000530786 TCEANC2Q96MN5 208 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 GJA3Q9Y6H8 435 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 VIRMAQ69YN4 1812 aaKnown RBP8.69□□□□□ -1.02
BDNF-214ENST00000530786 PAPPAQ13219 1627 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 C4BP0C0L5 1744 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 SHANK3Q9BYB0 1731 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 CATIPQ7Z7H3 387 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 GOLGA8BA8MQT2 603 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 ECE2O60344 883 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 TSPY3P0CV98 308 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 TSPY8P0CW00 308 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 AK2P54819 239 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 HMGN5P82970 282 aaKnown RBP8.69□□□□□ -1.02
BDNF-214ENST00000530786 SLC4A8Q2Y0W8 1093 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 LARP1BQ659C4 914 aaKnown RBP8.69□□□□□ -1.02
BDNF-214ENST00000530786 TGFBRAP1Q8WUH2 860 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 STRBPQ96SI9 672 aaKnown RBP8.69□□□□□ -1.02
BDNF-214ENST00000530786 USP40Q9NVE5 1235 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 DDX11L8A8MPP1 907 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 TNNI2P48788 182 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 AOC3Q16853 763 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 CTCFLQ8NI51 663 aaPredicted RBP8.69□□□□□ -1.02
BDNF-214ENST00000530786 SDR42E1Q8WUS8 393 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 MED23Q9ULK4 1368 aa8.69□□□□□ -1.02
BDNF-214ENST00000530786 MYO3BQ8WXR4 1341 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 WDR33Q9C0J8 1336 aaKnown RBP8.68□□□□□ -1.02
BDNF-214ENST00000530786 USP17L12C9JPN9 530 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 USP17L21D6R901 530 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 E7EWF7 191 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 SCNN1DP51172 638 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 NECTIN1Q15223 517 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 AKNAD1Q5T1N1 836 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 WASF1Q92558 559 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 TMEM87BQ96K49 555 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 LARP6Q9BRS8 491 aaKnown RBP8.68□□□□□ -1.02
BDNF-214ENST00000530786 LRRC2Q9BYS8 371 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 VEZTQ9HBM0 779 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 CABP5Q9NP86 173 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 POLLQ9UGP5 575 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 PALD1Q9ULE6 856 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 WNK3Q9BYP7 1800 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 RIC1Q4ADV7 1423 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 KDM4AO75164 1064 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
BDNF-214ENST00000530786 PPARAQ07869 468 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 MAPKAPK5Q8IW41 473 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 LCORLQ8N3X6 602 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 UPF1Q92900 1129 aaKnown RBP eCLIP8.68□□□□□ -1.02
BDNF-214ENST00000530786 BRMS1Q9HCU9 246 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 CD2APQ9Y5K6 639 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 KLF18A0A0U1RQI7 1052 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 GOLGA8AA7E2F4 631 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 CYP21A2P08686 494 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 PCP11498 1178 aaKnown RBP8.68□□□□□ -1.02
BDNF-214ENST00000530786 GPR162Q16538 588 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 RBM26Q5T8P6 1007 aaKnown RBP8.68□□□□□ -1.02
BDNF-214ENST00000530786 KAT14Q9H8E8 782 aa8.68□□□□□ -1.02
BDNF-214ENST00000530786 CTDP1Q9Y5B0 961 aaPredicted RBP8.68□□□□□ -1.02
BDNF-214ENST00000530786 B4E1Z4 1266 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 DYNLL1P63167 89 aaKnown RBP8.67□□□□□ -1.02
BDNF-214ENST00000530786 IKQ13123 557 aaPredicted RBP8.67□□□□□ -1.02
BDNF-214ENST00000530786 DIXDC1Q155Q3 683 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 IFIT1BQ5T764 474 aaKnown RBP8.67□□□□□ -1.02
BDNF-214ENST00000530786 CIAPIN1Q6FI81 312 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 ZSWIM6Q9HCJ5 1215 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 PDS5AQ29RF7 1337 aaKnown RBP8.67□□□□□ -1.02
BDNF-214ENST00000530786 ZBTB43O43298 467 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 RAD17O75943 681 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 KLRK1P26718 216 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 KIF5BP33176 963 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 METAP2P50579 478 aaKnown RBP eCLIP8.67□□□□□ -1.02
BDNF-214ENST00000530786 SF3A1Q15459 793 aaKnown RBP8.67□□□□□ -1.02
BDNF-214ENST00000530786 STRIP1Q5VSL9 837 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 GIMAP6Q6P9H5 292 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 RASEFQ8IZ41 740 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 ZNF277Q9NRM2 450 aaPredicted RBP8.67□□□□□ -1.02
BDNF-214ENST00000530786 SAP30BPQ9UHR5 308 aaKnown RBP8.67□□□□□ -1.02
BDNF-214ENST00000530786 STX8Q9UNK0 236 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 H7C1D1 291 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 CPA1P15085 419 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 ZRSR1Q15695 479 aaKnown RBP8.67□□□□□ -1.02
BDNF-214ENST00000530786 C15orf52Q6ZUT6 534 aaKnown RBP8.67□□□□□ -1.02
BDNF-214ENST00000530786 CHST3Q7LGC8 479 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 MICU3Q86XE3 530 aa8.67□□□□□ -1.02
BDNF-214ENST00000530786 NSUN4Q96CB9 384 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms