RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 PRPF40AO75400 957 aaKnown RBP7.8□□□□□ -1.16
AMBRA1-209ENST00000529963 ZNF16P17020 682 aaPredicted RBP7.8□□□□□ -1.16
AMBRA1-209ENST00000529963 ASAP3Q8TDY4 903 aa7.8□□□□□ -1.16
AMBRA1-209ENST00000529963 LIN7BQ9HAP6 207 aa7.8□□□□□ -1.16
AMBRA1-209ENST00000529963 RNF17Q9BXT8 1623 aaKnown RBP7.8□□□□□ -1.16
AMBRA1-209ENST00000529963 MED14O60244 1454 aa7.8□□□□□ -1.16
AMBRA1-209ENST00000529963 ZC3H13Q5T200 1668 aaKnown RBP7.8□□□□□ -1.16
AMBRA1-209ENST00000529963 MYOM3Q5VTT5 1437 aa7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 ABCC3O15438 1527 aa7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 DEPDC5O75140 1603 aa7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 EIF2AK4Q9P2K8 1649 aaKnown RBP7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 PDE2AO00408 941 aaPredicted RBP7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 HOXB4P17483 251 aaPredicted RBP7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 CDC25BP30305 580 aa7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 AFF1P51825 1210 aaKnown RBP7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 GRM2Q14416 872 aa7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 GRIK5Q16478 980 aa7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 NXPE4Q6UWF7 544 aa7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 LRRC4BQ9NT99 713 aa7.79□□□□□ -1.16
AMBRA1-209ENST00000529963 LOC105371045A0A1W2PR82 267 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 LILRB5O75023 590 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 SMNDC1O75940 238 aaKnown RBP eCLIP7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 KIAA0319Q5VV43 1072 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 TCF12Q99081 682 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 BCO2Q9BYV7 579 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 OSBPL7Q9BZF2 842 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 SH2B1Q9NRF2 756 aaPredicted RBP7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 ENAMQ9NRM1 1142 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 FRRS1LQ9P0K9 344 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 ERVK-7P63135 1459 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 VWDEQ8N2E2 1590 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 GRIA4P48058 902 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 DGKGP49619 791 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 SPRED3Q2MJR0 410 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 ZNF326Q5BKZ1 582 aaKnown RBP7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 KANK3Q6NY19 840 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 FBF1Q8TES7 1133 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 SUV39H2Q9H5I1 410 aa7.78□□□□□ -1.16
AMBRA1-209ENST00000529963 SETD1AO15047 1707 aaKnown RBP7.77□□□□□ -1.16
AMBRA1-209ENST00000529963 DUOX2Q9NRD8 1548 aa7.77□□□□□ -1.17
AMBRA1-209ENST00000529963 KIF15Q9NS87 1388 aa7.77□□□□□ -1.17
AMBRA1-209ENST00000529963 INSM1Q01101 510 aaPredicted RBP7.77□□□□□ -1.17
AMBRA1-209ENST00000529963 XPCQ01831 940 aaPredicted RBP7.77□□□□□ -1.17
AMBRA1-209ENST00000529963 TXNDC11Q6PKC3 985 aa7.77□□□□□ -1.17
AMBRA1-209ENST00000529963 TMEM102Q8N9M5 508 aaPredicted RBP7.77□□□□□ -1.17
AMBRA1-209ENST00000529963 GLIS3Q8NEA6 775 aa7.77□□□□□ -1.17
AMBRA1-209ENST00000529963 IQGAP1P46940 1657 aa7.76□□□□□ -1.17
AMBRA1-209ENST00000529963 RBM47A0AV96 593 aaKnown RBP7.76□□□□□ -1.17
AMBRA1-209ENST00000529963 GNA15P30679 374 aa7.76□□□□□ -1.17
AMBRA1-209ENST00000529963 PSMD2Q13200 908 aa7.76□□□□□ -1.17
AMBRA1-209ENST00000529963 COL9A3Q14050 684 aaPredicted RBP7.76□□□□□ -1.17
AMBRA1-209ENST00000529963 CCNJLQ8IV13 435 aa7.76□□□□□ -1.17
AMBRA1-209ENST00000529963 IL22RA1Q8N6P7 574 aa7.76□□□□□ -1.17
AMBRA1-209ENST00000529963 ADAMTS8Q9UP79 889 aa7.76□□□□□ -1.17
AMBRA1-209ENST00000529963 ERBINQ96RT1 1412 aa7.76□□□□□ -1.17
AMBRA1-209ENST00000529963 CNTNAP5Q8WYK1 1306 aa7.76□□□□□ -1.17
AMBRA1-209ENST00000529963 MROH1Q8NDA8 1641 aa7.75□□□□□ -1.17
AMBRA1-209ENST00000529963 UNCXA6NJT0 531 aa7.75□□□□□ -1.17
AMBRA1-209ENST00000529963 FCGRTP55899 365 aa7.75□□□□□ -1.17
AMBRA1-209ENST00000529963 DMRTC2Q8IXT2 367 aaPredicted RBP7.75□□□□□ -1.17
AMBRA1-209ENST00000529963 MUC3BQ9H195 1237 aa7.75□□□□□ -1.17
AMBRA1-209ENST00000529963 ABCB6Q9NP58 842 aa7.75□□□□□ -1.17
AMBRA1-209ENST00000529963 SPG7Q9UQ90 795 aa7.75□□□□□ -1.17
AMBRA1-209ENST00000529963 ARHGAP31Q2M1Z3 1444 aa7.75□□□□□ -1.17
AMBRA1-209ENST00000529963 SCAF11Q99590 1463 aaKnown RBP7.75□□□□□ -1.17
AMBRA1-209ENST00000529963 KANK1Q14678 1352 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 SYNMO15061 1565 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 ABCC5O15440 1437 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 NID1P14543 1247 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 BAG6P46379 1132 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 RBM25P49756 843 aaKnown RBP7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 DAB2P98082 770 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 LINC00114Q6XXX2 140 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 BHLHE41Q9C0J9 482 aaPredicted RBP7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 RRP7BPQ9NSQ0 103 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 EID1Q9Y6B2 187 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 PRDM15P57071 1507 aaPredicted RBP7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 LRRC7Q96NW7 1537 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 CEP152O94986 1710 aa7.74□□□□□ -1.17
AMBRA1-209ENST00000529963 A0A096LPE4 126 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 A0A1W2PPZ6 126 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 PTPRAP18433 802 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 EPHA1P21709 976 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 TTC9Q92623 222 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 TRIM11Q96F44 468 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 C12orf49Q9H741 205 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 PTPN23Q9H3S7 1636 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 TMEM238LA0A1B0GVL6 79 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 LINC01387J3KSC0 135 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 CDC27P30260 824 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 MSL1Q68DK7 614 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 WFDC8Q8IUA0 241 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 MRS2Q9HD23 443 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 AK5Q9Y6K8 562 aa7.73□□□□□ -1.17
AMBRA1-209ENST00000529963 UBR1Q8IWV7 1749 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 SLIT1O75093 1534 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 ANKRD30AQ9BXX3 1397 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 DAPK1P53355 1430 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms