RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 RIN3Q8TB24 985 aa4.6□□□□□ -1.67
ARHGEF12-209ENST00000530388 TIFAQ96CG3 184 aa4.6□□□□□ -1.67
ARHGEF12-209ENST00000530388 OSBPL7Q9BZF2 842 aa4.6□□□□□ -1.67
ARHGEF12-209ENST00000530388 KBTBD4Q9NVX7 518 aa4.6□□□□□ -1.67
ARHGEF12-209ENST00000530388 SLC5A4Q9NY91 659 aa4.6□□□□□ -1.67
ARHGEF12-209ENST00000530388 TMEM238LA0A1B0GVL6 79 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 hCG_1642624A0A1W2PR95 340 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 SNUPNO95149 360 aaKnown RBP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 CLK1P49759 484 aaKnown RBP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 MMP14P50281 582 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 TBX2Q13207 712 aaPredicted RBP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 PERM1Q5SV97 790 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 CFAP58Q5T655 872 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 USPL1Q5W0Q7 1092 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 RETREG3Q86VR2 466 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 DZIP3Q86Y13 1208 aaKnown RBP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 N4BP2L2Q92802 583 aaPredicted RBP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 SAP30BPQ9UHR5 308 aaKnown RBP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 TRIM64CA6NLI5 447 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 MCM4P33991 863 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 MTA1Q13330 715 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 SAFBQ15424 915 aaKnown RBP eCLIP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 C4orf48Q5BLP8 95 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 SH3PXD2AQ5TCZ1 1133 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 CCDC81Q6ZN84 652 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 ZSWIM2Q8NEG5 633 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 WDR66Q8TBY9 1149 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 SCG3Q8WXD2 468 aaKnown RBP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 SLC7A3Q8WY07 619 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 SLC39A7Q92504 469 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 EMID1Q96A84 441 aaPredicted RBP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 PGBD4Q96DM1 585 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 VMP1Q96GC9 406 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 TRIM56Q9BRZ2 755 aaKnown RBP4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 CCDC113Q9H0I3 377 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 PPP1R9AQ9ULJ8 1098 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 WASHC2CQ9Y4E1 1318 aa4.59□□□□□ -1.67
ARHGEF12-209ENST00000530388 C19orf67A6NJJ6 358 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 RGS20O76081 388 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 MBD4O95243 580 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 PLCG2P16885 1265 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 STAT3P40763 770 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 ZBED6P86452 979 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 PTK2Q05397 1052 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 C2orf27AQ580R0 203 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 RILPL1Q5EBL4 403 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 COX20Q5RI15 118 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 MORN1Q5T089 497 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 TNS4Q8IZW8 715 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 TAB3Q8N5C8 712 aaPredicted RBP4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 CELF2-AS1Q8N7Q2 184 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 SPATA17Q96L03 361 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 TRIM6Q9C030 488 aaPredicted RBP4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 TSPAN10Q9H1Z9 355 aaPredicted RBP4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 IRAK4Q9NWZ3 460 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 KIAA1468Q9P260 1216 aa4.59□□□□□ -1.68
ARHGEF12-209ENST00000530388 TMEM229AB2RXF0 380 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 IDEP14735 1019 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 PRPHP41219 470 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 SQSTM1Q13501 440 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 DNAJC21Q5F1R6 531 aaKnown RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 FAM102BQ5T8I3 360 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 ZBTB33Q86T24 672 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 USP3Q9Y6I4 520 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 WASHC2AQ641Q2 1341 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 GTPBP10A4D1E9 387 aaKnown RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 FXNQ16595 210 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 INF2Q27J81 1249 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 IQCA1Q86XH1 822 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 DZIP1Q86YF9 867 aaKnown RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 EGFL6Q8IUX8 553 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 FAM186BQ8IYM0 893 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 SPATA5Q8NB90 893 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 AFAP1L1Q8TED9 768 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 CHMP4CQ96CF2 233 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 LTV1Q96GA3 475 aaPredicted RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 XPO4Q9C0E2 1151 aaKnown RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 SCHIP1Q9P0W5 487 aaPredicted RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 SLC45A1Q9Y2W3 748 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 A6NJY4 79 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 IFIT1P09914 478 aaKnown RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 GTF2E1P29083 439 aaPredicted RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 TAF12Q16514 161 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 ITPRIPL1Q6GPH6 555 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 EEPD1Q7L9B9 569 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 PJA1Q8NG27 643 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 CSRNP1Q96S65 589 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 CARD14Q9BXL6 1004 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 OBP2AQ9NY56 170 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 FRMPD2Q68DX3 1309 aaPredicted RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 SFSWAPQ12872 951 aaKnown RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 PTPN14Q15678 1187 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 TTC31Q49AM3 519 aaPredicted RBP4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 SRLQ86TD4 932 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 ARL6IP6Q8N6S5 226 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 TTC17Q96AE7 1141 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 MAFFQ9ULX9 164 aa4.58□□□□□ -1.68
ARHGEF12-209ENST00000530388 LUC7L2Q9Y383 392 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms