RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ZBTB7BO15156 539 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-227ENST00000530748 SLU7O95391 586 aaKnown RBP9.55□□□□□ -0.88
CTNND1-227ENST00000530748 SEL1L2Q5TEA6 688 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 XAGE2Q96GT9 111 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 BEGAINQ9BUH8 593 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 ARMT1Q9H993 441 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 ARHGEF10LQ9HCE6 1279 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 CCNT1O60563 726 aaKnown RBP9.54□□□□□ -0.88
CTNND1-227ENST00000530748 IVLP07476 585 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 KRT24Q2M2I5 525 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 DPH6Q7L8W6 267 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 KIFAP3Q92845 792 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 CAPZA3Q96KX2 299 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 TTC14Q96N46 770 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 TESK2Q96S53 571 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 SLC52A2Q9HAB3 445 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 A0A1B0GUL7 405 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 STX17P56962 302 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 CNNM4Q6P4Q7 775 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 ZNF790Q6PG37 636 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 CNGA4Q8IV77 575 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 TCHPQ9BT92 498 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 TMOD4Q9NZQ9 345 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 IFNKQ9P0W0 207 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 KIF24Q5T7B8 1368 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 MAP3K19Q56UN5 1328 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 ATP2A2P16615 1042 aaKnown RBP9.54□□□□□ -0.88
CTNND1-227ENST00000530748 CCT6AP40227 531 aaKnown RBP9.54□□□□□ -0.88
CTNND1-227ENST00000530748 PRIM1P49642 420 aaKnown RBP9.54□□□□□ -0.88
CTNND1-227ENST00000530748 SELENOSQ9BQE4 189 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 GGA1Q9UJY5 639 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 HSPA4P34932 840 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 ZNF569Q5MCW4 686 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-227ENST00000530748 PLIN2Q99541 437 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 MAK16Q9BXY0 300 aaKnown RBP9.54□□□□□ -0.88
CTNND1-227ENST00000530748 GPCPD1Q9NPB8 672 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 GUCA1BQ9UMX6 200 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 MROH5Q6ZUA9 1318 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 VWA3AA6NCI4 1184 aa9.54□□□□□ -0.88
CTNND1-227ENST00000530748 AKR1B15C9JRZ8 316 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-227ENST00000530748 DCAF17Q5H9S7 520 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-227ENST00000530748 GRM1Q13255 1194 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 WDR44Q5JSH3 913 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 ANKS4BQ8N8V4 417 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 RNF216Q9NWF9 866 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-227ENST00000530748 NPC1L1Q9UHC9 1359 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 TNNC1P63316 161 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 MXRA7P84157 204 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 FAM160A1Q05DH4 1040 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 VWA3BQ502W6 1294 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 CCDC63Q8NA47 563 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 GLT8D2Q9H1C3 349 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 PICK1Q9NRD5 415 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 JAG2Q9Y219 1238 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 B4E1Z4 1266 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 KARSQ15046 597 aaKnown RBP9.53□□□□□ -0.88
CTNND1-227ENST00000530748 LETM2Q2VYF4 491 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 RILPL1Q5EBL4 403 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 HAUS3Q68CZ6 603 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 MSL1Q68DK7 614 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 CCNL1Q9UK58 526 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-227ENST00000530748 ZKSCAN5Q9Y2L8 839 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 PPP1R7Q15435 360 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 HS1BP3Q53T59 392 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 EXOC7Q9UPT5 735 aa9.53□□□□□ -0.88
CTNND1-227ENST00000530748 KRT5P13647 590 aa9.52□□□□□ -0.88
CTNND1-227ENST00000530748 TERF1P54274 439 aa9.52□□□□□ -0.88
CTNND1-227ENST00000530748 MYL5Q02045 173 aa9.52□□□□□ -0.88
CTNND1-227ENST00000530748 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.52□□□□□ -0.88
CTNND1-227ENST00000530748 NOC4LQ9BVI4 516 aaKnown RBP9.52□□□□□ -0.88
CTNND1-227ENST00000530748 SNX14Q9Y5W7 946 aa9.52□□□□□ -0.88
CTNND1-227ENST00000530748 RAPGEF1Q13905 1077 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 CCDC14Q49A88 953 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 PIK3AP1Q6ZUJ8 805 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 CCDC114Q96M63 670 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 LUC7L2Q9Y383 392 aaKnown RBP9.52□□□□□ -0.89
CTNND1-227ENST00000530748 TBX22Q9Y458 520 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 ZFYVE16Q7Z3T8 1539 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 BACH1O14867 736 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 MTRF1LQ9UGC7 380 aaKnown RBP9.52□□□□□ -0.89
CTNND1-227ENST00000530748 MTUS1Q9ULD2 1270 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 SMTNP53814 917 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 AKNAD1Q5T1N1 836 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 CEP128Q6ZU80 1094 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 G2E3Q7L622 706 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 JAKMIP2Q96AA8 810 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 PDE4DQ08499 809 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 ASIC2Q16515 512 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 SPATA24Q86W54 205 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 SUPT20HQ8NEM7 779 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 APPBP2Q92624 585 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 LZTFL1Q9NQ48 299 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 STK32BQ9NY57 414 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 ATP6V0A2Q9Y487 856 aa9.52□□□□□ -0.89
CTNND1-227ENST00000530748 XRCC6P12956 609 aaKnown RBP eCLIP9.51□□□□□ -0.892e-8■□□□□ 8.5
CTNND1-227ENST00000530748 KCNA6P17658 529 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 CFAP58Q5T655 872 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 ANO1Q5XXA6 986 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 CYP26C1Q6V0L0 522 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms