RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 C17orf99Q6UX52 265 aa20.19■□□□□ 0.82
COL16A1-216ENST00000529928 H0YGN5 161 aa20.18■□□□□ 0.82
COL16A1-216ENST00000529928 IFIT1P09914 478 aaKnown RBP20.18■□□□□ 0.82
COL16A1-216ENST00000529928 PUM3Q15397 648 aaKnown RBP20.18■□□□□ 0.82
COL16A1-216ENST00000529928 ANKRD23Q86SG2 305 aa20.18■□□□□ 0.82
COL16A1-216ENST00000529928 ANKRD44Q8N8A2 993 aa20.18■□□□□ 0.82
COL16A1-216ENST00000529928 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.18■□□□□ 0.82
COL16A1-216ENST00000529928 HOXD10P28358 340 aa20.17■□□□□ 0.82
COL16A1-216ENST00000529928 MIGA2Q7L4E1 593 aa20.17■□□□□ 0.82
COL16A1-216ENST00000529928 SRRDQ9UH36 339 aa20.17■□□□□ 0.82
COL16A1-216ENST00000529928 PDHXO00330 501 aa20.16■□□□□ 0.82
COL16A1-216ENST00000529928 INPP5BP32019 993 aa20.16■□□□□ 0.82
COL16A1-216ENST00000529928 PSMC4P43686 418 aa20.16■□□□□ 0.82
COL16A1-216ENST00000529928 NKX2-3Q8TAU0 364 aa20.16■□□□□ 0.82
COL16A1-216ENST00000529928 WDR66Q8TBY9 1149 aa20.16■□□□□ 0.82
COL16A1-216ENST00000529928 FAM151AQ8WW52 585 aa20.16■□□□□ 0.82
COL16A1-216ENST00000529928 TRIM47Q96LD4 638 aa20.16■□□□□ 0.82
COL16A1-216ENST00000529928 CPA4Q9UI42 421 aa20.16■□□□□ 0.82
COL16A1-216ENST00000529928 FGFR2P21802 821 aa20.15■□□□□ 0.82
COL16A1-216ENST00000529928 KLHDC4Q8TBB5 520 aa20.15■□□□□ 0.82
COL16A1-216ENST00000529928 ZNF112Q9UJU3 913 aa20.15■□□□□ 0.82
COL16A1-216ENST00000529928 KCNH4Q9UQ05 1017 aa20.15■□□□□ 0.82
COL16A1-216ENST00000529928 ADGRA2Q96PE1 1338 aa20.14■□□□□ 0.81
COL16A1-216ENST00000529928 ECM2O94769 699 aaPredicted RBP20.14■□□□□ 0.81
COL16A1-216ENST00000529928 OSBPP22059 807 aa20.14■□□□□ 0.81
COL16A1-216ENST00000529928 CTGFP29279 349 aa20.14■□□□□ 0.81
COL16A1-216ENST00000529928 GRK4P32298 578 aa20.14■□□□□ 0.81
COL16A1-216ENST00000529928 MTFR1Q15390 333 aa20.14■□□□□ 0.81
COL16A1-216ENST00000529928 RAET1EQ8TD07 263 aa20.14■□□□□ 0.81
COL16A1-216ENST00000529928 SHISA4Q96DD7 197 aa20.14■□□□□ 0.81
COL16A1-216ENST00000529928 PTPRCP08575 1304 aa20.13■□□□□ 0.81
COL16A1-216ENST00000529928 FMNL1O95466 1100 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-216ENST00000529928 SLC5A1P13866 664 aa20.13■□□□□ 0.81
COL16A1-216ENST00000529928 TCP10Q12799 353 aa20.13■□□□□ 0.81
COL16A1-216ENST00000529928 LPIN2Q92539 896 aa20.13■□□□□ 0.81
COL16A1-216ENST00000529928 MYPNQ86TC9 1320 aa20.12■□□□□ 0.81
COL16A1-216ENST00000529928 NOL9Q5SY16 702 aaKnown RBP20.12■□□□□ 0.81
COL16A1-216ENST00000529928 CHRDL2Q6WN34 429 aa20.12■□□□□ 0.81
COL16A1-216ENST00000529928 DPF3Q92784 378 aa20.12■□□□□ 0.81
COL16A1-216ENST00000529928 PARK7Q99497 189 aaKnown RBP20.12■□□□□ 0.81
COL16A1-216ENST00000529928 DAGLAQ9Y4D2 1042 aa20.12■□□□□ 0.81
COL16A1-216ENST00000529928 MYH13Q9UKX3 1938 aa20.12■□□□□ 0.81
COL16A1-216ENST00000529928 ANP32CO43423 234 aa20.11■□□□□ 0.81
COL16A1-216ENST00000529928 GJB1P08034 283 aa20.11■□□□□ 0.81
COL16A1-216ENST00000529928 GJA8P48165 433 aa20.11■□□□□ 0.81
COL16A1-216ENST00000529928 MOGSQ13724 837 aa20.11■□□□□ 0.81
COL16A1-216ENST00000529928 CDC42EP5Q6NZY7 148 aa20.11■□□□□ 0.81
COL16A1-216ENST00000529928 HTATIP2Q9BUP3 242 aa20.11■□□□□ 0.81
COL16A1-216ENST00000529928 EYA2O00167 538 aa20.1■□□□□ 0.81
COL16A1-216ENST00000529928 CCL5P13501 91 aa20.1■□□□□ 0.81
COL16A1-216ENST00000529928 UBXN2AP68543 259 aa20.1■□□□□ 0.81
COL16A1-216ENST00000529928 DIXDC1Q155Q3 683 aa20.1■□□□□ 0.81
COL16A1-216ENST00000529928 MRPL50Q8N5N7 158 aaKnown RBP20.1■□□□□ 0.81
COL16A1-216ENST00000529928 USP44Q9H0E7 712 aa20.1■□□□□ 0.81
COL16A1-216ENST00000529928 BIN2Q9UBW5 565 aaPredicted RBP20.1■□□□□ 0.81
COL16A1-216ENST00000529928 CXCL11O14625 94 aa20.09■□□□□ 0.81
COL16A1-216ENST00000529928 PRDX5P30044 214 aa20.09■□□□□ 0.81
COL16A1-216ENST00000529928 FCGRTP55899 365 aa20.09■□□□□ 0.81
COL16A1-216ENST00000529928 NFIAQ12857 509 aa20.09■□□□□ 0.81
COL16A1-216ENST00000529928 UBE2Q1Q7Z7E8 422 aa20.09■□□□□ 0.81
COL16A1-216ENST00000529928 RNF208Q9H0X6 261 aa20.09■□□□□ 0.81
COL16A1-216ENST00000529928 CEP290O15078 2479 aa20.08■□□□□ 0.81
COL16A1-216ENST00000529928 LDHBP07195 334 aaKnown RBP20.08■□□□□ 0.81
COL16A1-216ENST00000529928 BCRP11274 1271 aa20.08■□□□□ 0.81
COL16A1-216ENST00000529928 SLAIN1Q8ND83 568 aa20.08■□□□□ 0.81
COL16A1-216ENST00000529928 RBM27Q9P2N5 1060 aaKnown RBP20.08■□□□□ 0.81
COL16A1-216ENST00000529928 FAM198AQ9UFP1 575 aa20.08■□□□□ 0.81
COL16A1-216ENST00000529928 AK9Q5TCS8 1911 aa20.08■□□□□ 0.8
COL16A1-216ENST00000529928 RFX5P48382 616 aaPredicted RBP20.07■□□□□ 0.8
COL16A1-216ENST00000529928 PRKCZQ05513 592 aa20.07■□□□□ 0.8
COL16A1-216ENST00000529928 GPAT2Q6NUI2 795 aa20.07■□□□□ 0.8
COL16A1-216ENST00000529928 USP40Q9NVE5 1235 aa20.07■□□□□ 0.8
COL16A1-216ENST00000529928 GNL3LQ9NVN8 582 aaKnown RBP20.07■□□□□ 0.8
COL16A1-216ENST00000529928 TRIOBPQ9H2D6 2365 aa20.07■□□□□ 0.8
COL16A1-216ENST00000529928 SALL1Q9NSC2 1324 aa20.06■□□□□ 0.8
COL16A1-216ENST00000529928 CYP2C8P10632 490 aa20.06■□□□□ 0.8
COL16A1-216ENST00000529928 FASTKD5Q7L8L6 764 aaKnown RBP20.06■□□□□ 0.8
COL16A1-216ENST00000529928 FAM9BQ8IZU0 186 aa20.06■□□□□ 0.8
COL16A1-216ENST00000529928 FBXO3Q9UK99 471 aa20.06■□□□□ 0.8
COL16A1-216ENST00000529928 NR2E3Q9Y5X4 410 aa20.06■□□□□ 0.8
COL16A1-216ENST00000529928 ATG9AQ7Z3C6 839 aa20.05■□□□□ 0.8
COL16A1-216ENST00000529928 SCYL3Q8IZE3 742 aa20.05■□□□□ 0.8
COL16A1-216ENST00000529928 U2AF1L4Q8WU68 220 aaKnown RBP20.05■□□□□ 0.8
COL16A1-216ENST00000529928 PICK1Q9NRD5 415 aa20.05■□□□□ 0.8
COL16A1-216ENST00000529928 ZHX2Q9Y6X8 837 aa20.05■□□□□ 0.8
COL16A1-216ENST00000529928 ZNF521Q96K83 1311 aa20.04■□□□□ 0.8
COL16A1-216ENST00000529928 A0A0G2JLL6 359 aaPredicted RBP20.04■□□□□ 0.8
COL16A1-216ENST00000529928 SEMA3EO15041 775 aa20.04■□□□□ 0.8
COL16A1-216ENST00000529928 ENTPD3O75355 529 aa20.04■□□□□ 0.8
COL16A1-216ENST00000529928 ATP2B3Q16720 1220 aa20.04■□□□□ 0.8
COL16A1-216ENST00000529928 PRRT2Q7Z6L0 340 aaPredicted RBP20.04■□□□□ 0.8
COL16A1-216ENST00000529928 IDI2Q9BXS1 227 aa20.04■□□□□ 0.8
COL16A1-216ENST00000529928 DENND2AQ9ULE3 1009 aa20.04■□□□□ 0.8
COL16A1-216ENST00000529928 SLC45A1Q9Y2W3 748 aa20.04■□□□□ 0.8
COL16A1-216ENST00000529928 ATRNL1Q5VV63 1379 aa20.04■□□□□ 0.8
COL16A1-216ENST00000529928 PHF20L1A8MW92 1017 aa20.03■□□□□ 0.8
COL16A1-216ENST00000529928 CIAO1O76071 339 aa20.03■□□□□ 0.8
COL16A1-216ENST00000529928 FARP2O94887 1054 aaPredicted RBP20.03■□□□□ 0.8
COL16A1-216ENST00000529928 CAPN2P17655 700 aa20.03■□□□□ 0.8
COL16A1-216ENST00000529928 ZFPM1Q8IX07 1006 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms