RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 WEE1P30291 646 aa12.26□□□□□ -0.45
CCDC90B-217ENST00000530253 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-217ENST00000530253 NRLP54845 237 aa12.26□□□□□ -0.45
CCDC90B-217ENST00000530253 GRIK5Q16478 980 aa12.26□□□□□ -0.45
CCDC90B-217ENST00000530253 WFDC12Q8WWY7 111 aa12.26□□□□□ -0.45
CCDC90B-217ENST00000530253 QTRT2Q9H974 415 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-217ENST00000530253 ZFATQ9P243 1243 aa12.26□□□□□ -0.45
CCDC90B-217ENST00000530253 IFT43Q96FT9 208 aa12.25□□□□□ -0.45
CCDC90B-217ENST00000530253 PHLPP1O60346 1717 aa12.25□□□□□ -0.45
CCDC90B-217ENST00000530253 TARSP26639 723 aaKnown RBP12.24□□□□□ -0.45
CCDC90B-217ENST00000530253 LMOD1P29536 600 aaPredicted RBP12.24□□□□□ -0.45
CCDC90B-217ENST00000530253 NHSL1Q5SYE7 1610 aa12.24□□□□□ -0.45
CCDC90B-217ENST00000530253 CDK19Q9BWU1 502 aa12.24□□□□□ -0.45
CCDC90B-217ENST00000530253 RGPD8O14715 1765 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 KIF1AQ12756 1690 aa12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 AHDC1Q5TGY3 1603 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 ZBTB42B2RXF5 422 aa12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 LGR5O75473 907 aa12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 SASH3O75995 380 aa12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 EIF2AK2P19525 551 aaKnown RBP12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 ORAI2Q96SN7 254 aa12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 ITSN1Q15811 1721 aa12.23□□□□□ -0.45
CCDC90B-217ENST00000530253 EGFRP00533 1210 aa12.22□□□□□ -0.45
CCDC90B-217ENST00000530253 IREB2P48200 963 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-217ENST00000530253 SMG9Q9H0W8 520 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-217ENST00000530253 SRA1Q9HD15 236 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-217ENST00000530253 A6NJR5 290 aa12.21□□□□□ -0.45
CCDC90B-217ENST00000530253 MLLT1Q03111 559 aaPredicted RBP12.21□□□□□ -0.45
CCDC90B-217ENST00000530253 NUDT16Q96DE0 195 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-217ENST00000530253 ARXQ96QS3 562 aa12.21□□□□□ -0.45
CCDC90B-217ENST00000530253 RBSNQ9H1K0 784 aa12.21□□□□□ -0.45
CCDC90B-217ENST00000530253 TLR7Q9NYK1 1049 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-217ENST00000530253 RTCBQ9Y3I0 505 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-217ENST00000530253 MYOM1P52179 1685 aa12.2□□□□□ -0.46
CCDC90B-217ENST00000530253 COL16A1Q07092 1604 aaPredicted RBP12.2□□□□□ -0.46
CCDC90B-217ENST00000530253 NOS3P29474 1203 aa12.2□□□□□ -0.46
CCDC90B-217ENST00000530253 PLAURQ03405 335 aa12.2□□□□□ -0.46
CCDC90B-217ENST00000530253 FAM200AQ8TCP9 573 aa12.2□□□□□ -0.46
CCDC90B-217ENST00000530253 DDX17Q92841 729 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-217ENST00000530253 PUS7Q96PZ0 661 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-217ENST00000530253 PXDNQ92626 1479 aa12.2□□□□□ -0.46
CCDC90B-217ENST00000530253 PSAPP07602 524 aa12.19□□□□□ -0.46
CCDC90B-217ENST00000530253 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
CCDC90B-217ENST00000530253 SLC51AQ86UW1 340 aa12.19□□□□□ -0.46
CCDC90B-217ENST00000530253 RNF112Q9ULX5 631 aa12.19□□□□□ -0.46
CCDC90B-217ENST00000530253 CD163L1Q9NR16 1453 aa12.19□□□□□ -0.46
CCDC90B-217ENST00000530253 PPIP5K1Q6PFW1 1433 aa12.19□□□□□ -0.46
CCDC90B-217ENST00000530253 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-217ENST00000530253 HYAL3O43820 417 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-217ENST00000530253 XYLBO75191 536 aa12.18□□□□□ -0.46
CCDC90B-217ENST00000530253 TMF1P82094 1093 aa12.18□□□□□ -0.46
CCDC90B-217ENST00000530253 MAP4K3Q8IVH8 894 aa12.18□□□□□ -0.46
CCDC90B-217ENST00000530253 GHRHP01286 108 aa12.17□□□□□ -0.46
CCDC90B-217ENST00000530253 SOX18P35713 384 aa12.17□□□□□ -0.46
CCDC90B-217ENST00000530253 CACTIN-AS1Q8N1I8 211 aa12.17□□□□□ -0.46
CCDC90B-217ENST00000530253 KRTAP9-2Q9BYQ4 174 aa12.17□□□□□ -0.46
CCDC90B-217ENST00000530253 MRPL18Q9H0U6 180 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-217ENST00000530253 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-217ENST00000530253 TRPM3Q9HCF6 1732 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-217ENST00000530253 DLL1O00548 723 aa12.16□□□□□ -0.46
CCDC90B-217ENST00000530253 PLD4Q96BZ4 506 aa12.16□□□□□ -0.46
CCDC90B-217ENST00000530253 AKTIPQ9H8T0 292 aa12.16□□□□□ -0.46
CCDC90B-217ENST00000530253 CPSF1Q10570 1443 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-217ENST00000530253 NRKQ7Z2Y5 1582 aa12.16□□□□□ -0.46
CCDC90B-217ENST00000530253 DEAF1O75398 565 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 HOXD8P13378 290 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 TMEM132AQ24JP5 1023 aa12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 PRR23CQ6ZRP0 262 aa12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 HFE2Q6ZVN8 426 aa12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 TREML1Q86YW5 311 aa12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 RGL4Q8IZJ4 473 aa12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 CMTR1Q8N1G2 835 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 PMFBP1Q8TBY8 1022 aa12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 NINLQ9Y2I6 1382 aa12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 AKAP12Q02952 1782 aa12.15□□□□□ -0.46
CCDC90B-217ENST00000530253 MON2Q7Z3U7 1717 aa12.14□□□□□ -0.47
CCDC90B-217ENST00000530253 NPHP3Q7Z494 1330 aa12.14□□□□□ -0.47
CCDC90B-217ENST00000530253 SSH2Q76I76 1423 aa12.14□□□□□ -0.47
CCDC90B-217ENST00000530253 LOC102724428A0A0B4J2F2 783 aa12.14□□□□□ -0.47
CCDC90B-217ENST00000530253 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.14□□□□□ -0.47
CCDC90B-217ENST00000530253 OPLAHO14841 1288 aa12.14□□□□□ -0.47
CCDC90B-217ENST00000530253 SIK1P57059 783 aa12.14□□□□□ -0.47
CCDC90B-217ENST00000530253 MEGF10Q96KG7 1140 aa12.14□□□□□ -0.47
CCDC90B-217ENST00000530253 ACEP12821 1306 aa12.13□□□□□ -0.47
CCDC90B-217ENST00000530253 KIF7Q2M1P5 1343 aa12.13□□□□□ -0.47
CCDC90B-217ENST00000530253 USP6P35125 1406 aa12.13□□□□□ -0.47
CCDC90B-217ENST00000530253 LRP6O75581 1613 aa12.13□□□□□ -0.47
CCDC90B-217ENST00000530253 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
CCDC90B-217ENST00000530253 TMEM130Q8N3G9 435 aa12.13□□□□□ -0.47
CCDC90B-217ENST00000530253 MUC3BQ9H195 1237 aa12.13□□□□□ -0.47
CCDC90B-217ENST00000530253 CCDC7Q96M83 1385 aa12.13□□□□□ -0.47
CCDC90B-217ENST00000530253 JCADQ9P266 1359 aa12.13□□□□□ -0.47
CCDC90B-217ENST00000530253 ALS2Q96Q42 1657 aa12.13□□□□□ -0.47
CCDC90B-217ENST00000530253 RFX1P22670 979 aa12.12□□□□□ -0.47
CCDC90B-217ENST00000530253 SWI5Q1ZZU3 235 aa12.12□□□□□ -0.47
CCDC90B-217ENST00000530253 DZIP1LQ8IYY4 767 aaKnown RBP12.12□□□□□ -0.47
CCDC90B-217ENST00000530253 SLC12A5Q9H2X9 1139 aa12.12□□□□□ -0.47
CCDC90B-217ENST00000530253 LRFN2Q9ULH4 789 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms